chr12 : 27,017,324 – 27,017,851
527 bp 96 TFs 2 linked genes
This 527 bp open chromatin element is linked to TM7SF3 and MED21 and is bound by 96 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TM7SF3 3.0 kb Proximal Proximity
MED21 4.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:27,012,324 – 27,022,851
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 209 bp overlap
ChIP K562 ENCFF938UXQ 515 bp overlap
ATF1 2 datasets
ChIP K562 ENCFF817JQF 504 bp overlap
ChIP K562 ENCFF817JQF 500 bp overlap
ATF3 1 dataset
ChIP K562 ENCFF921JQW 156 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 179 bp overlap
CBFA2T2 3 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 89 bp overlap
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 212 bp overlap
ChIP K562 ENCFF963TXY 448 bp overlap
CBFA2T3 5 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 124 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 83 bp overlap
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 256 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 189 bp overlap
ChIP K562 ENCFF673OEZ 527 bp overlap
CC2D1A 1 dataset
ChIP K562 ENCFF567XUT 445 bp overlap
CCNT2 1 dataset
ChIP K562 ENCFF199GSZ 339 bp overlap
CREB1 1 dataset
ChIP K562 ENCFF175LMX 347 bp overlap
CREM 1 dataset
ChIP K562 ENCFF180STA 301 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 527 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 424 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 296 bp overlap
ChIP BLaER1 ENCFF335XTP 251 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 397 bp overlap
DPF2 4 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 144 bp overlap
ChIP K562 ENCFF739JDE 497 bp overlap
ChIP K562 ENCFF775HUO 151 bp overlap
ChIP K562 ENCFF775HUO 383 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 145 bp overlap
ChIP K562 ENCFF622HMZ 439 bp overlap
ELF1 1 dataset
ChIP K562 ENCFF886KFV 527 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 317 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 489 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 134 bp overlap
FOXA1 1 dataset
ChIP HepG2 ENCFF740VZW 149 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR508DQA.FOXK2.K-562 65 bp overlap
FOXM1 1 dataset
ChIP K562 ENCFF255RHV 242 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF996TSW 255 bp overlap
GATA1 3 datasets
ChIP erythroblast ENCFF867JAR 59 bp overlap
ChIP erythroblast ENCFF867JAR 527 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 271 bp overlap
GATA2 5 datasets
ChIP K562 ENCFF088XQT 411 bp overlap
ChIP K562 ENCFF513FTZ 301 bp overlap
ChIP K562 ENCFF544PCK 200 bp overlap
ChIP K562 ENCFF830LLA 362 bp overlap
ChIP K562 ENCFF830LLA 527 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 388 bp overlap
ChIP DE DE-GATA4-2 268 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 281 bp overlap
ChIP DE DE-GATA6-2 434 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 280 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 110 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 205 bp overlap
ChIP K562 ENCFF928TKZ 255 bp overlap
ChIP K562 ENCFF968WBH 286 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 231 bp overlap
ChIP K562 ENCFF744ALD 346 bp overlap
ChIP K562 ENCFF919OMP 221 bp overlap
HDAC3 1 dataset
ChIP K562 ENCFF713GIR 448 bp overlap
HMBOX1 4 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 179 bp overlap
ChIP K562 ENCFF055GAZ 336 bp overlap
ChIP K562 ENCFF317JJX 304 bp overlap
ChIP K562 ENCFF317JJX 388 bp overlap
HMG20A 2 datasets
ChIP K562 ENCFF840WDB 304 bp overlap
ChIP K562 ENCFF840WDB 506 bp overlap
IKZF1 3 datasets
ChIP K562 ENCFF348IBL 214 bp overlap
ChIP K562 ENCFF771OHZ 282 bp overlap
ChIP K562 ENCFF771OHZ 468 bp overlap
JUND 2 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 124 bp overlap
ChIP K562 ENCFF830LVJ 281 bp overlap
KDM1A 6 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 208 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 168 bp overlap
ChIP K562 ENCFF128TYE 360 bp overlap
ChIP K562 ENCFF133OLU 332 bp overlap
ChIP K562 ENCFF934ZRG 417 bp overlap
ChIP K562 ENCFF934ZRG 405 bp overlap
KLF16 1 dataset
ChIP K562 ENCFF464PIV 129 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 161 bp overlap
ChIP K562 ENCFF320EQC 200 bp overlap
LCOR 1 dataset
ChIP K562 ENCFF340MHH 489 bp overlap
LDB1 2 datasets
ChIP K-562 GSE142227.LDB1.K-562 68 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 189 bp overlap
LEF1 1 dataset
ChIP K562 ENCFF198WCP 444 bp overlap
MAX 2 datasets
ChIP K562 ENCFF110LJS 351 bp overlap
ChIP K562 ENCFF524IJO 397 bp overlap
MAZ 2 datasets
ChIP K562 ENCFF809XHP 510 bp overlap
ChIP K562 ENCFF982GSZ 501 bp overlap
MEIS2 1 dataset
ChIP K562 ENCFF320GSD 360 bp overlap
MNT 2 datasets
ChIP K562 ENCFF820IGH 505 bp overlap
ChIP K562 ENCFF820IGH 305 bp overlap
MTA2 1 dataset
ChIP K562 ENCFF880VZB 341 bp overlap
MTA3 1 dataset
ChIP K562 ENCFF289UFB 514 bp overlap
MYC 1 dataset
ChIP K562 ENCFF988ZRU 437 bp overlap
MYNN 1 dataset
ChIP K562 ENCFF399UNK 365 bp overlap
NBN 1 dataset
ChIP K562 ENCFF146YTY 377 bp overlap
NCOA1 2 datasets
ChIP K562 ENCFF395XLS 419 bp overlap
ChIP K562 ENCFF962VHQ 451 bp overlap
NCOR1 5 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 82 bp overlap
ChIP K-562 ENCSR798ILC.NCOR1.K-562 254 bp overlap
ChIP K562 ENCFF359DNT 411 bp overlap
ChIP K562 ENCFF788MPU 425 bp overlap
ChIP K562 ENCFF866HRM 475 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR000FCC.NFE2.K-562 121 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 391 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 197 bp overlap
ChIP K562 ENCFF167YID 481 bp overlap
NR2F2 1 dataset
ChIP K562 ENCFF004YPK 356 bp overlap
NRF1 2 datasets
ChIP K562 ENCFF689EWI 371 bp overlap
ChIP K562 ENCFF791UHF 392 bp overlap
PBX2 2 datasets
ChIP K562 ENCFF286KMN 417 bp overlap
ChIP K562 ENCFF286KMN 291 bp overlap
PHF21A 1 dataset
ChIP K562 ENCFF088QME 314 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 94 bp overlap
ChIP K562 ENCFF236IUS 391 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF514URW 115 bp overlap
PRDM10 1 dataset
ChIP K562 ENCFF740YLK 216 bp overlap
RAD21 2 datasets
ChIP K562 ENCFF066JWO 383 bp overlap
ChIP K562 ENCFF634XYR 335 bp overlap
RCOR1 2 datasets
ChIP K562 ENCFF216EEJ 297 bp overlap
ChIP K562 ENCFF721RTS 345 bp overlap
RNF2 2 datasets
ChIP K562 ENCFF653BQJ 290 bp overlap
ChIP K562 ENCFF653BQJ 527 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 197 bp overlap
SMARCA4 2 datasets
ChIP K562 ENCFF316MCJ 463 bp overlap
ChIP K562 ENCFF506JCB 285 bp overlap
SMARCE1 1 dataset
ChIP K562 ENCFF690CFF 130 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 254 bp overlap
SOX6 1 dataset
ChIP K562 ENCFF059YCJ 352 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 82 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 129 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 140 bp overlap
STAT1 3 datasets
ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 288 bp overlap
ChIP K-562 ENCSR000EHJ.STAT1.K-562 202 bp overlap
ChIP K-562 ENCSR000EHK.STAT1.K-562 177 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 332 bp overlap
TAF9B 2 datasets
ChIP K562 ENCFF121ZIF 473 bp overlap
ChIP K562 ENCFF121ZIF 360 bp overlap
TAL1 9 datasets
ChIP K-562 GSE107726.TAL1.K-562 108 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 87 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 202 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 53 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 75 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 50 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 78 bp overlap
ChIP K562 ENCFF620GMX 440 bp overlap
ChIP K562 ENCFF661CCK 136 bp overlap
TBL1XR1 1 dataset
ChIP K562 ENCFF899VEC 331 bp overlap
TCF12 3 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 70 bp overlap
ChIP K562 ENCFF909RDY 190 bp overlap
ChIP K562 ENCFF931DJY 443 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 160 bp overlap
ChIP K562 ENCFF319QZT 209 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF465AQA 297 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 297 bp overlap
TRIM24 4 datasets
ChIP K562 ENCFF284DKY 263 bp overlap
ChIP K562 ENCFF284DKY 381 bp overlap
ChIP K562 ENCFF616RIL 270 bp overlap
ChIP K562 ENCFF616RIL 451 bp overlap
TRIM28 1 dataset
ChIP K562 ENCFF172UPN 358 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 438 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF911VPU 241 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 129 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 72 bp overlap
ZEB2 2 datasets
ChIP K562 ENCFF795CMH 477 bp overlap
ChIP K562 ENCFF975RXS 461 bp overlap
ZFP91 2 datasets
ChIP K562 ENCFF501CDP 386 bp overlap
ChIP K562 ENCFF501CDP 186 bp overlap
ZNF24 1 dataset
ChIP K562 ENCFF615YYW 352 bp overlap
ZNF274 1 dataset
ChIP K562 ENCFF187RMG 527 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 232 bp overlap
ZNF282 1 dataset
ChIP K562 ENCFF657WOV 290 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 159 bp overlap
ZNF644 1 dataset
ChIP K562 ENCFF290PDB 527 bp overlap
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