chr9 : 89,677,983 – 89,678,537
554 bp 119 TFs 1 linked gene
This 554 bp open chromatin element is linked to SEMA4D and is bound by 119 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SEMA4D 180.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:89,672,983 – 89,683,537
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
119 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 554 bp overlap
ASCL1 7 datasets
ChIP NCI-H128 GSE69394.ASCL1.NCI-H128 554 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 145 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 162 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 155 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 115 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 145 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 554 bp overlap
ASH2L 4 datasets
ChIP H1 ENCFF399KAM 522 bp overlap
ChIP H1 ENCFF399KAM 554 bp overlap
ChIP H1 ENCFF399KAM 375 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 554 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 554 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 302 bp overlap
ATF2 4 datasets
ChIP H1 ENCFF295GZO 323 bp overlap
ChIP H1 ENCFF295GZO 482 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 154 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 227 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 88 bp overlap
BCL11A 2 datasets
ChIP WA01 ENCSR000BIP.BCL11A.WA01 133 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 138 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 554 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 495 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 554 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 196 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 75 bp overlap
BRD4 27 datasets
ChIP BE2C GSE80151.BRD4.BE2C 289 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 135 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 79 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 206 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 110 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 50 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 159 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 201 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 121 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 376 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 554 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 289 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 227 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 178 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 171 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 337 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 202 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 145 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 532 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 189 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP hESC GSE33281.BRD4.hESC 76 bp overlap
ChIP hESC GSE33281.BRD4.hESC 54 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 229 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 319 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 169 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 548 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 162 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 289 bp overlap
CEBPB 2 datasets
ChIP MV4-11 GSE88746.CEBPB.MV4-11 65 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 107 bp overlap
CHD2 3 datasets
ChIP SK-N-SH ENCFF669KMB 277 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 178 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 138 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 396 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 545 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 243 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 554 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 191 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 554 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 114 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 554 bp overlap
CTCF 3 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 554 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 318 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 57 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 173 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 405 bp overlap
EP300 8 datasets
ChIP H1 ENCFF927IYK 238 bp overlap
ChIP Ishikawa ENCFF364ZWT 279 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 118 bp overlap
ChIP SK-N-SH ENCFF829RWA 300 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 219 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 518 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 95 bp overlap
ChIP hESC GSE17917.EP300.hESC 452 bp overlap
ESR1 7 datasets
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 393 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 104 bp overlap
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 97 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 444 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 554 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 174 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 325 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 189 bp overlap
EZH2 2 datasets
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 554 bp overlap
ChIP neural progenitor cell ENCFF018MKA 501 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 466 bp overlap
FOXA1 17 datasets
ChIP Ishikawa ENCSR000BKW.FOXA1.Ishikawa 101 bp overlap
ChIP LNCaP-C4-2B GSE40050.FOXA1.LNCaP-C4-2B 155 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 139 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 154 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 142 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 134 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 91 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 75 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 57 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 96 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 102 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 151 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 129 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 162 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 84 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 92 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 266 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 240 bp overlap
ChIP DE DE-FOXA2-2 262 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 176 bp overlap
FOXO1-PAX3 3 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 449 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 205 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 243 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 400 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 154 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 247 bp overlap
ChIP SK-N-SH ENCFF764OZD 312 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 175 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 529 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 554 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 153 bp overlap
HDAC2 5 datasets
ChIP H1 ENCFF939VKA 164 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 391 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 554 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 258 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 554 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 366 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 101 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 554 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 554 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 554 bp overlap
JUND 2 datasets
ChIP WA01 ENCSR000BKP.JUND.WA01 105 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 181 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 519 bp overlap
MAX 6 datasets
ChIP H1 ENCFF601FOM 255 bp overlap
ChIP H1 ENCFF914VQY 199 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 142 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 208 bp overlap
ChIP WTC11 ENCFF223QFY 328 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 169 bp overlap
MED1 2 datasets
ChIP RH4 GSE83726.MED1.RH4 554 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 469 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 554 bp overlap
MXI1 5 datasets
ChIP H1 ENCFF963FZS 229 bp overlap
ChIP H1 ENCFF963FZS 337 bp overlap
ChIP SK-N-SH ENCFF746HVJ 367 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 182 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 157 bp overlap
MYC 6 datasets
ChIP H1 ENCFF794ZJT 214 bp overlap
ChIP NB69 GSE138295.MYC.NB69 554 bp overlap
ChIP NCI-H128 GSE41105.MYC.NCI-H128 236 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 554 bp overlap
ChIP NCI-H2171 GSE41105.MYC.NCI-H2171 204 bp overlap
ChIP WA01 ENCSR000EBY.MYC.WA01 151 bp overlap
MYCN 6 datasets
ChIP BE2C GSE80151.MYCN.BE2C 280 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 229 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 192 bp overlap
ChIP NGP GSE80151.MYCN.NGP 183 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 334 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 280 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 418 bp overlap
MYOD1 6 datasets
ChIP RD GSE137168.MYOD1.RD 473 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 461 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 554 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 471 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 98 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 406 bp overlap
MYOG 4 datasets
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 553 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 497 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 372 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 364 bp overlap
NANOG 15 datasets
ChIP GM23338 ENCFF065NZG 145 bp overlap
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 135 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 259 bp overlap
ChIP H1 ENCFF747ZPQ 157 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 554 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 554 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 554 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 554 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 554 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 554 bp overlap
ChIP hESC GSE18292.NANOG.hESC 131 bp overlap
ChIP hESC GSE20650.NANOG.hESC 152 bp overlap
ChIP hESC GSE20650.NANOG.hESC 282 bp overlap
ChIP hESC GSE18292.NANOG.hESC 165 bp overlap
NEUROD1 3 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 554 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 238 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 167 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 436 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 554 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 554 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 554 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 554 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 554 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 281 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 391 bp overlap
NIPBL 5 datasets
ChIP WA09 GSE105028.NIPBL.WA09 420 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 484 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 203 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 188 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 190 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 284 bp overlap
OLIG2 5 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 203 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 212 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 219 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 213 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 221 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 237 bp overlap
PAX3-FOXO1 2 datasets
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 183 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 410 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 554 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 307 bp overlap
POU4F2 2 datasets
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 140 bp overlap
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 302 bp overlap
POU5F1 24 datasets
ChIP BG03 GSE21614.POU5F1.BG03 126 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 186 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 105 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 118 bp overlap
ChIP GM23338 ENCFF333SNB 135 bp overlap
ChIP GM23338 ENCFF333SNB 174 bp overlap
ChIP H1 ENCFF698ZAP 178 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 481 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 554 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 185 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 70 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 125 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 211 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 205 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 313 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 147 bp overlap
ChIP hESC GSE20650.POU5F1.hESC 82 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 294 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 554 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 156 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 303 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 117 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 270 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR362VCG.POU5F1.neuron_bipolar_doxy_4d 85 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 144 bp overlap
RAD21 9 datasets
ChIP H1 ENCFF967OJF 228 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 554 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 554 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 554 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 554 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 86 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 224 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 229 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 554 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 554 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 363 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 352 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 225 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 167 bp overlap
RBPJ 3 datasets
ChIP GIC GSE79734.RBPJ.GIC 157 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 554 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 554 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 276 bp overlap
REST 1 dataset
ChIP GM23338 ENCSR871KYB.REST.GM23338 88 bp overlap
RFX5 1 dataset
ChIP SK-N-SH ENCFF755HLO 267 bp overlap
RNF2 5 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 554 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 403 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 195 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 100 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 521 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 202 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 205 bp overlap
RYBP 2 datasets
ChIP WA01 GSE104690.RYBP.WA01 230 bp overlap
ChIP WA01 GSE104690.RYBP.WA01 119 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 554 bp overlap
SAP30 2 datasets
ChIP H1 ENCFF149IOE 331 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 242 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 333 bp overlap
ChIP H1 ENCFF896IJG 182 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 495 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 451 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 396 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 222 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 265 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SIX5 1 dataset
ChIP WA01 ENCSR000BIQ.SIX5.WA01 123 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 554 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 232 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 362 bp overlap
SMAD2_3 2 datasets
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 416 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 554 bp overlap
SMAD3 8 datasets
ChIP BG03 GSE21614.SMAD3.BG03 135 bp overlap
ChIP BG03 GSE21614.SMAD3.BG03 290 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 554 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 160 bp overlap
ChIP WTC11 ENCFF815YYQ 103 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 182 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 222 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 76 bp overlap
SMARCA4 7 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 179 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 391 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 254 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 554 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 296 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 554 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 554 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 539 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 554 bp overlap
SMARCC1 5 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 554 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 166 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 253 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 554 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 554 bp overlap
SMC1 1 dataset
ChIP HAP1 GSE94992.SMC1.HAP1 94 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 398 bp overlap
SOX2 13 datasets
ChIP H9 GSE46837.SOX2.H9 554 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 554 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 218 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 520 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 211 bp overlap
ChIP hESC GSE69479.SOX2.hESC 554 bp overlap
ChIP hESC GSE18292.SOX2.hESC 151 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 554 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 517 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 439 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 311 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 495 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 548 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 554 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 203 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 353 bp overlap
SOX8 3 datasets
ChIP RH4 GSE116344.SOX8.RH4 455 bp overlap
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 234 bp overlap
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 477 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 252 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 554 bp overlap
ChIP WTC11 ENCFF688PEU 356 bp overlap
SRF 1 dataset
ChIP WA01 ENCSR000BIV.SRF.WA01 163 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 191 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 135 bp overlap
TCF12 7 datasets
ChIP H1 ENCFF203EBH 177 bp overlap
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP Ishikawa ENCFF467DDW 106 bp overlap
ChIP Ishikawa ENCFF467DDW 471 bp overlap
ChIP Ishikawa ENCFF467DDW 53 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 384 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 554 bp overlap
TCF3 2 datasets
ChIP 697_HF GSE138031.TCF3.697_HF 126 bp overlap
ChIP NPC GSE154479.TCF3.NPC 554 bp overlap
TCF4 2 datasets
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 206 bp overlap
ChIP SK-N-SH ENCFF270OWF 302 bp overlap
TEAD4 5 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 554 bp overlap
ChIP H1 ENCFF778PAX 156 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 143 bp overlap
ChIP WTC11 ENCFF114TZS 136 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 156 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 286 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 453 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 355 bp overlap
ChIP AF22 GSE84259.TRIM28.AF22 81 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 554 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 554 bp overlap
USF1 5 datasets
ChIP H1 ENCFF090WVU 127 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 205 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 383 bp overlap
ChIP WTC11 ENCFF699QGS 94 bp overlap
ChIP WTC11 ENCFF699QGS 315 bp overlap
USF2 2 datasets
ChIP WA01 ENCSR000ECD.USF2.WA01 207 bp overlap
ChIP WTC11 ENCFF139JAW 310 bp overlap
YY1 3 datasets
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 190 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 162 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 451 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 213 bp overlap
ZBTB7A 1 dataset
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 175 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 263 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 83 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 226 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 288 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 487 bp overlap
ZNF219 1 dataset
ChIP WTC11 ENCFF998WKU 299 bp overlap
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