chr8 : 41,529,665 41,529,875
210 bp 110 TFs 1 linked gene
This 210 bp open chromatin element is linked to GINS4 and is bound by 110 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GINS4 439 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:41,524,665 – 41,534,875
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
110 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K562 ENCFF583EEH 85 bp overlap
AKAP8 1 dataset
ChIP HepG2 ENCFF478OVI 71 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 210 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 82 bp overlap
ChIP HepG2 ENCFF207QHL 207 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 210 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 210 bp overlap
BCL11A 1 dataset
ChIP GM12878 ENCFF717YPR 82 bp overlap
BCOR 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 89 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 201 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 210 bp overlap
ChIP RKO GSE47190.BRD1.RKO 147 bp overlap
BRD2 4 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 104 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 117 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 88 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 167 bp overlap
BRD4 7 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 81 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 71 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 74 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 115 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 151 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 72 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 210 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCFF056JUS 92 bp overlap
CHD1 4 datasets
ChIP H1 ENCFF998XEK 167 bp overlap
ChIP H1 ENCFF998XEK 210 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 90 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 173 bp overlap
CREB1 1 dataset
ChIP HepG2 ENCFF576ERP 57 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 140 bp overlap
ChIP K562 ENCFF180STA 210 bp overlap
CTCF 6 datasets
ChIP GM04604 GSE148179.CTCF.GM04604 110 bp overlap
ChIP GM13977 ENCFF528ESQ 153 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 206 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 103 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 65 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 118 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 105 bp overlap
E2F1 2 datasets
ChIP K-562 ENCSR720HUL.E2F1.K-562 210 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 139 bp overlap
E2F4 1 dataset
ChIP WTC11 ENCFF574OKJ 118 bp overlap
E2F6 2 datasets
ChIP HeLa-S3 ENCFF766OCY 138 bp overlap
ChIP HeLa-S3 ENCFF766OCY 191 bp overlap
E2F8 2 datasets
ChIP GM12878 ENCFF910KAC 69 bp overlap
ChIP HepG2 ENCFF117UYU 61 bp overlap
EED 2 datasets
ChIP HepG2 ENCFF347CCA 142 bp overlap
ChIP HepG2 ENCFF347CCA 210 bp overlap
ELF1 1 dataset
ChIP K562 ENCFF457KVR 160 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 102 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 210 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 118 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 202 bp overlap
GATA4 1 dataset
ChIP HepG2 ENCFF309FOQ 61 bp overlap
GMEB1 1 dataset
ChIP Hep-G2 ENCSR780OXL.GMEB1.Hep-G2 210 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 139 bp overlap
GTF3C2 3 datasets
ChIP H9 GSE94418.GTF3C2.H9 175 bp overlap
ChIP HeLa-S3 ENCFF144RTV 62 bp overlap
ChIP T98G GSE120162.GTF3C2.T98G 131 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 91 bp overlap
ChIP K562 ENCFF872AQB 177 bp overlap
ChIP K562 ENCFF928TKZ 102 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 199 bp overlap
HDAC2 1 dataset
ChIP K562 ENCFF919OMP 106 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 210 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 210 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 105 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 137 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 199 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 96 bp overlap
KAT7 2 datasets
ChIP MOLM-13 GSE133516.KAT7.MOLM-13 129 bp overlap
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 210 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 193 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 91 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 111 bp overlap
KDM5A 1 dataset
ChIP HepG2 ENCFF105YGO 70 bp overlap
KMT2A 5 datasets
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 210 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 201 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 205 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 210 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 210 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 174 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 210 bp overlap
MED1 4 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 210 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 144 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 74 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 130 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 121 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 210 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 210 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 210 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 201 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 210 bp overlap
NKRF 1 dataset
ChIP K562 ENCFF815TQL 168 bp overlap
PHF20 3 datasets
ChIP HepG2 ENCFF609JBM 54 bp overlap
ChIP HepG2 ENCFF609JBM 210 bp overlap
ChIP K562 ENCFF436SIT 112 bp overlap
PHF21A 1 dataset
ChIP HepG2 ENCFF525EUW 160 bp overlap
PHF8 3 datasets
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF892HVG 201 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 134 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 131 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 162 bp overlap
PML 1 dataset
ChIP K562 ENCFF801LKH 87 bp overlap
POLR2A 3 datasets
ChIP K562 ENCFF419GHN 55 bp overlap
ChIP esophagus muscularis mucosa ENCFF432ZCY 99 bp overlap
ChIP transverse colon ENCFF193UMS 129 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 127 bp overlap
RAD21 3 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 83 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 127 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 160 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 115 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 112 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 190 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 190 bp overlap
RELA 2 datasets
ChIP GM12878 ENCSR664POU.RELA.GM12878 80 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 174 bp overlap
REST 1 dataset
ChIP HL-60 ENCFF589LOF 60 bp overlap
SAFB2 1 dataset
ChIP HepG2 ENCFF196QOW 96 bp overlap
SAP30 1 dataset
ChIP K562 ENCFF652WJB 159 bp overlap
SIN3A 3 datasets
ChIP GM12878 ENCFF238GUI 51 bp overlap
ChIP H1 ENCFF042ZSL 117 bp overlap
ChIP K562 ENCFF984TCS 65 bp overlap
SMARCA4 7 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 107 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 87 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 210 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 187 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 210 bp overlap
ChIP K562 ENCFF506JCB 210 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 75 bp overlap
SMARCB1 3 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 89 bp overlap
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 82 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 137 bp overlap
SMC3 2 datasets
ChIP GP5D GSE51234.SMC3.GP5D 165 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 77 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 210 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 86 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 210 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 128 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 140 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 147 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 153 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 210 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF254RJL 148 bp overlap
TFDP1 2 datasets
ChIP K562 ENCFF794ZXJ 201 bp overlap
ChIP K562 ENCFF794ZXJ 210 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 117 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 72 bp overlap
THAP9 1 dataset
ChIP HepG2 ENCFF687WSR 102 bp overlap
TSC22D1 1 dataset
ChIP HepG2 ENCFF357KSA 171 bp overlap
YAP1 1 dataset
ChIP OVCAR-5 GSE57236.YAP1.OVCAR-5 171 bp overlap
YY1 1 dataset
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 210 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 52 bp overlap
ChIP K562 ENCFF215OUF 67 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 64 bp overlap
ChIP HEK293 ENCFF865LIO 210 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 210 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 139 bp overlap
ZBTB26 1 dataset
ChIP HEK293 ENCFF752TCU 206 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCFF191NFH 117 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 91 bp overlap
ZC3H8 1 dataset
ChIP HCT-116 GSE47938.ZC3H8.HCT-116 137 bp overlap
ZFP91 3 datasets
ChIP HepG2 ENCFF012CME 75 bp overlap
ChIP HepG2 ENCFF012CME 210 bp overlap
ChIP K562 ENCFF501CDP 107 bp overlap
ZFX 5 datasets
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 138 bp overlap
ChIP K562 ENCFF169LZT 116 bp overlap
ChIP K562 ENCFF536AJO 75 bp overlap
ChIP K562 ENCFF536AJO 210 bp overlap
ChIP K562 ENCFF536AJO 210 bp overlap
ZNF121 1 dataset
ChIP HEK293 ENCFF839FUF 137 bp overlap
ZNF138 1 dataset
ChIP HepG2 ENCFF770NCL 136 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 210 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 210 bp overlap
ZNF391 1 dataset
ChIP HEK293 ENCFF835SNY 89 bp overlap
ZNF431 1 dataset
ChIP K562 ENCFF431VZH 83 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCFF282RUS 80 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 210 bp overlap
ZNF747 1 dataset
ChIP HepG2 ENCFF528MQU 106 bp overlap
ZNF784 1 dataset
ChIP HepG2 ENCFF265UCH 105 bp overlap
ZSCAN21 1 dataset
ChIP HEK293 ENCFF582WUP 167 bp overlap
ZSCAN31 1 dataset
ChIP HepG2 ENCFF066FRL 166 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 210 bp overlap