chr7 : 76,049,172 76,049,650
478 bp 136 TFs 2 linked genes
This 478 bp open chromatin element is linked to MDH2 and STYXL1 and is bound by 136 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MDH2 1.1 kb Proximal Proximity
STYXL1 1.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:76,044,172 – 76,054,650
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
136 transcription factors
Source
Cell type
AR 10 datasets
ChIP LNCaP ERP003503.AR.LNCaP 200 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 226 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 157 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 183 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 254 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 320 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 127 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 346 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 288 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 412 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 235 bp overlap
ChIP K562 ENCFF938UXQ 446 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 152 bp overlap
Ar 1 dataset
Motif DE_72h DE_72h-Ar_MA0007.4 16 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 244 bp overlap
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 337 bp overlap
ChIP K562 ENCFF673OEZ 264 bp overlap
CC2D1A 1 dataset
ChIP K562 ENCFF567XUT 360 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 131 bp overlap
CHD1 1 dataset
ChIP K-562 ENCSR000AQD.CHD1.K-562 81 bp overlap
CHD2 3 datasets
ChIP GM12878 ENCFF697XCL 290 bp overlap
ChIP K-562 ENCSR000EHD.CHD2.K-562 202 bp overlap
ChIP K562 ENCFF857WME 200 bp overlap
CSDE1 1 dataset
ChIP K562 ENCFF313FYC 418 bp overlap
CTCF 2 datasets
ChIP DOHH2 ENCFF637WNW 65 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 210 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 242 bp overlap
ChIP K562 ENCFF739JDE 385 bp overlap
ChIP K562 ENCFF775HUO 265 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 139 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 204 bp overlap
ChIP K562 ENCFF053BWO 329 bp overlap
ELF1 2 datasets
ChIP K562 ENCFF245JDF 339 bp overlap
ChIP K562 ENCFF245JDF 128 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF200OMJ 311 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 241 bp overlap
ETS1 1 dataset
ChIP K562 ENCFF688UQG 264 bp overlap
ETV1 2 datasets
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 249 bp overlap
ChIP GIST-T1 GSE80443.ETV1.GIST-T1 162 bp overlap
FOXA1 17 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 164 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 168 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 390 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 200 bp overlap
ChIP HepG2 ENCFF207NVJ 223 bp overlap
ChIP HepG2 ENCFF740VZW 258 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 225 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 265 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 134 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 122 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 344 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 272 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 221 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 329 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 191 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 166 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 238 bp overlap
FOXA2 8 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 355 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 348 bp overlap
ChIP DE DE-FOXA2-1 478 bp overlap
ChIP DE DE-FOXA2-2 478 bp overlap
ChIP HepG2 ENCFF533COJ 269 bp overlap
ChIP HepG2 ENCFF570ABM 154 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 176 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 262 bp overlap
FOXA3 2 datasets
ChIP HepG2 ENCFF005KGL 321 bp overlap
ChIP HepG2 ENCFF005KGL 121 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 331 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR302AWT.FOXK2.K-562 280 bp overlap
ChIP K562 ENCFF245WKP 121 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 91 bp overlap
GATA2 1 dataset
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 478 bp overlap
ChIP DE DE-GATA4-2 478 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 457 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 378 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 478 bp overlap
ChIP DE DE-GATA6-2 478 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP foregut GSE117136.GATA6.foregut 331 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 397 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 258 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HBP1 1 dataset
ChIP K562 ENCFF882TEV 305 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 222 bp overlap
ChIP K562 ENCFF928TKZ 364 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 301 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 327 bp overlap
ChIP K562 ENCFF744ALD 153 bp overlap
HDGF 5 datasets
ChIP GM12878 ENCFF653WYI 124 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 437 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 310 bp overlap
ChIP K562 ENCFF195BET 408 bp overlap
ChIP K562 ENCFF682FBH 173 bp overlap
HLTF 1 dataset
ChIP K562 ENCFF783OCM 362 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 261 bp overlap
JUN 1 dataset
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 289 bp overlap
JUNB 2 datasets
ChIP HepG2 ENCFF133OUQ 402 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 400 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 404 bp overlap
KDM1A 3 datasets
ChIP K562 ENCFF128TYE 405 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 327 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 267 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 74 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 95 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 179 bp overlap
MAX 1 dataset
ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 83 bp overlap
MLLT1 3 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 478 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 175 bp overlap
ChIP K562 ENCFF871DSA 302 bp overlap
MTA1 2 datasets
ChIP K-562 ENCSR807BGP.MTA1.K-562 221 bp overlap
ChIP K562 ENCFF230ZKA 425 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 171 bp overlap
MYC 2 datasets
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 155 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 75 bp overlap
MYF5 1 dataset
Motif DE_72h DE_72h-MYF5_MA1641.2 8 bp overlap
NBN 2 datasets
ChIP GM12878 ENCSR278SQL.NBN.GM12878 218 bp overlap
ChIP K-562 ENCSR085QEV.NBN.K-562 348 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 217 bp overlap
NFIA 1 dataset
Motif DE_72h DE_72h-NFIA_MA0670.2 6 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 202 bp overlap
ChIP K562 ENCFF167YID 451 bp overlap
NFIX 1 dataset
Motif DE_72h DE_72h-NFIX_MA0671.2 6 bp overlap
NHLH2 1 dataset
Motif DE_72h DE_72h-NHLH2_MA1529.2 16 bp overlap
NKRF 2 datasets
ChIP K562 ENCFF815TQL 401 bp overlap
ChIP K562 ENCFF815TQL 142 bp overlap
NKX2-3 1 dataset
Motif DE_72h DE_72h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_72h DE_72h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_72h DE_72h-NKX2-8_MA0673.2 8 bp overlap
NR2F2 1 dataset
ChIP K562 ENCFF004YPK 363 bp overlap
NR3C1 1 dataset
Motif DE_72h DE_72h-NR3C1_MA0113.4 15 bp overlap
NR3C2 1 dataset
Motif DE_72h DE_72h-NR3C2_MA0727.2 15 bp overlap
Neurod2 2 datasets
Motif DE_72h DE_72h-Neurod2_MA0668.3 8 bp overlap
Motif DE_72h DE_72h-Neurod2_MA1993.2 6 bp overlap
Olig2 1 dataset
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
PATZ1 1 dataset
ChIP SK-N-SH ENCFF650NCN 66 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 108 bp overlap
PGR 5 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 208 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 219 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 274 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 302 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 260 bp overlap
PHB2 2 datasets
ChIP K-562 ENCSR924GXX.PHB2.K-562 211 bp overlap
ChIP K562 ENCFF772SGA 334 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 478 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 162 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 258 bp overlap
PHOX2A 1 dataset
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 209 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 230 bp overlap
PLAGL2 1 dataset
Motif DE_72h DE_72h-PLAGL2_MA1548.2 8 bp overlap
POLR2A 7 datasets
ChIP GM12878 ENCFF412KAE 356 bp overlap
ChIP GM12891 ENCFF127ICP 394 bp overlap
ChIP GM12891 ENCFF379FCI 435 bp overlap
ChIP H1 ENCFF833NJP 302 bp overlap
ChIP K562 ENCFF215CWW 368 bp overlap
ChIP K562 ENCFF514URW 245 bp overlap
ChIP PFSK-1 ENCFF576NIT 471 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 319 bp overlap
ChIP K562 ENCFF740YLK 335 bp overlap
PROP1 1 dataset
Motif DE_72h DE_72h-PROP1_MA0715.1 11 bp overlap
Pgr 1 dataset
Motif DE_72h DE_72h-Pgr_MA2323.1 17 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1619.2 8 bp overlap
RAD21 2 datasets
ChIP GP5D GSE51234.RAD21.GP5D 322 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 80 bp overlap
RBFOX2 1 dataset
ChIP K562 ENCFF196WTG 88 bp overlap
SIN3A 1 dataset
ChIP K-562 ENCSR920BLG.SIN3A.K-562 154 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 459 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 105 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 460 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 318 bp overlap
ChIP K562 ENCFF506JCB 382 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 328 bp overlap
ChIP K562 ENCFF690CFF 425 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 267 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 310 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 286 bp overlap
SUPT5H 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 279 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 183 bp overlap
ChIP K562 ENCFF902PAW 346 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 234 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 165 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 149 bp overlap
TAL1 3 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 225 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 148 bp overlap
ChIP K562 ENCFF620GMX 385 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 315 bp overlap
ChIP K562 ENCFF931DJY 391 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 169 bp overlap
ChIP K562 ENCFF319QZT 381 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 360 bp overlap
THRAP3 1 dataset
ChIP K562 ENCFF445ZEJ 402 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 168 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR957LDM.TRIM24.K-562 228 bp overlap
ChIP K-562 ENCSR907MZR.TRIM24.K-562 207 bp overlap
TRIM25 2 datasets
ChIP K562 ENCFF376TLP 319 bp overlap
ChIP K562 ENCFF786UTW 319 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 181 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 181 bp overlap
YBX1 1 dataset
ChIP GM12878 ENCSR205SKQ.YBX1.GM12878 208 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 140 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 220 bp overlap
ZBTB5 3 datasets
ChIP K-562 ENCSR786OQY.ZBTB5.K-562 232 bp overlap
ChIP K562 ENCFF683TPZ 297 bp overlap
ChIP K562 ENCFF856PUG 320 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 382 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 365 bp overlap
ChIP K562 ENCFF795CMH 124 bp overlap
ChIP K562 ENCFF975RXS 404 bp overlap
ZKSCAN5 1 dataset
ChIP HepG2 ENCFF579HCQ 369 bp overlap
ZNF148 4 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 289 bp overlap
ChIP K-562 GSE121133.ZNF148.K-562 191 bp overlap
ChIP K562 ENCFF352SDL 402 bp overlap
ChIP K562 ENCFF352SDL 203 bp overlap
ZNF157 1 dataset
Motif DE_72h DE_72h-ZNF157_MA2331.1 21 bp overlap
ZNF214 1 dataset
Motif DE_72h DE_72h-ZNF214_MA1975.2 13 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 262 bp overlap
ChIP K562 ENCFF877JCX 401 bp overlap
ZNF280A 1 dataset
ChIP K562 ENCFF706EWX 298 bp overlap
ZNF281 4 datasets
ChIP HepG2 ENCFF585QNU 264 bp overlap
ChIP K-562 GSE121133.ZNF281.K-562 129 bp overlap
ChIP K562 ENCFF594VNM 286 bp overlap
ChIP WTC11 ENCFF551GAV 323 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 86 bp overlap
ZNF317 1 dataset
ChIP K562 ENCFF896LCF 215 bp overlap
ZNF354A 1 dataset
Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap
ZNF639 2 datasets
ChIP K-562 ENCSR949NVY.ZNF639.K-562 263 bp overlap
ChIP K562 ENCFF267NLX 359 bp overlap
ZNF692 1 dataset
Motif DE_72h DE_72h-ZNF692_MA1986.2 8 bp overlap
ZNF716 1 dataset
ChIP HEK293T GSE78099.ZNF716.HEK293T 184 bp overlap
ZNF740 1 dataset
ChIP K562 ENCFF505NFV 110 bp overlap