chr1:151,502,459–151,503,303

chr1 : 151,502,459 – 151,503,303

844 bp 99 TFs 11 linked genes

This 844 bp open chromatin element is linked to 11 target genes and is bound by 99 transcription factors.

Linked Genes

11 genes

Gene	Expression	Dist. to TSS	Distance	Link type
CGN		8.1 kb	Proximal	Proximity
POGZ		43.7 kb	Distal	Multiome
PSMB4		103.3 kb	Distal	Multiome
SNX27		109.3 kb	Distal	Multiome
SELENBP1		130.2 kb	Distal	Multiome
RFX5		155.6 kb	Distal	Multiome
PI4KB		175.2 kb	Distal	Multiome
ZNF687		220.6 kb	Distal	Multiome
PSMD4		248.1 kb	Distal	Multiome
MRPL9		260.6 kb	Distal	Multiome
TDRKH		287.6 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

99 transcription factors

ChIP K562 ENCFF492SKF 140 bp overlap

ChIP HeLa GSE40632.AFF4.HeLa 184 bp overlap

ChIP 22Rv1 GSE96652.AR.22Rv1 71 bp overlap

ChIP LNCaP GSE80256.AR.LNCaP 122 bp overlap

ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 163 bp overlap

ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 149 bp overlap

ARID1B 1 dataset

ChIP K-562 ENCSR822CCM.ARID1B.K-562 162 bp overlap

ChIP K-562 ENCSR972ZBV.ATF7.K-562 246 bp overlap

BCL11A 2 datasets

ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 88 bp overlap

ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 388 bp overlap

ChIP HEK293T GSE39579.BRD3.HEK293T 185 bp overlap

BRD4 2 datasets

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 250 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 261 bp overlap

CC2D1A 1 dataset

ChIP K-562 ENCSR343IFJ.CC2D1A.K-562 212 bp overlap

CEBPB 1 dataset

ChIP MV4-11 GSE88746.CEBPB.MV4-11 159 bp overlap

ChIP HaCaT GSE139685.CHD4.HaCaT 134 bp overlap

ChIP T-47D GSE62428.CHD8.T-47D 232 bp overlap

CTBP1 1 dataset

ChIP K-562 ENCSR201NQZ.CTBP1.K-562 264 bp overlap

ChIP KMS-11 ENCFF853JKX 597 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 116 bp overlap

ChIP ProEs GSE59087.EED.ProEs 132 bp overlap

ELF3 2 datasets

ChIP PDAC GSE64557.ELF3.PDAC 279 bp overlap

ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 331 bp overlap

ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 52 bp overlap

EP300 3 datasets

ChIP K562 ENCFF226VMS 201 bp overlap

ChIP neural ENCSR843ZUP.EP300.neural 259 bp overlap

ChIP neural cell ENCFF442QNK 158 bp overlap

ChIP Jurkat GSE49091.ERG.Jurkat 142 bp overlap

ChIP VCaP GSE49091.ERG.VCaP 127 bp overlap

ESR1 17 datasets

ChIP MCF-7 GSE76893.ESR1.MCF-7 157 bp overlap

ChIP MCF-7 GSE103023.ESR1.MCF-7 139 bp overlap

ChIP MCF-7 GSE48930.ESR1.MCF-7 137 bp overlap

ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 181 bp overlap

ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 175 bp overlap

ChIP MCF-7_E2-80min-ERalpha GSE94023.ESR1.MCF-7_E2-80min-ERalpha 189 bp overlap

ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 138 bp overlap

ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 218 bp overlap

ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 219 bp overlap

ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 159 bp overlap

ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 207 bp overlap

ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 118 bp overlap

ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 276 bp overlap

ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 180 bp overlap

ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 307 bp overlap

ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 155 bp overlap

ChIP T-47D ENCSR000BJS.ESR1.T-47D 127 bp overlap

ESR1_D538G 1 dataset

ChIP MCF-7_dox_E2 GSE94493.ESR1_D538G.MCF-7_dox_E2 196 bp overlap

ESR1_Y537N 3 datasets

ChIP MCF-7_E2_talen GSE94493.ESR1_Y537N.MCF-7_E2_talen 204 bp overlap

ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 237 bp overlap

ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 191 bp overlap

ESR1_Y537S 2 datasets

ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 299 bp overlap

ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 263 bp overlap

ESRRA 2 datasets

ChIP K-562 ENCSR486IFJ.ESRRA.K-562 218 bp overlap

ChIP K562 ENCFF968PEP 299 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 224 bp overlap

FOXA1 3 datasets

ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 311 bp overlap

ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 281 bp overlap

ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 277 bp overlap

FOXA2 4 datasets

ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 352 bp overlap

ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 245 bp overlap

ChIP DE DE-FOXA2-1 250 bp overlap

ChIP DE DE-FOXA2-1 501 bp overlap

FOXO1 1 dataset

ChIP CD34 GSE80773.FOXO1.CD34 312 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 253 bp overlap

GATA1 6 datasets

ChIP K-562 GSE107726.GATA1.K-562 211 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 146 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 100 bp overlap

ChIP erythroblast ENCFF867JAR 126 bp overlap

ChIP erythroblast ENCFF867JAR 335 bp overlap

ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 85 bp overlap

GATA2 8 datasets

ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 228 bp overlap

ChIP K-562 ENCSR000DKA.GATA2.K-562 272 bp overlap

ChIP K562 ENCFF830LLA 121 bp overlap

ChIP K562 ENCFF830LLA 330 bp overlap

ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 290 bp overlap

ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 140 bp overlap

ChIP TF1 GSE73207.GATA2.TF1 195 bp overlap

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 59 bp overlap

GATA3 6 datasets

ChIP MCF-7 ENCFF352QVM 346 bp overlap

ChIP MCF-7 ENCFF437NQS 355 bp overlap

ChIP MCF-7 GSE51274.GATA3.MCF-7 104 bp overlap

ChIP MCF-7 GSE51274.GATA3.MCF-7 273 bp overlap

ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 179 bp overlap

ChIP T47D-A1-2_EtOH GSE112491.GATA3.T47D-A1-2_EtOH 324 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 77 bp overlap

GATA4 7 datasets

ChIP DE DE-GATA4-1 844 bp overlap

ChIP DE DE-GATA4-2 844 bp overlap

ChIP foregut GSE117136.GATA4.foregut 216 bp overlap

ChIP foregut GSE117136.GATA4.foregut 354 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 844 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 128 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 448 bp overlap

GATA6 11 datasets

ChIP AGS GSE51936.GATA6.AGS 79 bp overlap

ChIP DE DE-GATA6-1 268 bp overlap

ChIP DE DE-GATA6-1 501 bp overlap

ChIP DE DE-GATA6-2 844 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 277 bp overlap

ChIP OACP4-C GSE132680.GATA6.OACP4-C 270 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 157 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 552 bp overlap

ChIP foregut GSE117136.GATA6.foregut 193 bp overlap

ChIP foregut GSE117136.GATA6.foregut 322 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 167 bp overlap

GFI1B 1 dataset

ChIP K-562 ENCSR509GDT.GFI1B.K-562 196 bp overlap

HDAC1 3 datasets

ChIP K-562 ENCSR387UWP.HDAC1.K-562 244 bp overlap

ChIP K-562 ENCSR711VWL.HDAC1.K-562 146 bp overlap

ChIP K562 ENCFF968WBH 183 bp overlap

HDAC2 6 datasets

ChIP K-562 ENCSR075HTM.HDAC2.K-562 186 bp overlap

ChIP K-562 ENCSR893WSB.HDAC2.K-562 180 bp overlap

ChIP K562 ENCFF744ALD 109 bp overlap

ChIP K562 ENCFF919OMP 271 bp overlap

ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 204 bp overlap

ChIP PC-3 GSE147455.HDAC2.PC-3 141 bp overlap

HMBOX1 2 datasets

ChIP K562 ENCFF055GAZ 58 bp overlap

ChIP K562 ENCFF317JJX 76 bp overlap

HNF1B 1 dataset

ChIP PDAC GSE64557.HNF1B.PDAC 401 bp overlap

HNF4A 1 dataset

ChIP KATO-III GSE114018.HNF4A.KATO-III 162 bp overlap

ChIP K-562 GSE103215.ILF3.K-562 240 bp overlap

INTS11 1 dataset

ChIP HeLa GSE125534.INTS11.HeLa 204 bp overlap

KDM1A 5 datasets

ChIP K-562 GSE117944.KDM1A.K-562 61 bp overlap

ChIP K-562 ENCSR360HRA.KDM1A.K-562 252 bp overlap

ChIP K-562 ENCSR908CMW.KDM1A.K-562 260 bp overlap

ChIP K562 ENCFF128TYE 148 bp overlap

ChIP K562 ENCFF133OLU 124 bp overlap

KMT2B-D 1 dataset

ChIP SW480 GSE115985.KMT2B-D.SW480 216 bp overlap

L3MBTL2 2 datasets

ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 125 bp overlap

ChIP K562 ENCFF320EQC 185 bp overlap

ChIP HEP GSE52637.LDB1.HEP 108 bp overlap

ChIP K-562 ENCSR818DQV.MAFG.K-562 72 bp overlap

ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 212 bp overlap

MEIS1 1 dataset

ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 113 bp overlap

ChIP K-562 ENCSR180NCY.MTA3.K-562 563 bp overlap

ChIP K562 ENCFF988ZRU 210 bp overlap

NCOA2 1 dataset

ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 138 bp overlap

NCOA3 1 dataset

ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 155 bp overlap

NELFE 2 datasets

ChIP HeLa GSE125534.NELFE.HeLa 352 bp overlap

ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 119 bp overlap

NFE2 2 datasets

ChIP K-562 ENCSR000FCC.NFE2.K-562 107 bp overlap

ChIP K562 ENCFF163BSI 169 bp overlap

NFKB1 1 dataset

ChIP L1236 GSE63736.NFKB1.L1236 152 bp overlap

NR2C2 3 datasets

ChIP K-562 ENCSR750LYM.NR2C2.K-562 298 bp overlap

ChIP K562 ENCFF750AXF 328 bp overlap

ChIP K562 ENCFF750AXF 531 bp overlap

NR2F1 5 datasets

ChIP GM12878 ENCFF273VKX 430 bp overlap

ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 276 bp overlap

ChIP K-562 ENCSR970NKQ.NR2F1.K-562 844 bp overlap

ChIP K562 ENCFF221HJH 271 bp overlap

ChIP K562 ENCFF221HJH 209 bp overlap

NR2F2 4 datasets

ChIP K-562 ENCSR000BRS.NR2F2.K-562 191 bp overlap

ChIP K562 ENCFF004YPK 267 bp overlap

ChIP MCF-7 ENCFF329FZB 311 bp overlap

ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 247 bp overlap

NR2F6 4 datasets

ChIP K-562 ENCSR707QWA.NR2F6.K-562 259 bp overlap

ChIP K-562 ENCSR707QWA.NR2F6.K-562 328 bp overlap

ChIP K562 ENCFF674RQA 127 bp overlap

ChIP K562 ENCFF674RQA 354 bp overlap

NR3C1 3 datasets

ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 246 bp overlap

ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 221 bp overlap

ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 236 bp overlap

NRIP1 2 datasets

ChIP MCF-7 ERP005838.NRIP1.MCF-7 181 bp overlap

ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 455 bp overlap

ChIP GM12878 ENCSR000BGR.PBX3.GM12878 92 bp overlap

ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 225 bp overlap

ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 218 bp overlap

PHIP 3 datasets

ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 145 bp overlap

ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 839 bp overlap

ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 86 bp overlap

PKNOX1 5 datasets

ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 294 bp overlap

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 290 bp overlap

ChIP K562 ENCFF236IUS 192 bp overlap

ChIP MCF-7 ENCFF116OCS 297 bp overlap

ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 312 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 299 bp overlap

RCOR1 2 datasets

ChIP K-562 ENCSR000EGC.RCOR1.K-562 153 bp overlap

ChIP K562 ENCFF216EEJ 187 bp overlap

RELA 9 datasets

ChIP 786-M1A GSE98012.RELA.786-M1A 334 bp overlap

ChIP 786-O GSE86092.RELA.786-O 412 bp overlap

ChIP 786-O GSE109953.RELA.786-O 337 bp overlap

ChIP HeLa-B2_TNFA GSE24518.RELA.HeLa-B2_TNFA 195 bp overlap

ChIP K-562 ENCSR772EEN.RELA.K-562 176 bp overlap

ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 147 bp overlap

ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 244 bp overlap

ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 178 bp overlap

ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 201 bp overlap

RUNX1 1 dataset

ChIP SKH1 GSE87283.RUNX1.SKH1 179 bp overlap

RUNX2 2 datasets

ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 464 bp overlap

ChIP PER-117 GSE151819.RUNX2.PER-117 202 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 580 bp overlap

SMAD3 2 datasets

ChIP HCC1954 GSE104760.SMAD3.HCC1954 244 bp overlap

ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 232 bp overlap

SMAD4 1 dataset

ChIP K562 ENCFF628RBP 330 bp overlap

SMARCA4 8 datasets

ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 93 bp overlap

ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 89 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 227 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 179 bp overlap

ChIP K-562 ENCSR587OQL.SMARCA4.K-562 88 bp overlap

ChIP K-562 ENCSR643VTW.SMARCA4.K-562 100 bp overlap

ChIP MCF-7 GSE123284.SMARCA4.MCF-7 760 bp overlap

ChIP MCF-7 GSE140185.SMARCA4.MCF-7 316 bp overlap

SMARCB1 2 datasets

ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 237 bp overlap

ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 321 bp overlap

SMARCE1 2 datasets

ChIP K-562 ENCSR157TCS.SMARCE1.K-562 214 bp overlap

ChIP K562 ENCFF690CFF 192 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 174 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 741 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 724 bp overlap

SOX6 2 datasets

ChIP K-562 ENCSR788RSW.SOX6.K-562 98 bp overlap

ChIP K562 ENCFF059YCJ 130 bp overlap

ChIP K-562 ENCSR000BGW.SPI1.K-562 100 bp overlap

STAT3 3 datasets

ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 194 bp overlap

ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 196 bp overlap

ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 218 bp overlap

SUPT5H 1 dataset

ChIP HeLa GSE125534.SUPT5H.HeLa 126 bp overlap

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 212 bp overlap

TEAD1 1 dataset

ChIP K562 ENCFF465AQA 94 bp overlap

TEAD4 1 dataset

ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 134 bp overlap

TFAP4 1 dataset

ChIP DLD-1 GSE46935.TFAP4.DLD-1 251 bp overlap

TRIM28 2 datasets

ChIP HEK293 ENCFF582MWI 173 bp overlap

ChIP HEK293 ENCFF582MWI 393 bp overlap

TRPS1 1 dataset

ChIP MCF-7 GSE133072.TRPS1.MCF-7 277 bp overlap

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 352 bp overlap

ZBTB1 1 dataset

ChIP K562 ENCFF038CML 481 bp overlap

ChIP HEK293T ENCFF402JZW 691 bp overlap

ChIP K-562 ENCSR920ASP.ZFX.K-562 263 bp overlap

ChIP K562 ENCFF169LZT 124 bp overlap

ChIP K562 ENCFF169LZT 349 bp overlap

ChIP K562 ENCFF536AJO 318 bp overlap

ZNF143 1 dataset

ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 139 bp overlap

ZNF283 1 dataset

ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap

ZNF407 1 dataset

ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 163 bp overlap

ZNF589 1 dataset

ChIP K562 ENCFF770FHN 168 bp overlap