chr6 : 33,954,437 33,954,809
372 bp 162 TFs 0 linked genes
This 372 bp open chromatin element has no linked target genes and is bound by 162 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:33,949,437 – 33,959,809
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
162 transcription factors
Source
Cell type
ARNT2 1 dataset
Motif DE_24h DE_24h-ARNT2_MA1464.2 8 bp overlap
Arnt 1 dataset
Motif DE_24h DE_24h-Arnt_MA0004.1 6 bp overlap
Arntl 1 dataset
Motif DE_24h DE_24h-Arntl_MA0603.2 8 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 228 bp overlap
ChIP Hep-G2 ENCSR000EDT.BHLHE40.Hep-G2 210 bp overlap
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 204 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 169 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 124 bp overlap
CLOCK 1 dataset
Motif DE_24h DE_24h-CLOCK_MA0819.3 7 bp overlap
CTCF 1 dataset
Motif DE_24h DE_24h-CTCF_MA0139.2 15 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 286 bp overlap
E2F6 5 datasets
ChIP H1 ENCFF785DWK 348 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 190 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 190 bp overlap
ChIP K562 ENCFF136LTS 296 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 188 bp overlap
E4F1 1 dataset
ChIP GM12878 ENCSR439WAF.E4F1.GM12878 209 bp overlap
EBF1 1 dataset
Motif DE_24h DE_24h-EBF1_MA0154.5 11 bp overlap
EHF 1 dataset
Motif DE_24h DE_24h-EHF_MA0598.4 9 bp overlap
ELF1 3 datasets
Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 176 bp overlap
ChIP K562 ENCFF496AKI 209 bp overlap
ELF2 1 dataset
Motif DE_24h DE_24h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_24h DE_24h-ELF4_MA0641.1 12 bp overlap
ELK1 1 dataset
Motif DE_24h DE_24h-ELK1_MA0028.3 9 bp overlap
ELK4 1 dataset
Motif DE_24h DE_24h-ELK4_MA0076.3 9 bp overlap
EOMES 2 datasets
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
ERF 1 dataset
Motif DE_24h DE_24h-ERF_MA0760.2 9 bp overlap
ERG 2 datasets
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 242 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 207 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 221 bp overlap
ETS1 2 datasets
Motif DE_24h DE_24h-ETS1_MA0098.4 9 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 243 bp overlap
ETS2 1 dataset
Motif DE_24h DE_24h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_24h DE_24h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_24h DE_24h-ETV2_MA0762.2 9 bp overlap
ETV3 1 dataset
Motif DE_24h DE_24h-ETV3_MA0763.2 9 bp overlap
ETV4 1 dataset
Motif DE_24h DE_24h-ETV4_MA0764.4 9 bp overlap
ETV6 1 dataset
Motif DE_24h DE_24h-ETV6_MA0645.2 9 bp overlap
ETV7 1 dataset
Motif DE_24h DE_24h-ETV7_MA1708.2 9 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Ebf4 1 dataset
Motif DE_24h DE_24h-Ebf4_MA2122.1 11 bp overlap
Elf5 1 dataset
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap
FEV 1 dataset
Motif DE_24h DE_24h-FEV_MA0156.4 9 bp overlap
FLI1 1 dataset
Motif DE_24h DE_24h-FLI1_MA0475.3 9 bp overlap
FOXH1 1 dataset
Motif DE_24h DE_24h-FOXH1_MA0479.2 8 bp overlap
GABPA 1 dataset
Motif DE_24h DE_24h-GABPA_MA0062.4 10 bp overlap
GABPB1 2 datasets
ChIP K-562 ENCSR138YYY.GABPB1.K-562 214 bp overlap
ChIP K562 ENCFF015GDS 364 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 372 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 372 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 372 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 372 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 255 bp overlap
HES1 1 dataset
Motif DE_24h DE_24h-HES1_MA1099.3 8 bp overlap
HES2 1 dataset
Motif DE_24h DE_24h-HES2_MA0616.3 9 bp overlap
HES5 1 dataset
Motif DE_24h DE_24h-HES5_MA0821.2 10 bp overlap
HES6 1 dataset
Motif DE_24h DE_24h-HES6_MA1493.1 10 bp overlap
HES7 1 dataset
Motif DE_24h DE_24h-HES7_MA0822.1 12 bp overlap
HEY1 1 dataset
Motif DE_24h DE_24h-HEY1_MA0823.1 10 bp overlap
HEY2 1 dataset
Motif DE_24h DE_24h-HEY2_MA0649.2 9 bp overlap
HIF1A 1 dataset
Motif DE_24h DE_24h-HIF1A_MA1106.2 6 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 245 bp overlap
IKZF1 1 dataset
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_24h DE_24h-Ikzf3_MA1992.2 9 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 372 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 316 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 372 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 349 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 372 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 197 bp overlap
JUND 1 dataset
Motif DE_24h DE_24h-JUND_MA0492.2 11 bp overlap
KLF5 1 dataset
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 255 bp overlap
MAX 8 datasets
Motif DE_24h DE_24h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF914VQY 312 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 108 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 149 bp overlap
ChIP K562 ENCFF110LJS 306 bp overlap
ChIP K562 ENCFF524IJO 190 bp overlap
ChIP NB4 ENCFF966MWB 277 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 149 bp overlap
MEIS1 2 datasets
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA1639.2 9 bp overlap
MEIS2 2 datasets
Motif DE_24h DE_24h-MEIS2_MA0774.1 8 bp overlap
Motif DE_24h DE_24h-MEIS2_MA1640.2 9 bp overlap
MEIS3 1 dataset
Motif DE_24h DE_24h-MEIS3_MA0775.2 7 bp overlap
MGA 1 dataset
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
MNT 4 datasets
Motif DE_24h DE_24h-MNT_MA0825.2 6 bp overlap
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 297 bp overlap
ChIP HepG2 ENCFF701PYP 312 bp overlap
ChIP K-562 ENCSR512NLO.MNT.K-562 245 bp overlap
MYC 4 datasets
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 105 bp overlap
Motif DE_24h DE_24h-MYC_MA0147.4 8 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 161 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 108 bp overlap
MYCN 2 datasets
ChIP BE2C GSE80151.MYCN.BE2C 179 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 149 bp overlap
Mlxip 1 dataset
Motif DE_24h DE_24h-Mlxip_MA0622.2 6 bp overlap
Nanog 1 dataset
Motif DE_24h DE_24h-Nanog_MA2339.1 7 bp overlap
Npas2 1 dataset
Motif DE_24h DE_24h-Npas2_MA0626.2 8 bp overlap
Nr2F6 1 dataset
Motif DE_24h DE_24h-Nr2F6_MA0728.1 15 bp overlap
PBX1 1 dataset
Motif DE_24h DE_24h-PBX1_MA0070.2 9 bp overlap
PBX2 1 dataset
Motif DE_24h DE_24h-PBX2_MA1113.3 9 bp overlap
PBX3 1 dataset
Motif DE_24h DE_24h-PBX3_MA1114.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 181 bp overlap
PGR 1 dataset
Motif DE_24h DE_24h-PGR_MA2327.1 9 bp overlap
PKNOX1 2 datasets
Motif DE_24h DE_24h-PKNOX1_MA0782.3 10 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 247 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 354 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 351 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 213 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 353 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 277 bp overlap
PRDM9 2 datasets
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Plagl1 1 dataset
Motif DE_24h DE_24h-Plagl1_MA1615.2 8 bp overlap
REST 1 dataset
Motif DE_24h DE_24h-REST_MA0138.3 20 bp overlap
RREB1 1 dataset
Motif DE_24h DE_24h-RREB1_MA0073.2 19 bp overlap
Rarb 1 dataset
Motif DE_24h DE_24h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap
SMAD2 2 datasets
ChIP hESC GSE29422.SMAD2.hESC 227 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 372 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 372 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 372 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 372 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 372 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 372 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 372 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 372 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 353 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 145 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 209 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 237 bp overlap
SMAD4 1 dataset
ChIP hESC GSE29422.SMAD4.hESC 154 bp overlap
SOHLH2 1 dataset
Motif DE_24h DE_24h-SOHLH2_MA1560.2 8 bp overlap
SP1 2 datasets
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
ChIP HEK293 GSE76494.SP1.HEK293 151 bp overlap
SP4 1 dataset
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 4 datasets
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SPDEF 1 dataset
Motif DE_24h DE_24h-SPDEF_MA0686.2 10 bp overlap
SPI1 8 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 189 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 174 bp overlap
ChIP GM12878 ENCFF134LCP 207 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 139 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 152 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 100 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 152 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 137 bp overlap
SPIB 1 dataset
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
SREBF1 1 dataset
Motif DE_24h DE_24h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_24h DE_24h-SREBF2_MA0596.1 10 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 169 bp overlap
Spi1 1 dataset
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 275 bp overlap
TBR1 1 dataset
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX18 1 dataset
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX19 1 dataset
Motif DE_24h DE_24h-TBX19_MA0804.2 17 bp overlap
TBX2 1 dataset
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
TBXT 1 dataset
Motif DE_24h DE_24h-TBXT_MA0009.2 16 bp overlap
TCF3 1 dataset
Motif DE_24h DE_24h-TCF3_MA0522.4 7 bp overlap
TFAP2A 1 dataset
Motif DE_24h DE_24h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 1 dataset
Motif DE_24h DE_24h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 1 dataset
Motif DE_24h DE_24h-TFAP2C_MA0815.1 13 bp overlap
TFEB 1 dataset
Motif DE_24h DE_24h-TFEB_MA0692.2 8 bp overlap
TFEC 1 dataset
Motif DE_24h DE_24h-TFEC_MA0871.3 8 bp overlap
TP53 1 dataset
Motif DE_24h DE_24h-TP53_MA0106.3 18 bp overlap
Wt1 1 dataset
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 134 bp overlap
YY2 1 dataset
ChIP HEK293 ENCSR692HSE.YY2.HEK293 232 bp overlap
ZBTB11 1 dataset
Motif DE_24h DE_24h-ZBTB11_MA2329.1 9 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 337 bp overlap
ZBTB7A 1 dataset
Motif DE_24h DE_24h-ZBTB7A_MA0750.3 9 bp overlap
ZKSCAN5 2 datasets
Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF148 1 dataset
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF157 1 dataset
Motif DE_24h DE_24h-ZNF157_MA2331.1 21 bp overlap
ZNF175 1 dataset
Motif DE_24h DE_24h-ZNF175_MA2332.1 9 bp overlap
ZNF257 2 datasets
Motif DE_24h DE_24h-ZNF257_MA1710.2 10 bp overlap
Motif DE_24h DE_24h-ZNF257_MA1710.2 10 bp overlap
ZNF263 2 datasets
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 327 bp overlap
ZNF281 2 datasets
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ZNF320 1 dataset
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 191 bp overlap
ZNF528 2 datasets
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
Motif DE_24h DE_24h-ZNF530_MA1981.2 14 bp overlap
ZNF549 1 dataset
Motif DE_24h DE_24h-ZNF549_MA1728.2 8 bp overlap
ZNF675 1 dataset
Motif DE_24h DE_24h-ZNF675_MA1714.2 19 bp overlap
ZNF701 1 dataset
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
ZNF707 1 dataset
Motif DE_24h DE_24h-ZNF707_MA1715.1 15 bp overlap
ZNF816 1 dataset
Motif DE_24h DE_24h-ZNF816_MA1719.2 15 bp overlap
Zbtb2 1 dataset
Motif DE_24h DE_24h-Zbtb2_MA2340.1 10 bp overlap
Zfp335 1 dataset
Motif DE_24h DE_24h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap