chr2 : 188,456,073 – 188,456,482
409 bp 119 TFs 0 linked genes
This 409 bp open chromatin element has no linked target genes and is bound by 119 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:188,451,073 – 188,461,482
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
119 transcription factors
Source
Cell type
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 107 bp overlap
ARNT2 2 datasets
Motif DE_12h DE_12h-ARNT2_MA1464.2 8 bp overlap
Motif ES_0h ES_0h-ARNT2_MA1464.2 8 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 287 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 191 bp overlap
ATF3 2 datasets
ChIP H1 ENCFF852GZY 241 bp overlap
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 116 bp overlap
Arnt 2 datasets
Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap
Motif ES_0h ES_0h-Arnt_MA0004.1 6 bp overlap
Arntl 2 datasets
Motif DE_12h DE_12h-Arntl_MA0603.2 8 bp overlap
Motif ES_0h ES_0h-Arntl_MA0603.2 8 bp overlap
BCL6B 1 dataset
Motif ES_0h ES_0h-BCL6B_MA0731.1 17 bp overlap
BHLHE40 3 datasets
Motif DE_12h DE_12h-BHLHE40_MA0464.3 8 bp overlap
Motif ES_0h ES_0h-BHLHE40_MA0464.3 8 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 202 bp overlap
BHLHE41 2 datasets
Motif DE_12h DE_12h-BHLHE41_MA0636.1 10 bp overlap
Motif ES_0h ES_0h-BHLHE41_MA0636.1 10 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 117 bp overlap
CBX3 1 dataset
ChIP HCT116 ENCFF947BOL 239 bp overlap
CDX1 1 dataset
Motif ES_0h ES_0h-CDX1_MA0878.3 10 bp overlap
CEBPB 1 dataset
ChIP H1 ENCFF871PTR 261 bp overlap
CEBPD 2 datasets
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CTCF 10 datasets
ChIP 22Rv1 ENCFF466OXN 146 bp overlap
ChIP C4-2B ENCFF821XVN 201 bp overlap
ChIP DOHH2 ENCFF637WNW 66 bp overlap
ChIP GM23338 ENCFF832KWE 53 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 156 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 80 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 65 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 51 bp overlap
ChIP VCaP ENCFF858YQT 87 bp overlap
ChIP WTC11 ENCFF658QVH 86 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 128 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 161 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 371 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 265 bp overlap
ERF::NHLH1 3 datasets
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
Motif ES_0h ES_0h-ERFNHLH1_MA1938.2 16 bp overlap
Motif ES_0h ES_0h-ERFNHLH1_MA1938.2 16 bp overlap
EWSR1-FLI1 1 dataset
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
Ebf4 1 dataset
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FOXD2 2 datasets
Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap
Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap
GFI1 1 dataset
Motif ES_0h ES_0h-GFI1_MA0038.3 11 bp overlap
HES1 2 datasets
Motif DE_12h DE_12h-HES1_MA1099.3 8 bp overlap
Motif ES_0h ES_0h-HES1_MA1099.3 8 bp overlap
HES2 2 datasets
Motif DE_12h DE_12h-HES2_MA0616.3 9 bp overlap
Motif ES_0h ES_0h-HES2_MA0616.3 9 bp overlap
HES6 2 datasets
Motif DE_12h DE_12h-HES6_MA1493.1 10 bp overlap
Motif ES_0h ES_0h-HES6_MA1493.1 10 bp overlap
HES7 2 datasets
Motif DE_12h DE_12h-HES7_MA0822.1 12 bp overlap
Motif ES_0h ES_0h-HES7_MA0822.1 12 bp overlap
HIC2 1 dataset
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HIF1A 2 datasets
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
Motif ES_0h ES_0h-HIF1A_MA1106.2 6 bp overlap
HLF 2 datasets
Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap
Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap
HNF4A 1 dataset
Motif ES_0h ES_0h-HNF4A_MA1494.2 14 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
MAX 6 datasets
Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap
Motif ES_0h ES_0h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF601FOM 325 bp overlap
ChIP H1 ENCFF914VQY 252 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 240 bp overlap
ChIP WTC11 ENCFF223QFY 409 bp overlap
MAX::MYC 2 datasets
Motif DE_12h DE_12h-MAXMYC_MA0059.2 10 bp overlap
Motif ES_0h ES_0h-MAXMYC_MA0059.2 10 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MITF 2 datasets
Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap
Motif ES_0h ES_0h-MITF_MA0620.4 10 bp overlap
MLX 2 datasets
Motif DE_12h DE_12h-MLX_MA0663.1 10 bp overlap
Motif ES_0h ES_0h-MLX_MA0663.1 10 bp overlap
MLXIPL 2 datasets
Motif DE_12h DE_12h-MLXIPL_MA0664.2 8 bp overlap
Motif ES_0h ES_0h-MLXIPL_MA0664.2 8 bp overlap
MNT 2 datasets
Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap
Motif ES_0h ES_0h-MNT_MA0825.2 6 bp overlap
MTF1 1 dataset
Motif ES_0h ES_0h-MTF1_MA0863.1 14 bp overlap
Mecom 1 dataset
Motif ES_0h ES_0h-Mecom_MA0029.2 11 bp overlap
Mlxip 2 datasets
Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap
Motif ES_0h ES_0h-Mlxip_MA0622.2 6 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 399 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 229 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 369 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 188 bp overlap
NFIL3 2 datasets
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
NR2F1 1 dataset
Motif ES_0h ES_0h-NR2F1_MA1538.1 15 bp overlap
NR2F6 1 dataset
Motif ES_0h ES_0h-NR2F6_MA1539.1 15 bp overlap
Nfat5 1 dataset
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 371 bp overlap
ChIP H1 ENCFF833NJP 290 bp overlap
POU1F1 1 dataset
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 2 datasets
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 2 datasets
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 2 datasets
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 2 datasets
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 3 datasets
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 3 datasets
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 3 datasets
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU4F1 1 dataset
Motif ES_0h ES_0h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif ES_0h ES_0h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif ES_0h ES_0h-POU4F3_MA0791.2 12 bp overlap
POU5F1 13 datasets
ChIP BG03 GSE21614.POU5F1.BG03 200 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 348 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 409 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 154 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 196 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 155 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 366 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 409 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 287 bp overlap
POU5F1B 2 datasets
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 231 bp overlap
Pou5f1::Sox2 2 datasets
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 1 dataset
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 77 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 183 bp overlap
REL 1 dataset
Motif ES_0h ES_0h-REL_MA0101.1 10 bp overlap
Rfx6 1 dataset
Motif ES_0h ES_0h-Rfx6_MA1724.2 9 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 133 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_EV-TGF GSE138496.SMAD2-3.HGrC1_EV-TGF 126 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 150 bp overlap
SOHLH2 2 datasets
Motif DE_12h DE_12h-SOHLH2_MA1560.2 8 bp overlap
Motif ES_0h ES_0h-SOHLH2_MA1560.2 8 bp overlap
SOX13 1 dataset
Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap
SOX2 2 datasets
Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 344 bp overlap
SP1 2 datasets
ChIP WTC11 ENCFF688PEU 409 bp overlap
ChIP WTC11 ENCFF688PEU 138 bp overlap
SREBF2 2 datasets
Motif DE_12h DE_12h-SREBF2_MA0828.3 10 bp overlap
Motif ES_0h ES_0h-SREBF2_MA0828.3 10 bp overlap
Sox17 1 dataset
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap
TCF3 2 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TCFL5 2 datasets
Motif DE_12h DE_12h-TCFL5_MA0632.3 8 bp overlap
Motif ES_0h ES_0h-TCFL5_MA0632.3 8 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 3 datasets
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 366 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 274 bp overlap
TFE3 2 datasets
Motif DE_12h DE_12h-TFE3_MA0831.3 10 bp overlap
Motif ES_0h ES_0h-TFE3_MA0831.3 10 bp overlap
TFEB 2 datasets
Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap
Motif ES_0h ES_0h-TFEB_MA0692.2 8 bp overlap
TFEC 2 datasets
Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap
Motif ES_0h ES_0h-TFEC_MA0871.3 8 bp overlap
THAP1 1 dataset
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 197 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 155 bp overlap
USF1 5 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif ES_0h ES_0h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 214 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 262 bp overlap
ChIP WTC11 ENCFF699QGS 139 bp overlap
USF2 5 datasets
Motif DE_12h DE_12h-USF2_MA0526.5 10 bp overlap
Motif ES_0h ES_0h-USF2_MA0526.5 10 bp overlap
ChIP H1 ENCFF434EDF 277 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 205 bp overlap
ChIP WTC11 ENCFF139JAW 258 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 203 bp overlap
YY2 1 dataset
Motif ES_0h ES_0h-YY2_MA0748.3 7 bp overlap
Yy1 1 dataset
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZBED4 1 dataset
Motif ES_0h ES_0h-ZBED4_MA2328.1 10 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 307 bp overlap
ZBTB7A 1 dataset
Motif ES_0h ES_0h-ZBTB7A_MA0750.3 9 bp overlap
ZFP14 2 datasets
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZFP42 1 dataset
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 153 bp overlap
ZNF136 1 dataset
Motif ES_0h ES_0h-ZNF136_MA1588.1 15 bp overlap
ZNF341 2 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
Motif ES_0h ES_0h-ZNF341_MA1655.2 8 bp overlap
ZNF416 1 dataset
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 210 bp overlap
ZNF558 1 dataset
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
ZNF610 1 dataset
Motif ES_0h ES_0h-ZNF610_MA1713.2 10 bp overlap
ZNF675 1 dataset
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
ZNF680 1 dataset
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
ZNF682 1 dataset
Motif ES_0h ES_0h-ZNF682_MA1599.2 11 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
ZNF85 1 dataset
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 224 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
Zfx 2 datasets
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
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