chr2 : 176,105,471 176,106,081
610 bp 116 TFs 2 linked genes
This 610 bp open chromatin element is linked to HOXD11 and HOXD12 and is bound by 116 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
HOXD11 1.2 kb Proximal Proximity
HOXD12 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:176,100,471 – 176,111,081
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
116 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 232 bp overlap
ASXL1 1 dataset
ChIP HEK293T GSE51673.ASXL1.HEK293T 134 bp overlap
BCL11A 1 dataset
ChIP HEK293 ENCFF294OHB 97 bp overlap
BCL11B 1 dataset
ChIP HEK293 ENCFF859UHP 62 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 211 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 511 bp overlap
ChIP NCI-H23 GSE104481.BRD2.NCI-H23 392 bp overlap
BRD4 6 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 214 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 288 bp overlap
ChIP HEK293T GSE51633.BRD4.HEK293T 182 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 79 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 153 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 392 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 73 bp overlap
CDK9 1 dataset
ChIP HEK293T_SICTR GSE51633.CDK9.HEK293T_SICTR 97 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 520 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 336 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 389 bp overlap
ChIP H1 ENCFF329MAX 591 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 463 bp overlap
CTCF 3 datasets
ChIP HEK293 ENCFF821TIC 161 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 179 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 169 bp overlap
EGR2 2 datasets
ChIP HEK293 ENCFF336LFH 67 bp overlap
ChIP HEK293 ENCFF336LFH 267 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 68 bp overlap
ESR1 1 dataset
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 304 bp overlap
EZH2 12 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 447 bp overlap
ChIP GM23338 ENCFF613YON 610 bp overlap
ChIP GM23338 ENCFF886DXX 296 bp overlap
ChIP H1 ENCFF232NZA 610 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 365 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 189 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 101 bp overlap
ChIP fibroblast of lung ENCFF479BAW 85 bp overlap
ChIP keratinocyte ENCFF070STK 328 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 176 bp overlap
ChIP neural progenitor cell ENCFF018MKA 610 bp overlap
ChIP neural progenitor cell ENCFF472NFV 610 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 97 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 113 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 310 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 610 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 119 bp overlap
ChIP HEK293 ENCFF446EIF 128 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 439 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 265 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 291 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 303 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 230 bp overlap
INO80 1 dataset
ChIP Hep-G2 GSE97411.INO80.Hep-G2 241 bp overlap
JUN 2 datasets
ChIP DE_D2 S54-DE-d2-JUN-exp2 302 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 461 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 155 bp overlap
KDM4C 1 dataset
ChIP SW1783 GSE92483.KDM4C.SW1783 251 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 210 bp overlap
KLF16 3 datasets
ChIP HEK293 ENCFF558HSJ 79 bp overlap
ChIP HEK293 ENCFF558HSJ 286 bp overlap
ChIP HEK293 ENCSR397DQC.KLF16.HEK293 317 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 58 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 368 bp overlap
KLF5 2 datasets
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 183 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 85 bp overlap
KLF7 2 datasets
ChIP HEK293 ENCFF599UKL 74 bp overlap
ChIP HEK293 ENCSR604VWJ.KLF7.HEK293 58 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCFF929IAJ 62 bp overlap
KLF9 4 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 72 bp overlap
ChIP HEK293 ENCFF588INF 67 bp overlap
ChIP HEK293 ENCFF588INF 275 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 234 bp overlap
KMT2A 7 datasets
ChIP HEK293T_C-term GSE90762.KMT2A.HEK293T_C-term 273 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 301 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 301 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 421 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 450 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 294 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 484 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 223 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 179 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 214 bp overlap
MYC 2 datasets
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 159 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 119 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 246 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 232 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 156 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCFF875BDB 62 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 196 bp overlap
ChIP HEK293 ENCFF016MNJ 174 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 280 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 187 bp overlap
POLR2A 11 datasets
ChIP H54 ENCFF398BXN 217 bp overlap
ChIP SK-N-MC ENCFF088IVG 211 bp overlap
ChIP sigmoid colon ENCFF101ILL 242 bp overlap
ChIP sigmoid colon ENCFF543ARF 159 bp overlap
ChIP sigmoid colon ENCFF653CQA 77 bp overlap
ChIP sigmoid colon ENCFF661AMI 74 bp overlap
ChIP sigmoid colon ENCFF725QFT 235 bp overlap
ChIP sigmoid colon ENCFF748YVT 198 bp overlap
ChIP uterus ENCFF208ADI 196 bp overlap
ChIP vagina ENCFF216BYP 115 bp overlap
ChIP vagina ENCFF384GAB 461 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 610 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 202 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 411 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 610 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 162 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 265 bp overlap
RBM39 2 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 238 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 238 bp overlap
REST 1 dataset
ChIP HEK293 ENCSR896UBV.REST.HEK293 276 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 610 bp overlap
ChIP NCCIT GSE71675.RNF2.NCCIT 514 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 147 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 243 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 120 bp overlap
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 451 bp overlap
SMARCA4 1 dataset
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 610 bp overlap
SMARCC1 4 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 346 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 531 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 340 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 237 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 256 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 279 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 163 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 610 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 168 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 208 bp overlap
SPI1 4 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 70 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 91 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 54 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 57 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 298 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 508 bp overlap
SUPT5H 1 dataset
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 179 bp overlap
SUZ12 6 datasets
ChIP H1 ENCFF881NFR 610 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 387 bp overlap
ChIP NT2/D1 ENCFF574SXS 514 bp overlap
ChIP NT2/D1 ENCFF574SXS 605 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 159 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 129 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 216 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 185 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 256 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 341 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 349 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 175 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 485 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 67 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 245 bp overlap
ZBTB12 1 dataset
ChIP HEK293 ENCFF963HPT 155 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 546 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 610 bp overlap
ZBTB21 1 dataset
ChIP HEK293 ENCFF509WYZ 75 bp overlap
ZBTB48 4 datasets
ChIP HEK293 ENCFF809BPK 170 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 215 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 216 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 304 bp overlap
ZBTB6 3 datasets
ChIP HEK293 ENCFF881ECZ 331 bp overlap
ChIP HEK293 ENCSR619OUC.ZBTB6.HEK293 422 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 205 bp overlap
ZBTB7A 2 datasets
ChIP HEK293 ENCSR773REP.ZBTB7A.HEK293 271 bp overlap
ChIP HEK293 ENCSR773REP.ZBTB7A.HEK293 69 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 207 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 74 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 266 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 610 bp overlap
ZFP69B 3 datasets
ChIP HEK293 ENCFF942LFP 116 bp overlap
ChIP HEK293 ENCFF942LFP 318 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 165 bp overlap
ZFX 1 dataset
ChIP HEK293T ENCFF402JZW 517 bp overlap
ZNF202 1 dataset
ChIP HEK293T GSE78099.ZNF202.HEK293T 178 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 191 bp overlap
ZNF257 2 datasets
ChIP HEK293T GSE78099.ZNF257.HEK293T 50 bp overlap
ChIP HEK293T GSE78099.ZNF257.HEK293T 151 bp overlap
ZNF263 1 dataset
ChIP HEK293T GSE78099.ZNF263.HEK293T 115 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 421 bp overlap
ZNF28 1 dataset
ChIP HEK293T GSE78099.ZNF28.HEK293T 281 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 184 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCFF944VMC 243 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 154 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 55 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCFF184XEW 200 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 59 bp overlap
ZNF501 2 datasets
ChIP HEK293 ENCFF066RAQ 348 bp overlap
ChIP HEK293 ENCSR461ZJT.ZNF501.HEK293 286 bp overlap
ZNF513 2 datasets
ChIP HEK293 ENCFF457TCC 100 bp overlap
ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 151 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 153 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 261 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 189 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCFF040AZE 132 bp overlap
ZNF76 4 datasets
ChIP HEK293 ENCFF374TCG 224 bp overlap
ChIP HEK293 ENCFF374TCG 451 bp overlap
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 351 bp overlap
ChIP HEK293 GSE76494.ZNF76.HEK293 156 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 112 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 100 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 332 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 208 bp overlap