chr2 : 172,080,964 172,081,603
639 bp 101 TFs 4 linked genes
This 639 bp open chromatin element is linked to 4 target genes and is bound by 101 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
DLX1 3.9 kb Proximal Proximity
METAP1D 81.3 kb Distal Multiome
HAT1 158.8 kb Distal Multiome
SLC25A12 187.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:172,075,964 – 172,086,603
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
101 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 509 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 490 bp overlap
AGO2 3 datasets
ChIP HepG2 ENCFF252VFI 184 bp overlap
ChIP HepG2 ENCFF773YDL 374 bp overlap
ChIP HepG2 ENCFF773YDL 184 bp overlap
AR 3 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 240 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 177 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 133 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 361 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 518 bp overlap
ChIP H1 ENCFF399KAM 310 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 451 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 271 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 631 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 639 bp overlap
BHLHA15 1 dataset
ChIP HepG2 ENCFF569DAY 456 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 91 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 366 bp overlap
BRD4 3 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 276 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 290 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 539 bp overlap
CCDC6 1 dataset
ChIP HepG2 ENCFF751JSA 198 bp overlap
CREB1 2 datasets
ChIP HepG2 ENCFF245CBB 397 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 137 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 364 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 197 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 119 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 167 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 319 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 398 bp overlap
EGR1 2 datasets
ChIP A2780_cisplatin GSE129700.EGR1.A2780_cisplatin 339 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 374 bp overlap
ESR1 3 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 330 bp overlap
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 60 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 207 bp overlap
EZH2 22 datasets
ChIP B cell ENCFF803EMO 425 bp overlap
ChIP B cell ENCFF803EMO 225 bp overlap
ChIP GM23338 ENCFF613YON 639 bp overlap
ChIP GM23338 ENCFF886DXX 203 bp overlap
ChIP H1 ENCFF232NZA 639 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 639 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 639 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 289 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 72 bp overlap
ChIP astrocyte ENCFF365JTP 570 bp overlap
ChIP astrocyte ENCFF365JTP 570 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 639 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 554 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 347 bp overlap
ChIP fibroblast of lung ENCFF479BAW 255 bp overlap
ChIP fibroblast of lung ENCFF479BAW 52 bp overlap
ChIP hepatocyte ENCFF118DKH 205 bp overlap
ChIP hepatocyte ENCFF552DZB 639 bp overlap
ChIP keratinocyte ENCFF070STK 347 bp overlap
ChIP neural progenitor cell ENCFF018MKA 639 bp overlap
ChIP neural progenitor cell ENCFF472NFV 639 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 253 bp overlap
FOSL2 1 dataset
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 116 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 333 bp overlap
GABPA 2 datasets
ChIP WA01 ENCSR000BIW.GABPA.WA01 186 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 107 bp overlap
GATA2 1 dataset
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 117 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 265 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 492 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 60 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 400 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 639 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 348 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 115 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 270 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 559 bp overlap
HIVEP1 2 datasets
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 203 bp overlap
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 214 bp overlap
HNF4A 4 datasets
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 333 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 188 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 214 bp overlap
ChIP HepG2 ENCFF146SSF 215 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 335 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 341 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 337 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 430 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 405 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 639 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 639 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 314 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 330 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 285 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 277 bp overlap
KMT2A 3 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 352 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 170 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 225 bp overlap
LCOR 2 datasets
ChIP HepG2 ENCFF499KCU 84 bp overlap
ChIP HepG2 ENCFF499KCU 340 bp overlap
MAX 5 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 449 bp overlap
ChIP HepG2 ENCFF479OHI 485 bp overlap
ChIP HepG2 ENCFF479OHI 274 bp overlap
ChIP HepG2 ENCFF507HCX 429 bp overlap
ChIP HepG2 ENCFF507HCX 617 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 282 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 529 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 249 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 348 bp overlap
ONECUT1 2 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 145 bp overlap
ChIP HepG2 ENCFF243FIR 219 bp overlap
PATZ1 1 dataset
ChIP HepG2 ENCFF723PFC 353 bp overlap
PAX5 1 dataset
ChIP GM12891 ENCSR000BJH.PAX5.GM12891 127 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 175 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 356 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 418 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 268 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 552 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 361 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 350 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 274 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 306 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 274 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 219 bp overlap
RBM39 2 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 346 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 394 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 206 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 168 bp overlap
ChIP neural cell ENCFF882LXX 215 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 639 bp overlap
ChIP H1 ENCFF239FFS 639 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 359 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 294 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 276 bp overlap
SKI 1 dataset
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 50 bp overlap
SMAD2-3 5 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 120 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 63 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 172 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 300 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 438 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 58 bp overlap
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 288 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 360 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 199 bp overlap
SOX13 1 dataset
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 132 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 194 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 132 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 263 bp overlap
SREBP2 2 datasets
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 142 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 103 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 344 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 52 bp overlap
SUZ12 8 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 639 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 639 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 170 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 639 bp overlap
ChIP NT2/D1 ENCFF574SXS 421 bp overlap
ChIP NT2/D1 ENCFF574SXS 171 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 639 bp overlap
TAF15 4 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 249 bp overlap
ChIP HepG2 ENCFF116QSW 475 bp overlap
ChIP HepG2 ENCFF116QSW 275 bp overlap
ChIP HepG2 ENCFF406BOT 475 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 292 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 201 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 329 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 130 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 72 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 517 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 639 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 235 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 504 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 261 bp overlap
ZBTB33 4 datasets
ChIP HepG2 ENCFF778UKV 117 bp overlap
ChIP K562 ENCFF427SDV 278 bp overlap
ChIP K562 ENCFF875HLX 264 bp overlap
ChIP K562 ENCFF875HLX 246 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 147 bp overlap
ZFP91 2 datasets
ChIP HepG2 ENCFF012CME 218 bp overlap
ChIP HepG2 ENCFF012CME 418 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 157 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 216 bp overlap
ZNF407 2 datasets
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 139 bp overlap
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 144 bp overlap
ZNF572 1 dataset
ChIP HepG2 ENCFF507EFS 134 bp overlap
ZNF605 3 datasets
ChIP HepG2 ENCFF640NFJ 295 bp overlap
ChIP HepG2 ENCFF640NFJ 422 bp overlap
ChIP HepG2 ENCFF640NFJ 178 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 386 bp overlap
ChIP HepG2 ENCFF653WIX 421 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 589 bp overlap