chr20 : 35,741,040 35,741,226
186 bp 91 TFs 2 linked genes
This 186 bp open chromatin element is linked to RBM39 and ENSG00000289872 and is bound by 91 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RBM39 1.0 kb Proximal Proximity
ENSG00000289872 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:35,736,040 – 35,746,226
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP HepG2 ENCFF122GLS 130 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 186 bp overlap
ATF4 1 dataset
ChIP HepG2 ENCFF903ADR 71 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 65 bp overlap
BRD4 1 dataset
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 97 bp overlap
CHD1 5 datasets
ChIP H1 ENCFF998XEK 186 bp overlap
ChIP LNCaP_DHT GSE64528.CHD1.LNCaP_DHT 56 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 122 bp overlap
ChIP hMSC-TERT_adipocyte GSE89179.CHD1.hMSC-TERT_adipocyte 179 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 186 bp overlap
CHD4 2 datasets
ChIP HepG2 ENCFF615GUT 186 bp overlap
ChIP HepG2 ENCFF615GUT 66 bp overlap
CREB1 1 dataset
ChIP HepG2 ENCFF245CBB 186 bp overlap
CTCF 4 datasets
ChIP PC-9 ENCFF539ULB 98 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 97 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 77 bp overlap
ChIP thyroid gland ENCFF631QRY 115 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 186 bp overlap
DNMT1 1 dataset
ChIP HepG2 ENCFF153HEB 186 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 186 bp overlap
EEA1 1 dataset
ChIP HepG2 ENCFF958VUU 186 bp overlap
ERF 1 dataset
ChIP HepG2 ENCFF647PIT 186 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 87 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 57 bp overlap
GABPA 2 datasets
ChIP HL-60 ENCFF515BEZ 96 bp overlap
ChIP HL-60 ENCFF515BEZ 183 bp overlap
GLYR1 1 dataset
ChIP HepG2 ENCFF114PDZ 150 bp overlap
HDAC1 5 datasets
ChIP HepG2 ENCFF304IEJ 186 bp overlap
ChIP HepG2 ENCFF750ZWM 125 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 130 bp overlap
ChIP K562 ENCFF928TKZ 176 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 153 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 186 bp overlap
HMGXB4 1 dataset
ChIP K562 ENCFF620JLK 118 bp overlap
HNRNPL 3 datasets
ChIP HepG2 ENCFF671UYF 186 bp overlap
ChIP K-562 GSE120104.HNRNPL.K-562 72 bp overlap
ChIP K-562 ENCSR594BNR.HNRNPL.K-562 72 bp overlap
HOMEZ 1 dataset
ChIP HepG2 ENCFF800ZQH 186 bp overlap
IKZF5 2 datasets
ChIP HepG2 ENCFF641EBK 97 bp overlap
ChIP HepG2 ENCFF641EBK 173 bp overlap
ISL2 1 dataset
ChIP HepG2 ENCFF742RIP 186 bp overlap
JRK 2 datasets
ChIP HepG2 ENCFF350YLO 81 bp overlap
ChIP HepG2 ENCFF350YLO 186 bp overlap
JUN 2 datasets
ChIP A549 ENCFF191QZG 186 bp overlap
ChIP A549 ENCFF191QZG 186 bp overlap
JUNB 1 dataset
ChIP HepG2 ENCFF133OUQ 70 bp overlap
KAT7 1 dataset
ChIP HepG2 ENCFF613PTN 167 bp overlap
KDM1A 3 datasets
ChIP HepG2 ENCFF240UWG 90 bp overlap
ChIP HepG2 ENCFF240UWG 186 bp overlap
ChIP HepG2 ENCFF240UWG 180 bp overlap
KMT2A 3 datasets
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 112 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 74 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 186 bp overlap
KMT2B 1 dataset
ChIP HepG2 ENCFF675TEK 186 bp overlap
LARP7 1 dataset
ChIP GM12878 ENCFF513CEX 186 bp overlap
MAX 2 datasets
ChIP Ishikawa ENCFF064TDQ 80 bp overlap
ChIP K562 ENCFF524IJO 186 bp overlap
MED13 2 datasets
ChIP HepG2 ENCFF143ZBX 186 bp overlap
ChIP HepG2 ENCFF143ZBX 118 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 186 bp overlap
ChIP K562 ENCFF074XRJ 137 bp overlap
NBN 1 dataset
ChIP HepG2 ENCFF781RIL 73 bp overlap
NCOA1 1 dataset
ChIP K562 ENCFF962VHQ 186 bp overlap
NELFA 2 datasets
ChIP HeLa_40min-Flavo-PJ34-10min-H2O2 GSE93931.NELFA.HeLa_40min-Flavo-PJ34-10min-H2O2 83 bp overlap
ChIP HeLa_Flavo-PJ34-10min-H2O2 GSE100742.NELFA.HeLa_Flavo-PJ34-10min-H2O2 83 bp overlap
NR1H2 1 dataset
ChIP K562 ENCFF386VZB 172 bp overlap
NR2F6 1 dataset
ChIP HepG2 ENCFF514UJI 186 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 161 bp overlap
PHB 1 dataset
ChIP K562 ENCFF225VHG 68 bp overlap
POLR2A 4 datasets
ChIP HepG2 ENCFF252NAR 124 bp overlap
ChIP adrenal gland ENCFF843OBJ 184 bp overlap
ChIP body of pancreas ENCFF501FEC 186 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 186 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 85 bp overlap
ChIP HepG2 ENCFF508UTS 186 bp overlap
PRDM15 1 dataset
ChIP HepG2 ENCFF259LUZ 116 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 186 bp overlap
ChIP HepG2 ENCFF939HTZ 102 bp overlap
ChIP K562 ENCFF196WTG 186 bp overlap
ChIP K562 ENCFF967GRF 186 bp overlap
SIX4 1 dataset
ChIP HepG2 ENCFF372NPG 186 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCFF171OVM 52 bp overlap
SMAD9 1 dataset
ChIP HepG2 ENCFF185UOW 76 bp overlap
SNAPC5 1 dataset
ChIP HepG2 ENCFF853IKB 186 bp overlap
SREBP2 1 dataset
ChIP monocyte GSE129202.SREBP2.monocyte 126 bp overlap
STAT6 1 dataset
ChIP HepG2 ENCFF370LZV 186 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 186 bp overlap
TAF1 1 dataset
ChIP HeLa-S3 ENCFF556LCN 186 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCFF866POT 99 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 141 bp overlap
TEAD4 1 dataset
ChIP BJ_fibroblast GSE114367.TEAD4.BJ_fibroblast 118 bp overlap
TFCP2L1 1 dataset
ChIP A549 ENCFF393VBT 50 bp overlap
TMF1 1 dataset
ChIP HepG2 ENCFF605HHR 119 bp overlap
TOPORS 2 datasets
ChIP HepG2 ENCFF581ABM 88 bp overlap
ChIP HepG2 ENCFF581ABM 186 bp overlap
TP63 1 dataset
ChIP A549 ENCFF399JYQ 75 bp overlap
TSC22D1 1 dataset
ChIP HepG2 ENCFF357KSA 186 bp overlap
U2AF1L5,U2AF1 2 datasets
ChIP HepG2 ENCFF758IXU 186 bp overlap
ChIP HepG2 ENCFF758IXU 186 bp overlap
WIZ 1 dataset
ChIP HepG2 ENCFF559CYZ 115 bp overlap
YY1 3 datasets
ChIP ALL GSE145549.YY1.ALL 55 bp overlap
ChIP HepG2 ENCFF956MUY 186 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 94 bp overlap
ZBED5 1 dataset
ChIP HepG2 ENCFF991QZL 135 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 186 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 67 bp overlap
ZBTB4 1 dataset
ChIP HepG2 ENCFF828GZH 186 bp overlap
ZBTB7A 1 dataset
ChIP HEK293 ENCFF420MRZ 140 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCFF968PWB 125 bp overlap
ZNF146 1 dataset
ChIP HepG2 ENCFF383YDA 180 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 186 bp overlap
ChIP HepG2 ENCFF479ZIQ 186 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 150 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 140 bp overlap
ZNF24 2 datasets
ChIP HepG2 ENCFF357JVV 93 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 53 bp overlap
ZNF275 1 dataset
ChIP HepG2 ENCFF015JKD 143 bp overlap
ZNF362 3 datasets
ChIP HEK293 ENCFF436CGE 107 bp overlap
ChIP HEK293 ENCFF436CGE 167 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 186 bp overlap
ZNF384 5 datasets
ChIP GM12878 ENCFF229VSP 97 bp overlap
ChIP GM12878 ENCFF229VSP 186 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 135 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 119 bp overlap
ChIP HepG2 ENCFF129PLC 107 bp overlap
ZNF44 1 dataset
ChIP HepG2 ENCFF984YCN 186 bp overlap
ZNF460 1 dataset
ChIP HepG2 ENCFF007NNM 186 bp overlap
ZNF503 2 datasets
ChIP HepG2 ENCFF923HZL 186 bp overlap
ChIP HepG2 ENCFF923HZL 55 bp overlap
ZNF527 1 dataset
ChIP HepG2 ENCFF150XQG 186 bp overlap
ZNF577 1 dataset
ChIP HepG2 ENCFF980BRD 165 bp overlap
ZNF619 1 dataset
ChIP HepG2 ENCFF388NNO 186 bp overlap
ZNF800 1 dataset
ChIP HepG2 ENCFF840FYM 186 bp overlap
ZNF827 1 dataset
ChIP HepG2 ENCFF591ZUK 186 bp overlap
ZSCAN5A 1 dataset
ChIP HepG2 ENCFF633DFI 186 bp overlap
ZZZ3 1 dataset
ChIP HepG2 ENCFF784AAE 119 bp overlap