chr19 : 49,057,711 – 49,058,083
372 bp 107 TFs 3 linked genes
This 372 bp open chromatin element is linked to CGB7, NTF4, and ENSG00000283663 and is bound by 107 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CGB7 at TSS At TSS Proximity
NTF4 6.8 kb Proximal Proximity
ENSG00000283663 7.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:49,052,711 – 49,063,083
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
107 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 183 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 181 bp overlap
Ahr::Arnt 2 datasets
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 336 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 372 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 83 bp overlap
BRD4 1 dataset
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 283 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 332 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 230 bp overlap
CTCF 3 datasets
ChIP HFFc6 ENCFF005CJI 204 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 98 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 263 bp overlap
E2F1 2 datasets
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 167 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 263 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 145 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 136 bp overlap
ELF3 1 dataset
ChIP PDAC GSE64557.ELF3.PDAC 274 bp overlap
ERG 1 dataset
ChIP MCF-7 GSE23730.ERG.MCF-7 212 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 173 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 6 datasets
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 372 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 372 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 372 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 372 bp overlap
ChIP neural progenitor cell ENCFF472NFV 109 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 106 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 372 bp overlap
Elf5 1 dataset
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 372 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 310 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 130 bp overlap
GFI1 3 datasets
Motif DE_24h DE_24h-GFI1_MA0038.3 11 bp overlap
ChIP Hep-G2 ENCSR849FVL.GFI1.Hep-G2 181 bp overlap
ChIP HepG2 ENCFF472INF 365 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 215 bp overlap
GLIS2 1 dataset
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 266 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 309 bp overlap
Gfi1B 1 dataset
Motif DE_24h DE_24h-Gfi1B_MA0483.2 10 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 239 bp overlap
HIC2 1 dataset
Motif DE_24h DE_24h-HIC2_MA0738.2 6 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 191 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 187 bp overlap
HNRNPLL 1 dataset
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 340 bp overlap
HSF1 1 dataset
ChIP NCI-H838 GSE38901.HSF1.NCI-H838 207 bp overlap
IKZF2 1 dataset
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 74 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 179 bp overlap
JUN 3 datasets
ChIP HUES-8 GSE109524.JUN.HUES-8 311 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 286 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 281 bp overlap
KDM1A 3 datasets
ChIP K-562 GSE117944.KDM1A.K-562 221 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 236 bp overlap
ChIP K562 ENCFF128TYE 357 bp overlap
KDM2B 1 dataset
ChIP K562 ENCFF392YVR 223 bp overlap
KDM4A 4 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 372 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 165 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 184 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 197 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 154 bp overlap
KLF1 2 datasets
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
KLF10 3 datasets
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_24h DE_24h-KLF11_MA1512.2 10 bp overlap
KLF12 2 datasets
Motif DE_24h DE_24h-KLF12_MA0742.2 9 bp overlap
Motif DE_24h DE_24h-KLF12_MA0742.2 9 bp overlap
KLF14 3 datasets
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
KLF15 2 datasets
Motif DE_24h DE_24h-KLF15_MA1513.2 8 bp overlap
Motif DE_24h DE_24h-KLF15_MA1513.2 8 bp overlap
KLF16 1 dataset
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
KLF2 2 datasets
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF3 3 datasets
Motif DE_24h DE_24h-KLF3_MA1516.2 10 bp overlap
Motif DE_24h DE_24h-KLF3_MA1516.2 10 bp overlap
ChIP keratinocyte GSE140991.KLF3.keratinocyte 372 bp overlap
KLF4 1 dataset
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_24h DE_24h-KLF6_MA1517.2 9 bp overlap
KLF7 2 datasets
Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap
Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 138 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 293 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 218 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 348 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 257 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 233 bp overlap
PATZ1 1 dataset
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
PCBP1 3 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 230 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 197 bp overlap
ChIP K562 ENCFF382QWQ 372 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 372 bp overlap
POLR2A 9 datasets
ChIP H54 ENCFF398BXN 75 bp overlap
ChIP HCT116 ENCFF508RDJ 88 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 284 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 228 bp overlap
ChIP prostate gland ENCFF832RQK 202 bp overlap
ChIP prostate gland ENCFF881OMH 128 bp overlap
ChIP spleen ENCFF446ZGT 193 bp overlap
ChIP uterus ENCFF566ZPY 202 bp overlap
ChIP vagina ENCFF384GAB 303 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 250 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 190 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 372 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 219 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 341 bp overlap
Plagl1 1 dataset
Motif DE_24h DE_24h-Plagl1_MA1615.2 8 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 149 bp overlap
RBM39 3 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 353 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 301 bp overlap
ChIP HepG2 ENCFF801JUH 372 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 183 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 372 bp overlap
SMAD2_3 1 dataset
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 174 bp overlap
SMAD3 2 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 372 bp overlap
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 133 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 177 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 372 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 198 bp overlap
SP1 4 datasets
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
ChIP K562 ENCFF088XXV 372 bp overlap
ChIP WTC11 ENCFF688PEU 355 bp overlap
SP2 2 datasets
Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap
Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap
SP3 2 datasets
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
SP4 2 datasets
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
SP9 2 datasets
Motif DE_24h DE_24h-SP9_MA1564.2 10 bp overlap
Motif DE_24h DE_24h-SP9_MA1564.2 10 bp overlap
SPI1 1 dataset
ChIP monocyte GSE31621.SPI1.monocyte 114 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 272 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 372 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 249 bp overlap
STAT3 1 dataset
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 130 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 246 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 123 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 125 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 170 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 172 bp overlap
TARDBP 1 dataset
ChIP K-562 ENCSR429XTR.TARDBP.K-562 170 bp overlap
TCF12 2 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 252 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 298 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 271 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 317 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 192 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 178 bp overlap
ZBED4 2 datasets
Motif DE_24h DE_24h-ZBED4_MA2328.1 10 bp overlap
Motif DE_24h DE_24h-ZBED4_MA2328.1 10 bp overlap
ZBTB7A 4 datasets
ChIP Ishikawa ENCFF191NFH 372 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 317 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 97 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 95 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 125 bp overlap
ZFP14 1 dataset
Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap
ZIC5 1 dataset
ChIP HCT-116_WT-CT289 GSE127960.ZIC5.HCT-116_WT-CT289 272 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 158 bp overlap
ZNF148 1 dataset
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF263 2 datasets
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 124 bp overlap
ZNF281 1 dataset
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ZNF354C 1 dataset
Motif DE_24h DE_24h-ZNF354C_MA0130.1 6 bp overlap
ZNF444 1 dataset
ChIP MCF-7 ENCFF602QFR 133 bp overlap
ZNF449 1 dataset
Motif DE_24h DE_24h-ZNF449_MA1656.2 10 bp overlap
ZNF610 1 dataset
Motif DE_24h DE_24h-ZNF610_MA1713.2 10 bp overlap
ZNF682 2 datasets
Motif DE_24h DE_24h-ZNF682_MA1599.2 11 bp overlap
Motif DE_24h DE_24h-ZNF682_MA1599.2 11 bp overlap
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