chr19 : 45,814,954 45,815,368
414 bp 110 TFs 2 linked genes
This 414 bp open chromatin element is linked to RSPH6A and SYMPK and is bound by 110 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
RSPH6A at TSS At TSS Proximity
SYMPK 1.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:45,809,954 – 45,820,368
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
110 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 249 bp overlap
AGO1 4 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 260 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 265 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 367 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 352 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 414 bp overlap
ChIP HepG2 ENCFF773YDL 414 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 369 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 293 bp overlap
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 391 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 414 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 410 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 287 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 267 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 392 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 158 bp overlap
BRD4 6 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 414 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 185 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 154 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 185 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 191 bp overlap
ChIP hESC GSE33281.BRD4.hESC 66 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 370 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 381 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 232 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 185 bp overlap
CTCF 8 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF414GZI 118 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 98 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 207 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 402 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 187 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 62 bp overlap
ChIP nephron ENCFF589HXU 291 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 131 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 257 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 122 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 175 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 277 bp overlap
ChIP ME-1 GSE46044.ELF1.ME-1 152 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 159 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 125 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 198 bp overlap
ESR1 6 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 398 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 266 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 92 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 171 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 136 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 58 bp overlap
ESRRA 1 dataset
ChIP WTC11 ENCFF591YCA 320 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 125 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 200 bp overlap
EZH2 1 dataset
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 210 bp overlap
FIP1L1 2 datasets
ChIP K-562 GSE120104.FIP1L1.K-562 365 bp overlap
ChIP K-562 ENCSR177DNR.FIP1L1.K-562 336 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 252 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 358 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 414 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 273 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 145 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 398 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 191 bp overlap
HNRNPK 5 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 108 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 95 bp overlap
ChIP K-562 ENCSR014RCS.HNRNPK.K-562 119 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 84 bp overlap
ChIP K562 ENCFF954RNO 185 bp overlap
HNRNPL 2 datasets
ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 123 bp overlap
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 123 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 286 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 383 bp overlap
JUN 2 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 214 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 158 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 220 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 255 bp overlap
KDM4A 3 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 273 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 174 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 205 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 77 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 414 bp overlap
MED1 3 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 230 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 105 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 227 bp overlap
MYBL2 2 datasets
ChIP WTC11 ENCFF166TKT 375 bp overlap
ChIP WTC11 ENCFF166TKT 337 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 290 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 130 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 126 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 242 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 324 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 156 bp overlap
NFYB 1 dataset
ChIP WTC11 ENCFF751ZTQ 330 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 201 bp overlap
OGG1 3 datasets
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 341 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 333 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 335 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 298 bp overlap
PCBP1 2 datasets
ChIP K-562 ENCSR052PTN.PCBP1.K-562 290 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 247 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 304 bp overlap
POLR2A 5 datasets
ChIP GM12878 ENCFF521FXC 163 bp overlap
ChIP H1 ENCFF566JSR 414 bp overlap
ChIP PFSK-1 ENCFF576NIT 414 bp overlap
ChIP sigmoid colon ENCFF748YVT 244 bp overlap
ChIP spleen ENCFF706IUS 414 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 414 bp overlap
ChIP K562 ENCFF648YPL 414 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 292 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 306 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 283 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 414 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 272 bp overlap
RAD21 1 dataset
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 170 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 395 bp overlap
ChIP HepG2 ENCFF939HTZ 395 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 414 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 414 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 414 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 414 bp overlap
REST 1 dataset
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 183 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 241 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 410 bp overlap
RUNX1 1 dataset
ChIP ME-1 GSE46044.RUNX1.ME-1 120 bp overlap
RUVBL2 1 dataset
ChIP Huh-7 GSE97411.RUVBL2.Huh-7 297 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 355 bp overlap
RXRA 1 dataset
ChIP GM12878 ENCSR000BJD.RXRA.GM12878 59 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 414 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 315 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 206 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 115 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 113 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 122 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 170 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 179 bp overlap
SP4 3 datasets
ChIP H1 ENCFF473YOB 414 bp overlap
ChIP H1 ENCFF473YOB 301 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 102 bp overlap
SPI1 1 dataset
ChIP ME-1 GSE46044.SPI1.ME-1 213 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 414 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 334 bp overlap
SRSF4 2 datasets
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 241 bp overlap
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 218 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 367 bp overlap
STAT6 2 datasets
ChIP WTC11 ENCFF271RMR 268 bp overlap
ChIP WTC11 ENCFF271RMR 399 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 377 bp overlap
ChIP H1 ENCFF478SZO 52 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 242 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 157 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 162 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 258 bp overlap
TCF7 1 dataset
ChIP WTC11 ENCFF431UYL 334 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 297 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 292 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 234 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 369 bp overlap
TP53 1 dataset
ChIP WTC11 ENCFF359JCU 312 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 58 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 345 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 247 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 268 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 132 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 128 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 298 bp overlap
ZBTB43 2 datasets
ChIP WTC11 ENCFF058JUB 235 bp overlap
ChIP WTC11 ENCFF058JUB 414 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 235 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 376 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 251 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 198 bp overlap