chr19 : 13,825,841 13,826,041
200 bp 113 TFs 1 linked gene
This 200 bp open chromatin element is linked to ZSWIM4 and is bound by 113 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ZSWIM4 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:13,820,841 – 13,831,041
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_EGF GSE40632.AFF4.HeLa_EGF 147 bp overlap
AGO1 3 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 144 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 142 bp overlap
ChIP K562 ENCFF025NLP 200 bp overlap
AHR 1 dataset
ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 104 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 50 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 200 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 200 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 200 bp overlap
BRD3 2 datasets
ChIP K-562 GSE140325.BRD3.K-562 177 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD3.K-562_dilution-6-100 131 bp overlap
BRD4 6 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 200 bp overlap
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 115 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 200 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 83 bp overlap
ChIP hESC GSE33281.BRD4.hESC 74 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 198 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 110 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 200 bp overlap
CREB1 1 dataset
ChIP MDA-MB-134-VI GSE109103.CREB1.MDA-MB-134-VI 140 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 129 bp overlap
CTCF 14 datasets
ChIP CD14-positive monocyte ENCFF087XLR 74 bp overlap
ChIP GM06990 ENCFF471OQT 127 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 65 bp overlap
ChIP HFFc6 ENCFF005CJI 194 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 184 bp overlap
ChIP PC-9 ENCFF539ULB 200 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 200 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 200 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 62 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 59 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 200 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 169 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 103 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 164 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 136 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 200 bp overlap
ChIP K562 ENCFF622HMZ 200 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF813OXE 200 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 200 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 115 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 136 bp overlap
EGR1 1 dataset
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 171 bp overlap
ELF1 8 datasets
ChIP A-549 GSE122203.ELF1.A-549 136 bp overlap
ChIP GM12878 ENCFF432UGA 200 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 169 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 125 bp overlap
ChIP K-562 ENCSR502OEK.ELF1.K-562 200 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 185 bp overlap
ChIP K562 ENCFF457KVR 200 bp overlap
ChIP K562 ENCFF496AKI 200 bp overlap
ELL2 3 datasets
ChIP HeLa GSE40632.ELL2.HeLa 64 bp overlap
ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 200 bp overlap
ChIP HeLa_EGF GSE40632.ELL2.HeLa_EGF 186 bp overlap
ERG 2 datasets
ChIP SEM GSE117864.ERG.SEM 138 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 133 bp overlap
ESR1 7 datasets
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 157 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 98 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 200 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 200 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 190 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 78 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 75 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 137 bp overlap
FLI1 2 datasets
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 92 bp overlap
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 155 bp overlap
FOXA1 1 dataset
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 79 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 76 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 102 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR000BLO.GABPA.K-562 194 bp overlap
GABPB1 4 datasets
ChIP HepG2 ENCFF315AWN 157 bp overlap
ChIP K-562 ENCSR138YYY.GABPB1.K-562 200 bp overlap
ChIP K562 ENCFF885NMS 200 bp overlap
ChIP K562 ENCFF885NMS 200 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 64 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 125 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 186 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 94 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 200 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 200 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 200 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 95 bp overlap
HMGN3 2 datasets
ChIP K-562 ENCSR000DOB.HMGN3.K-562 70 bp overlap
ChIP K562 ENCFF083BIJ 93 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 126 bp overlap
HNRNPLL 6 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 168 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 147 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 200 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 200 bp overlap
ChIP K562 ENCFF541ZGX 200 bp overlap
ChIP K562 ENCFF598PWW 200 bp overlap
IKZF1 4 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 98 bp overlap
ChIP K562 ENCFF348IBL 200 bp overlap
ChIP K562 ENCFF771OHZ 96 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 84 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 200 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR000EGT.IRF1.K-562 190 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 200 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 200 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 200 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 187 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 200 bp overlap
KLF12 1 dataset
ChIP HEK293 GSE76494.KLF12.HEK293 200 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 162 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 200 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 118 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 200 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 139 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 200 bp overlap
KLF9 5 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 177 bp overlap
ChIP HEK293 ENCFF588INF 200 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 200 bp overlap
ChIP MCF-7 ENCFF618FCM 200 bp overlap
ChIP MCF-7 ENCSR125ZYC.KLF9.MCF-7 200 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 52 bp overlap
MAZ 5 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 120 bp overlap
ChIP IMR-90 ENCFF682IKN 200 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 200 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 200 bp overlap
ChIP K562 ENCFF333ZIV 200 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 200 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 77 bp overlap
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 126 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 200 bp overlap
MYBL2 3 datasets
ChIP A-673 GSE119971.MYBL2.A-673 155 bp overlap
ChIP MCF-10A_DOX GSE115787.MYBL2.MCF-10A_DOX 200 bp overlap
ChIP MCF-10A_ctrl GSE115787.MYBL2.MCF-10A_ctrl 112 bp overlap
MYCN 1 dataset
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 164 bp overlap
NCAPH2 3 datasets
ChIP HEK293 GSE97540.NCAPH2.HEK293 79 bp overlap
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 75 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 200 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 200 bp overlap
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 200 bp overlap
NRF1 5 datasets
ChIP K-562 ENCSR494TDU.NRF1.K-562 200 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 200 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 81 bp overlap
ChIP K562 ENCFF130SGK 200 bp overlap
ChIP K562 ENCFF689EWI 200 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 57 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 114 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 78 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 200 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 200 bp overlap
POLR2A 2 datasets
ChIP spleen ENCFF446ZGT 200 bp overlap
ChIP spleen ENCFF706IUS 200 bp overlap
POU2F1 3 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 200 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 200 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 200 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 169 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 200 bp overlap
RAD21 5 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 63 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 200 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 131 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 81 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 113 bp overlap
RBFOX2 1 dataset
ChIP K562 ENCFF196WTG 200 bp overlap
RBPJ 2 datasets
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 200 bp overlap
ChIP MDA-MB-157_GSI GSE116868.RBPJ.MDA-MB-157_GSI 200 bp overlap
RELA 2 datasets
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 127 bp overlap
ChIP WTC11 ENCFF874IIP 62 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 171 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 53 bp overlap
RUNX1 5 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 135 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 135 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 200 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 124 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 73 bp overlap
SAFB 2 datasets
ChIP K562 ENCFF765XSF 119 bp overlap
ChIP K562 ENCFF916WYW 119 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 75 bp overlap
SKIL 1 dataset
ChIP K-562 ENCSR336DXE.SKIL.K-562 188 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 141 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 197 bp overlap
SMARCB1 2 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 156 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 185 bp overlap
SMC3 7 datasets
ChIP GP5D GSE51234.SMC3.GP5D 180 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 139 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 139 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 139 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 196 bp overlap
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 147 bp overlap
ChIP K562 ENCFF582XIX 143 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 158 bp overlap
SP1 11 datasets
ChIP GM12878 ENCSR000BHK.SP1.GM12878 197 bp overlap
ChIP H1 ENCFF263FUH 136 bp overlap
ChIP HEK293 GSE76494.SP1.HEK293 200 bp overlap
ChIP HEK293T ERP007114.SP1.HEK293T 200 bp overlap
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 200 bp overlap
ChIP HepG2 ENCFF458MVB 200 bp overlap
ChIP K-562 ENCSR991ELG.SP1.K-562 200 bp overlap
ChIP K562 ENCFF088XXV 200 bp overlap
ChIP K562 ENCFF088XXV 200 bp overlap
ChIP K562 ENCFF907BMO 200 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 185 bp overlap
SP2 3 datasets
ChIP HEK293 ENCSR807LQP.SP2.HEK293 200 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 200 bp overlap
ChIP HEK293T ERP007114.SP2.HEK293T 200 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 200 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 186 bp overlap
SP4 2 datasets
ChIP HEK293 GSE76494.SP4.HEK293 200 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 200 bp overlap
SPI1 6 datasets
ChIP EM-3 GSE128834.SPI1.EM-3 110 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 200 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 115 bp overlap
ChIP K562 ENCFF410ORC 179 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 200 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 177 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 79 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 57 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 158 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 145 bp overlap
TBP 3 datasets
ChIP K-562 GSE55306.TBP.K-562 200 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 117 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 117 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 85 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 54 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 200 bp overlap
USF1 1 dataset
ChIP K562 ENCFF202SFC 200 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 200 bp overlap
ChIP K562 ENCFF828QYP 122 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 62 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 179 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 87 bp overlap
ZBTB7A 2 datasets
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 170 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 169 bp overlap
ZEB1 2 datasets
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 186 bp overlap
ChIP RKO GSE88734.ZEB1.RKO 147 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 200 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 148 bp overlap
ZNF266 3 datasets
ChIP HEK293 ENCFF483FIW 200 bp overlap
ChIP HEK293 ENCSR466VYP.ZNF266.HEK293 162 bp overlap
ChIP HEK293T GSE78099.ZNF266.HEK293T 200 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 200 bp overlap