chr15 : 86,489,838 86,490,456
618 bp 159 TFs 0 linked genes
This 618 bp open chromatin element has no linked target genes and is bound by 159 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:86,484,838 – 86,495,456
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
159 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
AR 2 datasets
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 153 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 182 bp overlap
ARGFX 1 dataset
Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap
ATF3 1 dataset
Motif DE_36h DE_36h-ATF3_MA0605.3 10 bp overlap
ATF4 1 dataset
Motif DE_36h DE_36h-ATF4_MA0833.3 10 bp overlap
ATF7 1 dataset
Motif DE_36h DE_36h-ATF7_MA0834.2 10 bp overlap
Atf1 1 dataset
Motif DE_36h DE_36h-Atf1_MA0604.1 8 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 180 bp overlap
BRD4 5 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 60 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 202 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 461 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 193 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 278 bp overlap
CBX4 1 dataset
ChIP HEK293T GSE53495.CBX4.HEK293T 270 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 124 bp overlap
CEBPG 1 dataset
Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap
CREM 1 dataset
Motif DE_36h DE_36h-CREM_MA0609.3 10 bp overlap
Creb5 1 dataset
Motif DE_36h DE_36h-Creb5_MA0840.2 10 bp overlap
DMRTA1 1 dataset
Motif DE_36h DE_36h-DMRTA1_MA1707.2 10 bp overlap
DRGX 1 dataset
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
EMX1 1 dataset
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 421 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 140 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 107 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 618 bp overlap
ESX1 1 dataset
Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
Elf5 1 dataset
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FOS 1 dataset
Motif DE_36h DE_36h-FOS_MA1951.2 13 bp overlap
FOS::JUN 1 dataset
Motif DE_36h DE_36h-FOSJUN_MA1126.2 10 bp overlap
FOSL2 1 dataset
Motif DE_36h DE_36h-FOSL2_MA0478.2 10 bp overlap
FOXA1 2 datasets
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 157 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 413 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 493 bp overlap
ChIP DE DE-FOXA2-2 537 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 68 bp overlap
GATA2 3 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 176 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 198 bp overlap
GATA3 4 datasets
ChIP BE2C GSE65664.GATA3.BE2C 241 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 333 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 286 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 245 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 618 bp overlap
ChIP DE DE-GATA4-2 618 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 556 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 556 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 448 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP DE DE-GATA6-1 618 bp overlap
ChIP DE DE-GATA6-2 618 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 618 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 618 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 618 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 618 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 618 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 618 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 618 bp overlap
ChIP foregut GSE117136.GATA6.foregut 546 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 443 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 455 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 549 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 438 bp overlap
GBX1 1 dataset
Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap
GSX1 1 dataset
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 433 bp overlap
Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 374 bp overlap
HOXA1 1 dataset
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
HOXB1 1 dataset
Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
HOXC8 1 dataset
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap
HSF1 1 dataset
Motif DE_60h DE_60h-HSF1_MA0486.2 13 bp overlap
HSF4 1 dataset
Motif DE_60h DE_60h-HSF4_MA0771.1 13 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
ISX 1 dataset
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
JDP2 1 dataset
Motif DE_36h DE_36h-JDP2_MA0656.2 10 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 367 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 93 bp overlap
JUNB 1 dataset
Motif DE_36h DE_36h-JUNB_MA1140.3 11 bp overlap
KLF3 1 dataset
ChIP HEK293 GSE69739.KLF3.HEK293 170 bp overlap
LBX1 1 dataset
Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap
LHX5 1 dataset
Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap
LHX9 1 dataset
Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap
LMX1A 1 dataset
Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap
Lhx4 1 dataset
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
MAFK 1 dataset
Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap
MEOX1 1 dataset
Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 356 bp overlap
MYCN 6 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 339 bp overlap
ChIP IMR-5_DMSO GSE78957.MYCN.IMR-5_DMSO 70 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 294 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 321 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 532 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 352 bp overlap
Mafg 1 dataset
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 224 bp overlap
NFKB2 2 datasets
ChIP L1236 GSE63736.NFKB2.L1236 284 bp overlap
ChIP L1236 GSE63736.NFKB2.L1236 54 bp overlap
NKX2-4 2 datasets
Motif DE_36h DE_36h-NKX2-4_MA2003.2 8 bp overlap
Motif DE_60h DE_60h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 2 datasets
Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap
Motif DE_60h DE_60h-NKX2-8_MA0673.2 8 bp overlap
NKX6-2 1 dataset
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 147 bp overlap
Nkx2-1 2 datasets
Motif DE_36h DE_36h-Nkx2-1_MA1994.2 7 bp overlap
Motif DE_60h DE_60h-Nkx2-1_MA1994.2 7 bp overlap
PDX1 1 dataset
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
PHOX2A 1 dataset
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 374 bp overlap
POU3F3 1 dataset
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
POU6F1 1 dataset
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
POU6F2 1 dataset
Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap
PROP1 1 dataset
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
PRRX1 1 dataset
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap
RAD21 1 dataset
ChIP IMR-5 GSE78957.RAD21.IMR-5 159 bp overlap
RAX2 1 dataset
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 183 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 411 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 411 bp overlap
SHOX 1 dataset
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 618 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 618 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 496 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 451 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 419 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 276 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 328 bp overlap
SMARCA4 4 datasets
ChIP NGP GSE134626.SMARCA4.NGP 180 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 178 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 141 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 391 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 202 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 224 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
SPIC 2 datasets
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Shox2 1 dataset
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 281 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 90 bp overlap
TCF7L1 1 dataset
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 4 datasets
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
ChIP HEK293 ENCFF513JQN 465 bp overlap
ChIP HEK293 ENCFF513JQN 266 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 467 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 176 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 176 bp overlap
TEF 1 dataset
Motif DE_36h DE_36h-TEF_MA0843.2 10 bp overlap
TFAP2B 2 datasets
ChIP SK-N-SH ENCFF869XXQ 426 bp overlap
ChIP SK-N-SH ENCFF869XXQ 221 bp overlap
TLX2 1 dataset
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
TP53 1 dataset
ChIP SaOS-2 ERP002038.TP53.SaOS-2 74 bp overlap
TRIM28 6 datasets
ChIP HEK293 ENCFF265CEM 489 bp overlap
ChIP HEK293 ENCFF582MWI 543 bp overlap
ChIP HEK293 ENCFF582MWI 332 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 449 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 360 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 376 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
TWIST1 1 dataset
Motif DE_36h DE_36h-TWIST1_MA1123.3 8 bp overlap
UNCX 1 dataset
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 499 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 561 bp overlap
Yy1 1 dataset
Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap
ZBTB26 1 dataset
Motif DE_36h DE_36h-ZBTB26_MA1579.2 8 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZFP42 1 dataset
Motif DE_36h DE_36h-ZFP42_MA1651.2 13 bp overlap
ZIC1 1 dataset
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
ZIM3 1 dataset
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
ZNF143 1 dataset
Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap
ZNF175 1 dataset
Motif DE_60h DE_60h-ZNF175_MA2332.1 9 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 543 bp overlap
ChIP HEK293 ENCFF336CWQ 341 bp overlap
ZNF282 1 dataset
Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap
ZNF317 1 dataset
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap
ZNF320 1 dataset
Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap
ZNF324 1 dataset
Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap
ZNF530 1 dataset
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
ZNF582 1 dataset
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
ZNF692 1 dataset
Motif DE_36h DE_36h-ZNF692_MA1986.2 8 bp overlap
ZNF75A 1 dataset
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
ZSCAN31 1 dataset
Motif DE_36h DE_36h-ZSCAN31_MA1722.2 18 bp overlap
Zic2 1 dataset
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
mix-a 1 dataset
Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap