chr1 : 120,844,267 – 120,844,527
260 bp 108 TFs 2 linked genes
This 260 bp open chromatin element is linked to RNVU1-19 and ENSG00000287979 and is bound by 108 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RNVU1-19 6.5 kb Proximal Proximity
ENSG00000287979 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:120,839,267 – 120,849,527
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP K562 ENCFF583EEH 260 bp overlap
ChIP K562 ENCFF583EEH 200 bp overlap
ARID3A 1 dataset
ChIP GM12878 ENCFF006WWZ 217 bp overlap
ARNT 1 dataset
ChIP K562 ENCFF291CXK 260 bp overlap
ATF1 2 datasets
ChIP K562 ENCFF817JQF 260 bp overlap
ChIP K562 ENCFF817JQF 260 bp overlap
ATF3 3 datasets
ChIP HCT116 ENCFF088WVX 62 bp overlap
ChIP K-562 ENCSR000BNU.ATF3.K-562 150 bp overlap
ChIP K562 ENCFF965VXT 63 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 260 bp overlap
ChIP K562 ENCFF308SKS 260 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 161 bp overlap
BDP1 2 datasets
ChIP K-562 ENCSR000DOK.BDP1.K-562 208 bp overlap
ChIP K562 ENCFF448WZN 230 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 217 bp overlap
BRD9 1 dataset
ChIP K562 ENCFF480JXZ 125 bp overlap
BRF1 2 datasets
ChIP H9 GSE94418.BRF1.H9 204 bp overlap
ChIP H9_Activin GSE94418.BRF1.H9_Activin 193 bp overlap
Bach1::Mafk 1 dataset
Motif DE_24h DE_24h-Bach1Mafk_MA0591.2 12 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCFF056JUS 249 bp overlap
CEBPB 1 dataset
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 145 bp overlap
CHD2 1 dataset
ChIP K562 ENCFF857WME 228 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCFF870CVH 235 bp overlap
ChIP GM12878 ENCFF870CVH 174 bp overlap
CREM 3 datasets
ChIP GM12878 ENCFF391UGE 238 bp overlap
ChIP K562 ENCFF180STA 215 bp overlap
ChIP K562 ENCFF180STA 109 bp overlap
CSDE1 1 dataset
ChIP K562 ENCFF313FYC 210 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 233 bp overlap
CTCF 28 datasets
ChIP 22Rv1 ENCFF466OXN 214 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 198 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 151 bp overlap
ChIP Peyer's patch ENCFF701KWW 260 bp overlap
ChIP Peyer's patch ENCFF701KWW 103 bp overlap
ChIP RWPE1 ENCFF200GQF 146 bp overlap
ChIP RWPE2 ENCFF911IEE 252 bp overlap
ChIP body of pancreas ENCFF438KTE 191 bp overlap
ChIP body of pancreas ENCFF798MEO 248 bp overlap
ChIP chondrocyte ENCFF134ORZ 199 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 107 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF749FBO 105 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF896AZK 67 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF974AQC 108 bp overlap
ChIP esophagus muscularis mucosa ENCFF421MEH 260 bp overlap
ChIP esophagus squamous epithelium ENCFF571ODZ 186 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 212 bp overlap
ChIP gastroesophageal sphincter ENCFF918KPI 260 bp overlap
ChIP prostate gland ENCFF979KAF 202 bp overlap
ChIP spleen ENCFF077XIZ 260 bp overlap
ChIP spleen ENCFF121QGK 260 bp overlap
ChIP thyroid gland ENCFF204HWS 126 bp overlap
ChIP tibial artery ENCFF882IXS 260 bp overlap
ChIP tibial nerve ENCFF665IWH 235 bp overlap
ChIP transverse colon ENCFF749DPF 260 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 185 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 157 bp overlap
ChIP upper lobe of left lung ENCFF962AIJ 243 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF057AIX 206 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 172 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 135 bp overlap
DEAF1 1 dataset
ChIP K562 ENCFF251RVO 152 bp overlap
E2F1 1 dataset
ChIP K562 ENCFF191BFW 260 bp overlap
ELF1 1 dataset
ChIP K562 ENCFF886KFV 260 bp overlap
EP300 2 datasets
ChIP GM12878 ENCFF242HCG 218 bp overlap
ChIP K562 ENCFF226VMS 195 bp overlap
ERF 1 dataset
ChIP K562 ENCFF626IQJ 260 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 195 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 88 bp overlap
ESRRA 1 dataset
ChIP K562 ENCFF968PEP 260 bp overlap
ETS1 3 datasets
ChIP GM12878 ENCFF019FEB 182 bp overlap
ChIP K-562 ENCSR000BKQ.ETS1.K-562 162 bp overlap
ChIP K562 ENCFF688UQG 260 bp overlap
FOSL2 1 dataset
ChIP SK-N-SH ENCFF127ZDW 160 bp overlap
FOXM1 1 dataset
ChIP K562 ENCFF490XGT 260 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 73 bp overlap
GABPA 2 datasets
ChIP GM12878 ENCFF872TWR 236 bp overlap
ChIP K562 ENCFF139LXS 115 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF885NMS 260 bp overlap
GABPB2 1 dataset
ChIP K562 ENCFF940MNT 176 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 96 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF705LHX 260 bp overlap
GTF2F1 1 dataset
ChIP K562 ENCFF940JZP 260 bp overlap
GTF3C2 2 datasets
ChIP K-562 ENCSR000DOD.GTF3C2.K-562 160 bp overlap
ChIP K562 ENCFF396ZJP 81 bp overlap
HDAC1 2 datasets
ChIP K562 ENCFF386RRT 260 bp overlap
ChIP K562 ENCFF968WBH 260 bp overlap
HMBOX1 2 datasets
ChIP K562 ENCFF055GAZ 194 bp overlap
ChIP K562 ENCFF317JJX 153 bp overlap
HMGXB4 2 datasets
ChIP HepG2 ENCFF179TAD 201 bp overlap
ChIP K562 ENCFF620JLK 260 bp overlap
HNRNPLL 5 datasets
ChIP HepG2 ENCFF355PIC 175 bp overlap
ChIP HepG2 ENCFF952XAB 97 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 198 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 198 bp overlap
ChIP K562 ENCFF598PWW 190 bp overlap
IKZF1 6 datasets
ChIP GM12878 ENCFF753XDO 194 bp overlap
ChIP GM12878 ENCFF824TGK 81 bp overlap
ChIP K562 ENCFF348IBL 90 bp overlap
ChIP K562 ENCFF348IBL 216 bp overlap
ChIP K562 ENCFF771OHZ 200 bp overlap
ChIP K562 ENCFF771OHZ 260 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF238LYK 260 bp overlap
ChIP GM12878 ENCFF918AID 260 bp overlap
KDM5B 1 dataset
ChIP K562 ENCFF049WWX 202 bp overlap
KLF15 1 dataset
Motif DE_24h DE_24h-KLF15_MA1513.2 8 bp overlap
KLF5 1 dataset
ChIP GM12878 ENCFF570KBU 213 bp overlap
MAX 2 datasets
ChIP K562 ENCFF524IJO 260 bp overlap
ChIP MCF-7 ENCFF169IXS 260 bp overlap
MAZ 2 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 89 bp overlap
ChIP K562 ENCFF982GSZ 260 bp overlap
MEIS2 1 dataset
ChIP K562 ENCFF320GSD 122 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 258 bp overlap
MTA1 1 dataset
ChIP K562 ENCFF230ZKA 259 bp overlap
MTA3 1 dataset
ChIP K562 ENCFF289UFB 260 bp overlap
Mafg 1 dataset
Motif DE_24h DE_24h-Mafg_MA0659.4 12 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 260 bp overlap
ChIP GM12878 ENCFF213ZNN 244 bp overlap
NCOA2 1 dataset
ChIP K562 ENCFF365JLH 194 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 179 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 135 bp overlap
NRF1 3 datasets
ChIP K562 ENCFF130SGK 124 bp overlap
ChIP K562 ENCFF689EWI 260 bp overlap
ChIP K562 ENCFF791UHF 260 bp overlap
PBX3 3 datasets
ChIP GM12878 ENCFF285BQQ 180 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 93 bp overlap
ChIP SK-N-SH ENCFF876BMC 137 bp overlap
PHF8 2 datasets
ChIP HepG2 ENCFF065NWR 166 bp overlap
ChIP K562 ENCFF217UCA 260 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCFF589FCY 202 bp overlap
ChIP K562 ENCFF236IUS 255 bp overlap
POLR2A 18 datasets
ChIP H54 ENCFF398BXN 222 bp overlap
ChIP HCT116 ENCFF508RDJ 260 bp overlap
ChIP K562 ENCFF215CWW 260 bp overlap
ChIP K562 ENCFF262YXJ 260 bp overlap
ChIP Panc1 ENCFF290KAB 155 bp overlap
ChIP body of pancreas ENCFF675RCN 260 bp overlap
ChIP breast epithelium ENCFF045XXN 260 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 101 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 243 bp overlap
ChIP prostate gland ENCFF881OMH 148 bp overlap
ChIP sigmoid colon ENCFF748YVT 260 bp overlap
ChIP spleen ENCFF446ZGT 260 bp overlap
ChIP spleen ENCFF706IUS 260 bp overlap
ChIP stomach ENCFF820WZN 260 bp overlap
ChIP thyroid gland ENCFF979LRR 207 bp overlap
ChIP transverse colon ENCFF193UMS 260 bp overlap
ChIP transverse colon ENCFF607LKE 244 bp overlap
ChIP upper lobe of left lung ENCFF504HCM 260 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 260 bp overlap
POLR2H 2 datasets
ChIP K562 ENCFF377NHG 260 bp overlap
ChIP K562 ENCFF377NHG 260 bp overlap
POLR3A 1 dataset
ChIP K562 ENCFF452GCM 260 bp overlap
POLR3G 1 dataset
ChIP K562 ENCFF894FTD 196 bp overlap
POU2F2 1 dataset
ChIP GM12878 ENCFF207RKY 203 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 106 bp overlap
RB1 1 dataset
ChIP K562 ENCFF627ZBG 220 bp overlap
RBFOX2 2 datasets
ChIP K562 ENCFF196WTG 260 bp overlap
ChIP K562 ENCFF967GRF 260 bp overlap
RELB 1 dataset
ChIP GM12878 ENCFF217ADF 260 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF061ATI 260 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 88 bp overlap
SKIL 2 datasets
ChIP K562 ENCFF560QSF 260 bp overlap
ChIP K562 ENCFF560QSF 260 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 260 bp overlap
SMARCA5 1 dataset
ChIP GM12878 ENCFF327LDR 260 bp overlap
SP1 2 datasets
ChIP K562 ENCFF088XXV 260 bp overlap
ChIP K562 ENCFF088XXV 260 bp overlap
SREBF2 2 datasets
ChIP GM12878 ENCFF670DYX 251 bp overlap
ChIP GM12878 ENCSR000DYT.SREBF2.GM12878 197 bp overlap
STAT3 1 dataset
ChIP SU-DHL-2 GSE50723.STAT3.SU-DHL-2 101 bp overlap
TAF7 1 dataset
ChIP K562 ENCFF314WLE 260 bp overlap
TARDBP 7 datasets
ChIP GM12878 ENCFF701YIT 218 bp overlap
ChIP GM12878 ENCFF866POT 260 bp overlap
ChIP K-562 GSE120104.TARDBP.K-562 218 bp overlap
ChIP K-562 ENCSR429XTR.TARDBP.K-562 218 bp overlap
ChIP K562 ENCFF021QCU 156 bp overlap
ChIP K562 ENCFF059WCS 212 bp overlap
ChIP K562 ENCFF623QJS 214 bp overlap
TBL1XR1 1 dataset
ChIP K562 ENCFF783QLQ 234 bp overlap
TBP 9 datasets
ChIP GM12878 ENCFF571OXR 151 bp overlap
ChIP GM12878 ENCSR000DZZ.TBP.GM12878 227 bp overlap
ChIP H1 ENCFF859IIO 186 bp overlap
ChIP Hep-G2 ENCSR000EEL.TBP.Hep-G2 189 bp overlap
ChIP HepG2 ENCFF023IVD 229 bp overlap
ChIP K-562 GSE55306.TBP.K-562 260 bp overlap
ChIP K-562 ENCSR000EHA.TBP.K-562 215 bp overlap
ChIP K562 ENCFF901UYM 149 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 142 bp overlap
TEAD4 3 datasets
ChIP Ishikawa ENCFF772OTG 208 bp overlap
ChIP K562 ENCFF673NIK 143 bp overlap
ChIP SK-N-SH ENCFF754TJT 260 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 260 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 89 bp overlap
UBTF 1 dataset
ChIP K562 ENCFF174SPM 246 bp overlap
ZBED4 1 dataset
Motif DE_24h DE_24h-ZBED4_MA2328.1 10 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 260 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCFF346DYM 242 bp overlap
ChIP K562 ENCFF521DSV 260 bp overlap
ZBTB5 1 dataset
ChIP K562 ENCFF856PUG 260 bp overlap
ZBTB7A 1 dataset
ChIP K562 ENCFF579ZGM 182 bp overlap
ZBTB8A 2 datasets
ChIP K562 ENCFF399HPQ 260 bp overlap
ChIP K562 ENCFF797ZJZ 260 bp overlap
ZEB2 1 dataset
ChIP K562 ENCFF795CMH 260 bp overlap
ZFX 4 datasets
ChIP HepG2 ENCFF016NZF 260 bp overlap
ChIP HepG2 ENCFF016NZF 131 bp overlap
ChIP K562 ENCFF169LZT 260 bp overlap
ChIP K562 ENCFF536AJO 260 bp overlap
ZNF217 1 dataset
ChIP GM12878 ENCFF978IGL 260 bp overlap
ZNF24 2 datasets
ChIP GM12878 ENCFF688STO 192 bp overlap
ChIP K562 ENCFF877JCX 260 bp overlap
ZNF263 2 datasets
ChIP K562 ENCFF640RNA 260 bp overlap
ChIP K562 ENCFF640RNA 260 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 217 bp overlap
ZNF407 1 dataset
ChIP K562 ENCFF568QZW 215 bp overlap
ZNF592 1 dataset
ChIP K562 ENCFF547OSS 260 bp overlap
ZNF7 1 dataset
ChIP K562 ENCFF096OHS 256 bp overlap
ZSCAN29 1 dataset
ChIP GM12878 ENCFF983OKU 187 bp overlap
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