chr6 : 144,007,258 144,007,418
160 bp 104 TFs 2 linked genes
This 160 bp open chromatin element is linked to HYMAI and PLAGL1 and is bound by 104 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
HYMAI 843 bp At TSS Proximity
PLAGL1 965 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:144,002,258 – 144,012,418
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
ADNP 2 datasets
ChIP K562 ENCFF492SKF 160 bp overlap
ChIP K562 ENCFF492SKF 138 bp overlap
AFF4 2 datasets
ChIP HeLa GSE40632.AFF4.HeLa 143 bp overlap
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 151 bp overlap
AR 5 datasets
ChIP VCaP GSE148358.AR.VCaP 56 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 123 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 59 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 136 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 143 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 129 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 77 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 90 bp overlap
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 104 bp overlap
BRD2 6 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 160 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 152 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 160 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 137 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 160 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 160 bp overlap
BRD3 4 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 160 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 160 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 144 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 145 bp overlap
BRD4 14 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 150 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 101 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 160 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 160 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 80 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 160 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 160 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 150 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 158 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 160 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 160 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 132 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 60 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 157 bp overlap
BRD9 1 dataset
ChIP K-562 ENCSR177XCS.BRD9.K-562 105 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 124 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 107 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 132 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 159 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 160 bp overlap
EGR1 7 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 89 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 139 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 133 bp overlap
ChIP K562 ENCFF006PJY 160 bp overlap
ChIP K562 ENCFF895KGN 72 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 134 bp overlap
ChIP fibroblast_DOX-CLOB-24h GSE134924.EGR1.fibroblast_DOX-CLOB-24h 144 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 160 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 126 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 160 bp overlap
ERG 2 datasets
ChIP SKNO-1 GSE23730.ERG.SKNO-1 160 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 145 bp overlap
EZH2 8 datasets
ChIP GM23338 ENCFF613YON 160 bp overlap
ChIP H1 ENCFF232NZA 160 bp overlap
ChIP HepG2 ENCFF912EIW 160 bp overlap
ChIP HepG2 ENCFF912EIW 160 bp overlap
ChIP HepG2 ENCFF912EIW 160 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 160 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 160 bp overlap
ChIP neural progenitor cell ENCFF018MKA 160 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 160 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 160 bp overlap
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 160 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 155 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 111 bp overlap
FOXJ2 1 dataset
ChIP K562 ENCFF457GZC 160 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 160 bp overlap
ChIP erythroblast ENCFF867JAR 160 bp overlap
ChIP erythroblast ENCFF867JAR 148 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 160 bp overlap
GATA2 9 datasets
ChIP ESF GSE108408.GATA2.ESF 141 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 160 bp overlap
ChIP SH-SY5Y ENCFF485YIB 60 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 160 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 153 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 90 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 160 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 160 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 160 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 105 bp overlap
ChIP DE DE-GATA4-2 160 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 67 bp overlap
ChIP foregut GSE117136.GATA4.foregut 160 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 160 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 160 bp overlap
GATA6 7 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 160 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 160 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 160 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 160 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 153 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 160 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 67 bp overlap
GLIS2 1 dataset
ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 160 bp overlap
HDAC2 3 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 123 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 97 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 144 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 124 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 160 bp overlap
HKR1 1 dataset
ChIP HEK293T GSE78099.HKR1.HEK293T 160 bp overlap
HOXB13 5 datasets
ChIP 22Rv1 GSE96652.HOXB13.22Rv1 151 bp overlap
ChIP 22Rv1 GSE129951.HOXB13.22Rv1 123 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 94 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 64 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 107 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 56 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 160 bp overlap
INO80 1 dataset
ChIP Hep-G2 GSE107730.INO80.Hep-G2 76 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 159 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 160 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 61 bp overlap
JUNB 3 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 160 bp overlap
ChIP HAEC GSE89970.JUNB.HAEC 149 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 84 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 111 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 160 bp overlap
KMT2A 2 datasets
ChIP HEK293T_C-term_shCtrl GSE90762.KMT2A.HEK293T_C-term_shCtrl 160 bp overlap
ChIP MCF-7_C-term_DMSO GSE90762.KMT2A.MCF-7_C-term_DMSO 103 bp overlap
KMT2B 2 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2B.HEK293T_C-term_C104 160 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2B.HEK293T_C-term_C49 160 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 85 bp overlap
ChIP HEK293T ENCFF482NJV 160 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 101 bp overlap
MAF 1 dataset
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 160 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 136 bp overlap
MAX 1 dataset
ChIP K562 ENCFF110LJS 160 bp overlap
MAZ 5 datasets
ChIP IMR-90 ENCFF682IKN 160 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 160 bp overlap
ChIP K-562 ENCSR163IUV.MAZ.K-562 160 bp overlap
ChIP K562 ENCFF333ZIV 160 bp overlap
ChIP K562 ENCFF982GSZ 160 bp overlap
MED1 3 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 160 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 160 bp overlap
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 160 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 57 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 160 bp overlap
MLLT3 1 dataset
ChIP THP-1 GSE79899.MLLT3.THP-1 123 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 129 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 116 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 117 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 160 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 160 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 113 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 160 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 160 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 160 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 160 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 160 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 160 bp overlap
POLR2A 2 datasets
ChIP erythroblast ENCFF498VMR 64 bp overlap
ChIP erythroblast ENCFF498VMR 160 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 160 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 95 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 160 bp overlap
RAD21 2 datasets
ChIP LoVo_PHASEM GSE51290.RAD21.LoVo_PHASEM 126 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 134 bp overlap
RNF2 2 datasets
ChIP HUES-64 GSE104059.RNF2.HUES-64 160 bp overlap
ChIP K562 ENCFF653BQJ 83 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 160 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 153 bp overlap
SIN3A 2 datasets
ChIP K562 ENCFF984TCS 160 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 140 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 100 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 154 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 160 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 119 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 121 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 121 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 160 bp overlap
STAT3 15 datasets
ChIP FaDu_DMSO GSE78212.STAT3.FaDu_DMSO 160 bp overlap
ChIP HCC1937 GSE152203.STAT3.HCC1937 65 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 141 bp overlap
ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 148 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 138 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 160 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 160 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 160 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 105 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.STAT3.MCF10A-Er-Src_EtOH 123 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 139 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 135 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 154 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 160 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 160 bp overlap
STAT5A 1 dataset
ChIP MV4-11 GSE64862.STAT5A.MV4-11 103 bp overlap
SUZ12 5 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 141 bp overlap
ChIP H1 ENCFF881NFR 160 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 160 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 160 bp overlap
ChIP NT2/D1 ENCFF574SXS 78 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 147 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 126 bp overlap
TCF7L2 1 dataset
ChIP HEK293 ENCFF513JQN 142 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF794ZXJ 160 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 156 bp overlap
ChIP K562 ENCFF053XDV 160 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 160 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 160 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 160 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 160 bp overlap
ZBTB7A 5 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 160 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 146 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 148 bp overlap
ChIP K562 ENCFF579ZGM 149 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 160 bp overlap
ZFP14 1 dataset
ChIP HEK293T GSE78099.ZFP14.HEK293T 152 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 132 bp overlap
ZNF263 1 dataset
ChIP HEK293T GSE78099.ZNF263.HEK293T 160 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 160 bp overlap
ZNF468 1 dataset
ChIP HEK293T GSE78099.ZNF468.HEK293T 160 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 155 bp overlap