chr5 : 124,737,295 – 124,737,976
681 bp 118 TFs 1 linked gene
This 681 bp open chromatin element is linked to ZNF608 and is bound by 118 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF608 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:124,732,295 – 124,742,976
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
118 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 566 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 369 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 310 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 386 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 246 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 163 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 109 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 175 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 53 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 148 bp overlap
BRD4 7 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 214 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 292 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 275 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 247 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 125 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 207 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 196 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CBX2 2 datasets
ChIP K-562 ENCSR000ATU.CBX2.K-562 135 bp overlap
ChIP K-562 ENCSR000ATU.CBX2.K-562 296 bp overlap
CDK9 1 dataset
ChIP Kelly_DMSO GSE107126.CDK9.Kelly_DMSO 184 bp overlap
CEBPB 1 dataset
ChIP H1 ENCFF871PTR 261 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 479 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 613 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 263 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 152 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 392 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 333 bp overlap
EBF1 5 datasets
ChIP GM12878 ENCFF167CZS 187 bp overlap
ChIP GM12878 ENCFF813OXE 170 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 119 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 531 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 179 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
EP300 3 datasets
ChIP 697 GSE138031.EP300.697 182 bp overlap
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 270 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 98 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 181 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 329 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 122 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 240 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 287 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 216 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 401 bp overlap
HLF 1 dataset
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF449HPV 414 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 425 bp overlap
Hand1::Tcf3 1 dataset
Motif DE_12h DE_12h-Hand1Tcf3_MA0092.2 9 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 681 bp overlap
IKZF3 3 datasets
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 74 bp overlap
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 204 bp overlap
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 395 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 505 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 395 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 377 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 127 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 86 bp overlap
KLF4 3 datasets
ChIP HAP1 GSE130417.KLF4.HAP1 192 bp overlap
ChIP WA09 GSE105028.KLF4.WA09 333 bp overlap
ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 233 bp overlap
LEF1 2 datasets
ChIP hESC GSE64758.LEF1.hESC 246 bp overlap
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 331 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MED1 2 datasets
ChIP OCI-Ly1 GSE53601.MED1.OCI-Ly1 551 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 681 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 317 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 165 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 196 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 353 bp overlap
ChIP H1 ENCFF747ZPQ 86 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 681 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 498 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 371 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 681 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 681 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 610 bp overlap
ChIP hESC GSE18292.NANOG.hESC 265 bp overlap
ChIP hESC GSE20650.NANOG.hESC 291 bp overlap
NEUROD1 1 dataset
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
NFATC1 1 dataset
ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 151 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 349 bp overlap
NIPBL 6 datasets
ChIP WA09 GSE105028.NIPBL.WA09 601 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 572 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 240 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 358 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 310 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 311 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Nr5A2 1 dataset
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 50 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 93 bp overlap
PBX1 1 dataset
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 184 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F3 2 datasets
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 176 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 186 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 14 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 319 bp overlap
ChIP GM23338 ENCFF333SNB 88 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 681 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 556 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 681 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 213 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 434 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 453 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 297 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 449 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 681 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 283 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 331 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 86 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 232 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 308 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 340 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 271 bp overlap
RUNX1 1 dataset
ChIP 697 GSE138031.RUNX1.697 367 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 318 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 443 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 415 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 287 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 217 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 330 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 468 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 455 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 425 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 365 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 221 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 138 bp overlap
SMARCA4 13 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 287 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 252 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 256 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 209 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 367 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 296 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 198 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 353 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 188 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 291 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 438 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 681 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 681 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 585 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 623 bp overlap
SMARCC1 6 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 109 bp overlap
ChIP DE_D1 S10-DE-d1-BAF155-exp1 464 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 267 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 238 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 681 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 681 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 175 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 262 bp overlap
ChIP hESC GSE69479.SOX2.hESC 264 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 332 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 308 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 437 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 54 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 56 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 309 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 274 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 300 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 2 datasets
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 404 bp overlap
ChIP Panc1 ENCFF829HHL 475 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 360 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 444 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 284 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 506 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 117 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 185 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCFF847JIE 194 bp overlap
ZNF101 1 dataset
ChIP HEK293 ENCSR462FWS.ZNF101.HEK293 76 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 327 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 64 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 121 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 334 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF429 1 dataset
ChIP HEK293T GSE78099.ZNF429.HEK293T 107 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF600 2 datasets
ChIP HEK293 ENCFF785JSX 125 bp overlap
ChIP HEK293 ENCFF785JSX 129 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 249 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 206 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZNF8 1 dataset
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap
Huangfu Lab · Publications · Resources · Contact