chr5 : 32,474,004 32,474,924
920 bp 130 TFs 5 linked genes
This 920 bp open chromatin element is linked to 5 target genes and is bound by 130 transcription factors.
Linked Genes
5 genes
Link type
Gene Expression Dist. to TSS Distance Link type
ZFR 29.6 kb Distal Multiome
SUB1 111.2 kb Distal Multiome+HiCAR
MTMR12 161.4 kb Distal Multiome
GOLPH3 300.1 kb Distal Multiome
GOLPH3-DT 300.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:32,469,004 – 32,479,924
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
130 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 330 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 456 bp overlap
Atoh1 1 dataset
Motif DE_72h DE_72h-Atoh1_MA1467.3 7 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 280 bp overlap
BRD4 3 datasets
ChIP Hep-G2 GSE123097.BRD4.Hep-G2 580 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 201 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 168 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 161 bp overlap
CDK6 2 datasets
ChIP KB_IL GSE52469.CDK6.KB_IL 105 bp overlap
ChIP KB_IL GSE52469.CDK6.KB_IL 75 bp overlap
CDX2 3 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 219 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 191 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 479 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 177 bp overlap
CREB1 2 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 208 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 247 bp overlap
CTCF 1 dataset
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 178 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF262VBH 264 bp overlap
ChIP BLaER1 ENCFF844FIP 251 bp overlap
ChIP BLaER1 ENCFF896HSY 251 bp overlap
DUX4 2 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EBF1 3 datasets
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
Motif DE_48h DE_48h-EBF1_MA0154.5 11 bp overlap
Motif DE_72h DE_72h-EBF1_MA0154.5 11 bp overlap
ESR1 3 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 378 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 311 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 307 bp overlap
Ebf4 3 datasets
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
Motif DE_48h DE_48h-Ebf4_MA2122.1 11 bp overlap
Motif DE_72h DE_72h-Ebf4_MA2122.1 11 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCFF528YED 441 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 193 bp overlap
ChIP DE DE-FOXA2-1 646 bp overlap
ChIP DE DE-FOXA2-2 668 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 651 bp overlap
ChIP DE DE-GATA4-2 707 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 328 bp overlap
ChIP foregut GSE117136.GATA4.foregut 674 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 683 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 443 bp overlap
GATA5 2 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 198 bp overlap
ChIP DE DE-GATA6-1 660 bp overlap
ChIP DE DE-GATA6-2 707 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 464 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 451 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 406 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 571 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 545 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 554 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 423 bp overlap
ChIP foregut GSE117136.GATA6.foregut 595 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 552 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 471 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 647 bp overlap
GFI1B 2 datasets
ChIP HEK293 ENCFF264FBS 325 bp overlap
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 210 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 385 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 605 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 198 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 112 bp overlap
Gata3 2 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 417 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 327 bp overlap
HNF4A 6 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 370 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 239 bp overlap
Motif DE_36h DE_36h-HNF4A_MA1494.2 14 bp overlap
Motif DE_48h DE_48h-HNF4A_MA1494.2 14 bp overlap
Motif DE_72h DE_72h-HNF4A_MA1494.2 14 bp overlap
ChIP hiPSC GSE104613.HNF4A.hiPSC 319 bp overlap
HOXB13 1 dataset
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 261 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCFF518OXG 371 bp overlap
IRF3 2 datasets
Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap
Motif DE_72h DE_72h-IRF3_MA1418.2 17 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 599 bp overlap
LIN54 2 datasets
Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap
Motif DE_48h DE_48h-LIN54_MA0619.2 7 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 257 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 333 bp overlap
MEIS1 3 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 225 bp overlap
MXI1 1 dataset
Motif DE_72h DE_72h-MXI1_MA1108.3 6 bp overlap
MYB 3 datasets
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
Motif DE_72h DE_72h-MYB_MA0100.4 6 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 135 bp overlap
ChIP NCI-H128 GSE41105.MYC.NCI-H128 229 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 233 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 431 bp overlap
Mecom 3 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 141 bp overlap
NFATC3 1 dataset
Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap
NFYB 3 datasets
Motif DE_36h DE_36h-NFYB_MA0502.3 9 bp overlap
Motif DE_48h DE_48h-NFYB_MA0502.3 9 bp overlap
Motif DE_72h DE_72h-NFYB_MA0502.3 9 bp overlap
NR1D2 2 datasets
Motif DE_36h DE_36h-NR1D2_MA1532.2 15 bp overlap
Motif DE_48h DE_48h-NR1D2_MA1532.2 15 bp overlap
NR1H2::RXRA 3 datasets
Motif DE_36h DE_36h-NR1H2RXRA_MA0115.1 17 bp overlap
Motif DE_48h DE_48h-NR1H2RXRA_MA0115.1 17 bp overlap
Motif DE_72h DE_72h-NR1H2RXRA_MA0115.1 17 bp overlap
NR2F1 3 datasets
Motif DE_36h DE_36h-NR2F1_MA1537.2 13 bp overlap
Motif DE_48h DE_48h-NR2F1_MA1537.2 13 bp overlap
Motif DE_72h DE_72h-NR2F1_MA1537.2 13 bp overlap
Nfatc1 1 dataset
Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_72h DE_72h-Nfatc2_MA0152.3 8 bp overlap
Nr2e3 2 datasets
Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_72h DE_72h-Nr2e3_MA0164.2 6 bp overlap
Nr2f6 3 datasets
Motif DE_36h DE_36h-Nr2f6_MA0677.2 13 bp overlap
Motif DE_48h DE_48h-Nr2f6_MA0677.2 13 bp overlap
Motif DE_72h DE_72h-Nr2f6_MA0677.2 13 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 249 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 424 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 229 bp overlap
PAX1 3 datasets
Motif DE_36h DE_36h-PAX1_MA0779.2 16 bp overlap
Motif DE_48h DE_48h-PAX1_MA0779.2 16 bp overlap
Motif DE_72h DE_72h-PAX1_MA0779.2 16 bp overlap
PAX6 2 datasets
Motif DE_36h DE_36h-PAX6_MA0069.1 14 bp overlap
Motif DE_72h DE_72h-PAX6_MA0069.1 14 bp overlap
PAX9 3 datasets
Motif DE_36h DE_36h-PAX9_MA0781.2 16 bp overlap
Motif DE_48h DE_48h-PAX9_MA0781.2 16 bp overlap
Motif DE_72h DE_72h-PAX9_MA0781.2 16 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 236 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 233 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 276 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 386 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 592 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 159 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 854 bp overlap
PKNOX1 1 dataset
ChIP HEK293T ENCFF174WDB 391 bp overlap
PKNOX2 3 datasets
Motif DE_36h DE_36h-PKNOX2_MA0783.1 12 bp overlap
Motif DE_48h DE_48h-PKNOX2_MA0783.1 12 bp overlap
Motif DE_72h DE_72h-PKNOX2_MA0783.1 12 bp overlap
PLAG1 2 datasets
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
Motif DE_48h DE_48h-PLAG1_MA0163.1 14 bp overlap
PPARA::RXRA 3 datasets
Motif DE_36h DE_36h-PPARARXRA_MA1148.2 17 bp overlap
Motif DE_48h DE_48h-PPARARXRA_MA1148.2 17 bp overlap
Motif DE_72h DE_72h-PPARARXRA_MA1148.2 17 bp overlap
PPARG 2 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 175 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 252 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 421 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 284 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 346 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 380 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 246 bp overlap
Pparg::Rxra 3 datasets
Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_72h DE_72h-PpargRxra_MA0065.3 13 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 228 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 435 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 216 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 195 bp overlap
Motif DE_72h DE_72h-RELA_MA0107.1 10 bp overlap
RXRA 4 datasets
ChIP H1 ENCFF570NHK 201 bp overlap
ChIP JMSU-1 GSE107734.RXRA.JMSU-1 200 bp overlap
ChIP JMSU-1_RXRA-S427F GSE107734.RXRA.JMSU-1_RXRA-S427F 150 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 166 bp overlap
RXRB 3 datasets
Motif DE_36h DE_36h-RXRB_MA0855.1 14 bp overlap
Motif DE_48h DE_48h-RXRB_MA0855.1 14 bp overlap
Motif DE_72h DE_72h-RXRB_MA0855.1 14 bp overlap
RXRG 3 datasets
Motif DE_36h DE_36h-RXRG_MA0856.1 14 bp overlap
Motif DE_48h DE_48h-RXRG_MA0856.1 14 bp overlap
Motif DE_72h DE_72h-RXRG_MA0856.1 14 bp overlap
Rhox11 2 datasets
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
Rxra 3 datasets
Motif DE_36h DE_36h-Rxra_MA0512.2 14 bp overlap
Motif DE_48h DE_48h-Rxra_MA0512.2 14 bp overlap
Motif DE_72h DE_72h-Rxra_MA0512.2 14 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 559 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 344 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 448 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 188 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 250 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 336 bp overlap
TFAP2A 2 datasets
Motif DE_48h DE_48h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_72h DE_72h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_72h DE_72h-TFAP2C_MA0814.3 9 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 119 bp overlap
TRPS1 2 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
TWIST1 1 dataset
Motif DE_72h DE_72h-TWIST1_MA1123.3 8 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 278 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 354 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 535 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 631 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 237 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 378 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 382 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 511 bp overlap
ZIM3 1 dataset
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ZNF143 3 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 176 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 270 bp overlap
ChIP HeLa GSE39263.ZNF143.HeLa 197 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 441 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 316 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 315 bp overlap
ChIP HEK293 ENCFF638TIB 501 bp overlap
ZNF257 2 datasets
ChIP HEK293 GSE76494.ZNF257.HEK293 160 bp overlap
ChIP HEK293T GSE78099.ZNF257.HEK293T 150 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 156 bp overlap
ChIP K562 ENCFF281INV 200 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 137 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 336 bp overlap
ZNF329 1 dataset
ChIP HEK293 GSE76494.ZNF329.HEK293 303 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 334 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 340 bp overlap
ZNF429 1 dataset
ChIP HEK293T GSE78099.ZNF429.HEK293T 205 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 196 bp overlap
ZNF549 2 datasets
ChIP HEK293 ENCFF528IUI 92 bp overlap
ChIP HEK293 ENCFF565EYY 88 bp overlap
ZNF596 1 dataset
ChIP HEK293 GSE76494.ZNF596.HEK293 164 bp overlap
ZNF610 2 datasets
ChIP HEK293 ENCFF778UKJ 317 bp overlap
ChIP HEK293 ENCSR691TXI.ZNF610.HEK293 656 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 190 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 445 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 341 bp overlap
ZNF85 2 datasets
Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 525 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 373 bp overlap
Zfp809 1 dataset
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap