chr4 : 122,458,421 122,458,991
570 bp 93 TFs 1 linked gene
This 570 bp open chromatin element is linked to IL2 and is bound by 93 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
IL2 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:122,453,421 – 122,463,991
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
AFF4 2 datasets
ChIP CD4_Th1_DMSO GSE62482.AFF4.CD4_Th1_DMSO 156 bp overlap
ChIP CD4_Th1_DMSO GSE62482.AFF4.CD4_Th1_DMSO 109 bp overlap
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 404 bp overlap
ARNT 1 dataset
ChIP RCC10 GSE101063.ARNT.RCC10 280 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 312 bp overlap
ATF7 2 datasets
ChIP K-562 ENCSR972ZBV.ATF7.K-562 247 bp overlap
ChIP K562 ENCFF308SKS 467 bp overlap
Arnt 1 dataset
Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap
BRD2 11 datasets
ChIP K-562 GSE140325.BRD2.K-562 217 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 408 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA_JQ1 474 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 570 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 303 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 303 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 236 bp overlap
ChIP MDA-MB-231_NTsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_NTsiRNA_JQ1 375 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 104 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 495 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 277 bp overlap
BRD4 15 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 559 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 111 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 152 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 208 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 169 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 321 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 321 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 393 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 393 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 570 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 173 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 286 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 481 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 211 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 372 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 424 bp overlap
CDK8 2 datasets
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 247 bp overlap
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 376 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 570 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 560 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.CEBPA.Kasumi-1_SIRUNX1ETO 204 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 286 bp overlap
CLOCK 1 dataset
Motif DE_12h DE_12h-CLOCK_MA0819.3 7 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 273 bp overlap
DAXX 2 datasets
ChIP PC-3 GSE68647.DAXX.PC-3 190 bp overlap
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 137 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 214 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 143 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 177 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 149 bp overlap
FOS 3 datasets
ChIP CD4 GSE116695.FOS.CD4 331 bp overlap
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 570 bp overlap
ChIP MV4-11 GSE64862.FOS.MV4-11 233 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 403 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 313 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 288 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 307 bp overlap
GRHL2 5 datasets
ChIP HBE GSE46194.GRHL2.HBE 201 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 185 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 280 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 144 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 358 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 285 bp overlap
HIF1A 2 datasets
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 225 bp overlap
ChIP RCC10 GSE101063.HIF1A.RCC10 418 bp overlap
HMBOX1 5 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 395 bp overlap
ChIP K562 ENCFF055GAZ 272 bp overlap
ChIP K562 ENCFF055GAZ 288 bp overlap
ChIP K562 ENCFF317JJX 267 bp overlap
ChIP K562 ENCFF317JJX 286 bp overlap
HOXB13 1 dataset
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 144 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 449 bp overlap
ILK 1 dataset
ChIP K-562 ENCSR648INT.ILK.K-562 204 bp overlap
IRF1 8 datasets
ChIP AsPC-1_IFNg GSE141606.IRF1.AsPC-1_IFNg 250 bp overlap
ChIP AsPC-1_ZBED2-cDNA GSE141606.IRF1.AsPC-1_ZBED2-cDNA 320 bp overlap
ChIP HAEC_IL1b_4h GSE89970.IRF1.HAEC_IL1b_4h 229 bp overlap
ChIP K-562 ENCSR854MCV.IRF1.K-562 560 bp overlap
ChIP K-562 ENCSR000EGL.IRF1.K-562 205 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 282 bp overlap
ChIP K562 ENCFF277KTJ 561 bp overlap
ChIP PDAC GSE64557.IRF1.PDAC 275 bp overlap
IRF2 2 datasets
ChIP K-562 ENCSR376WCJ.IRF2.K-562 277 bp overlap
ChIP K562 ENCFF248LJZ 115 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 92 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 294 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 253 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 471 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 295 bp overlap
JUNB 2 datasets
ChIP CD4 GSE116695.JUNB.CD4 242 bp overlap
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 570 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 440 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 267 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 332 bp overlap
L3MBTL2 1 dataset
ChIP K562 ENCFF320EQC 521 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 222 bp overlap
MAF 3 datasets
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 260 bp overlap
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 494 bp overlap
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 408 bp overlap
MAX 7 datasets
Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 135 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 145 bp overlap
ChIP K562 ENCFF110LJS 351 bp overlap
ChIP K562 ENCFF524IJO 128 bp overlap
ChIP NB4 ENCFF966MWB 277 bp overlap
ChIP NB4 ENCSR000EHS.MAX.NB4 113 bp overlap
MAX::MYC 1 dataset
Motif DE_12h DE_12h-MAXMYC_MA0059.2 10 bp overlap
MED1 2 datasets
ChIP CD4_Th1_DMSO GSE62482.MED1.CD4_Th1_DMSO 142 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 216 bp overlap
MEF2A 2 datasets
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 318 bp overlap
ChIP K562 ENCFF903PRO 211 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 225 bp overlap
MEF2C 1 dataset
ChIP GM12878 ENCSR000BNG.MEF2C.GM12878 155 bp overlap
MNT 6 datasets
Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap
ChIP K-562 ENCSR512NLO.MNT.K-562 237 bp overlap
ChIP K-562 ENCSR390VGH.MNT.K-562 337 bp overlap
ChIP K562 ENCFF450LDL 460 bp overlap
ChIP K562 ENCFF820IGH 561 bp overlap
ChIP K562 ENCFF820IGH 355 bp overlap
MXI1 1 dataset
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 116 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 201 bp overlap
MYC 3 datasets
Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap
ChIP GEN2-2 GSE70275.MYC.GEN2-2 128 bp overlap
ChIP U2OS_EtOH GSE77328.MYC.U2OS_EtOH 101 bp overlap
MYCN 2 datasets
Motif DE_12h DE_12h-MYCN_MA0104.5 8 bp overlap
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 82 bp overlap
Mlxip 1 dataset
Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap
NCAPH2 5 datasets
ChIP IMR-90_Triptolide-30min GSE118494.NCAPH2.IMR-90_Triptolide-30min 176 bp overlap
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 370 bp overlap
ChIP IMR-90_alpha-amanitin-1H GSE118494.NCAPH2.IMR-90_alpha-amanitin-1H 331 bp overlap
ChIP IMR-90_alpha-amanitin-30min GSE118494.NCAPH2.IMR-90_alpha-amanitin-30min 288 bp overlap
ChIP IMR-90_ctrl_OIS GSE118494.NCAPH2.IMR-90_ctrl_OIS 236 bp overlap
NFATC2 3 datasets
ChIP CD4 GSE116695.NFATC2.CD4 371 bp overlap
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 391 bp overlap
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 481 bp overlap
NIPBL 2 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 216 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 341 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 187 bp overlap
Npas2 1 dataset
Motif DE_12h DE_12h-Npas2_MA0626.2 8 bp overlap
PRDM1 3 datasets
ChIP A-549 ENCSR977FEF.PRDM1.A-549 164 bp overlap
ChIP A549 ENCFF012KDW 281 bp overlap
ChIP plasmablast GSE142493.PRDM1.plasmablast 146 bp overlap
RAD21 3 datasets
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 210 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 148 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 281 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 213 bp overlap
RBPJ 3 datasets
ChIP K562 ENCFF607OWI 175 bp overlap
ChIP LCL GSE75503.RBPJ.LCL 211 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 158 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 220 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 154 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 184 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 107 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 285 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 304 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 329 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 293 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 429 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 279 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 424 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 484 bp overlap
SMARCA4 7 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 88 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 198 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 536 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 308 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 413 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 187 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 364 bp overlap
SMARCB1 2 datasets
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 295 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 458 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 196 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 301 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 249 bp overlap
STAT3 2 datasets
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 390 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 281 bp overlap
SUZ12 1 dataset
ChIP ProEs GSE59087.SUZ12.ProEs 129 bp overlap
TBX21 2 datasets
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 163 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 242 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 183 bp overlap
TCF7L2 1 dataset
ChIP LNCaP GSE51621.TCF7L2.LNCaP 182 bp overlap
TEAD4 1 dataset
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 317 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 154 bp overlap
TFAP4 4 datasets
ChIP DLD-1 GSE46935.TFAP4.DLD-1 302 bp overlap
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 309 bp overlap
ChIP HepG2 ENCFF932XOY 397 bp overlap
ChIP Kasumi-1 GSE45738.TFAP4.Kasumi-1 420 bp overlap
YY1 1 dataset
ChIP ALL GSE145549.YY1.ALL 226 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 464 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 218 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 410 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 195 bp overlap
ZMYND8 1 dataset
ChIP MDA-MB-231 GSE108833.ZMYND8.MDA-MB-231 132 bp overlap
ZNF148 3 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 238 bp overlap
ChIP K562 ENCFF352SDL 524 bp overlap
ChIP K562 ENCFF352SDL 260 bp overlap
ZNF26 1 dataset
ChIP HEK293T GSE78099.ZNF26.HEK293T 78 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 401 bp overlap
ZNF318 1 dataset
ChIP K562 ENCFF592QGS 371 bp overlap