chr2 : 234,994,455 234,994,904
449 bp 113 TFs 0 linked genes
This 449 bp open chromatin element has no linked target genes and is bound by 113 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:234,989,455 – 234,999,904
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 202 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 54 bp overlap
AR 2 datasets
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 204 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 202 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 241 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 127 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 127 bp overlap
BACH1 3 datasets
ChIP H1 ENCFF282VDB 153 bp overlap
ChIP Hep-G2 ENCSR699TNT.BACH1.Hep-G2 72 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 65 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 449 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 128 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 122 bp overlap
BRD4 12 datasets
ChIP 402-91 GSE111253.BRD4.402-91 294 bp overlap
ChIP COLO-205 GSE73319.BRD4.COLO-205 449 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 109 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 214 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 158 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 80 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 449 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 449 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 149 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 63 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 214 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 58 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 303 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 89 bp overlap
CEBPB 2 datasets
ChIP Ishikawa ENCFF010USJ 261 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 120 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 226 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 239 bp overlap
CSRNP1 1 dataset
ChIP HepG2 ENCFF191UYG 449 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 343 bp overlap
EP300 5 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 184 bp overlap
ChIP HepG2 ENCFF076TMZ 185 bp overlap
ChIP HepG2 ENCFF354ACD 95 bp overlap
ChIP Ishikawa ENCFF364ZWT 266 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 239 bp overlap
ESR1 4 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 278 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 62 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 342 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 71 bp overlap
ESRRA 2 datasets
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 173 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 200 bp overlap
FIP1L1 2 datasets
ChIP Hep-G2 ENCSR313VZG.FIP1L1.Hep-G2 253 bp overlap
ChIP Hep-G2 ENCSR313VZG.FIP1L1.Hep-G2 156 bp overlap
FOXA1 4 datasets
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 224 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 144 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 252 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 104 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 337 bp overlap
GATA3 1 dataset
ChIP thymocyte GSE71751.GATA3.thymocyte 260 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 401 bp overlap
ChIP DE DE-GATA4-2 449 bp overlap
ChIP KATO-III GSE51705.GATA4.KATO-III 182 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 442 bp overlap
ChIP DE DE-GATA6-2 449 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 449 bp overlap
ChIP KATO-III GSE51705.GATA6.KATO-III 230 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 372 bp overlap
ChIP foregut GSE117136.GATA6.foregut 261 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 302 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 294 bp overlap
HNRNPL 2 datasets
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 130 bp overlap
ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 105 bp overlap
HNRNPLL 3 datasets
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 93 bp overlap
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 93 bp overlap
ChIP HepG2 ENCFF952XAB 211 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 299 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 397 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 81 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 97 bp overlap
KDM5A 1 dataset
ChIP HepG2 ENCFF105YGO 449 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 223 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 165 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 153 bp overlap
MAFF 1 dataset
ChIP HepG2 ENCFF452YUT 116 bp overlap
MAFG 2 datasets
ChIP HepG2 ENCFF422NZT 169 bp overlap
ChIP K-562 ENCSR818DQV.MAFG.K-562 256 bp overlap
MAFK 4 datasets
ChIP A549 ENCFF371EPR 58 bp overlap
ChIP H1 ENCFF854XWE 126 bp overlap
ChIP HepG2 ENCFF767LDG 107 bp overlap
ChIP IMR-90 ENCFF336DHZ 83 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 185 bp overlap
ChIP Ishikawa ENCFF064TDQ 379 bp overlap
MED1 4 datasets
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 189 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 417 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 437 bp overlap
ChIP VCaP GSE148358.MED1.VCaP 219 bp overlap
MNX1 2 datasets
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 165 bp overlap
ChIP HepG2 ENCFF938KYA 235 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 268 bp overlap
MTERF4 1 dataset
ChIP HepG2 ENCFF831NAM 95 bp overlap
MYC 2 datasets
ChIP BL41 GSE30726.MYC.BL41 89 bp overlap
ChIP HepG2 ENCFF575FXK 449 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 152 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 146 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 136 bp overlap
NFE2 2 datasets
ChIP HepG2 ENCFF403RMK 58 bp overlap
ChIP K-562 ENCSR552YGL.NFE2.K-562 93 bp overlap
NFE2L2 9 datasets
ChIP A-549 GSE113497.NFE2L2.A-549 449 bp overlap
ChIP A-549 ENCSR584GHV.NFE2L2.A-549 73 bp overlap
ChIP A549 ENCFF474YMB 101 bp overlap
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 428 bp overlap
ChIP HAEC_oxpapc_4h GSE89970.NFE2L2.HAEC_oxpapc_4h 69 bp overlap
ChIP Hep-G2 ENCSR488EES.NFE2L2.Hep-G2 121 bp overlap
ChIP IMR-90 ENCFF059WEE 61 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 173 bp overlap
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 64 bp overlap
NONO 1 dataset
ChIP HepG2 ENCFF361UQH 219 bp overlap
NR0B2 1 dataset
ChIP HepG2 ENCFF071MVY 347 bp overlap
NR2E3 1 dataset
ChIP A549 ENCFF833WDR 126 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 266 bp overlap
NRL 1 dataset
ChIP HepG2 ENCFF528PUT 431 bp overlap
OLIG2 2 datasets
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 292 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 138 bp overlap
PCBP1 1 dataset
ChIP HepG2 ENCFF447SRJ 161 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 114 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 57 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 146 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 144 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 130 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 120 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 81 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 291 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 210 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 77 bp overlap
ChIP HepG2 ENCFF939HTZ 77 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 449 bp overlap
ChIP HepG2 ENCFF561IAJ 421 bp overlap
RBM39 2 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 161 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 161 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 149 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 106 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 449 bp overlap
RXRA 1 dataset
ChIP HepG2 ENCFF763IEA 449 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 284 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 140 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 449 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 309 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 449 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 266 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 449 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 449 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 129 bp overlap
SMARCA4 2 datasets
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 392 bp overlap
SOX13 2 datasets
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 160 bp overlap
ChIP HepG2 ENCFF062VSQ 134 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 417 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 418 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 342 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 187 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 328 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 370 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 86 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 294 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 55 bp overlap
TBX2 1 dataset
ChIP Hep-G2 ENCSR410FEH.TBX2.Hep-G2 106 bp overlap
TBX5 3 datasets
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 146 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 146 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 375 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 333 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 261 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 163 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 346 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 184 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 418 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 136 bp overlap
YY1 2 datasets
ChIP Ishikawa ENCFF505XQX 318 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 166 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 383 bp overlap
ZFHX3 1 dataset
ChIP HepG2 ENCFF082SJV 367 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 154 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 101 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 161 bp overlap
ZNF136 1 dataset
ChIP HepG2 ENCFF188PQX 427 bp overlap
ZNF225 1 dataset
ChIP HepG2 ENCFF500HTT 215 bp overlap
ZNF263 3 datasets
ChIP HEK293 ENCFF336CWQ 353 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 252 bp overlap
ChIP HepG2 ENCFF626SSV 185 bp overlap
ZNF274 2 datasets
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF155SWH 429 bp overlap
ZNF333 1 dataset
ChIP HepG2 ENCFF038JAL 395 bp overlap
ZNF598 1 dataset
ChIP HepG2 ENCFF356UIO 449 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 449 bp overlap
ZNF709 2 datasets
ChIP HepG2 ENCFF151DHM 349 bp overlap
ChIP HepG2 ENCFF151DHM 92 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 252 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 141 bp overlap