chr2 : 174,343,626 174,344,136
510 bp 113 TFs 2 linked genes
This 510 bp open chromatin element is linked to ENSG00000280414 and SP9 and is bound by 113 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000280414 6.1 kb Proximal Proximity
SP9 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:174,338,626 – 174,349,136
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 253 bp overlap
AGO1 1 dataset
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 206 bp overlap
AGO2 3 datasets
ChIP HepG2 ENCFF252VFI 510 bp overlap
ChIP HepG2 ENCFF252VFI 413 bp overlap
ChIP HepG2 ENCFF773YDL 510 bp overlap
AR 4 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 224 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 419 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 102 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 446 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 204 bp overlap
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 257 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 496 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 510 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 278 bp overlap
BCOR 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 476 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 510 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 510 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 510 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 142 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 202 bp overlap
BRD4 8 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 206 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 209 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 102 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 404 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 63 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 127 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 389 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 308 bp overlap
CBX2 2 datasets
ChIP HepG2 ENCFF838BNI 148 bp overlap
ChIP K-562 ENCSR000ATU.CBX2.K-562 164 bp overlap
CBX7 2 datasets
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 510 bp overlap
ChIP lymphocyte_UNC4976 GSE110139.CBX7.lymphocyte_UNC4976 125 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 316 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 218 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 148 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 407 bp overlap
ChIP H1 ENCFF329MAX 168 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 496 bp overlap
CTCF 4 datasets
ChIP HCT-116 GSE131606.CTCF.HCT-116 210 bp overlap
ChIP coronary-artery ENCSR175FLL.CTCF.coronary-artery 223 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 103 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 314 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 258 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 266 bp overlap
ChIP BLaER1 ENCFF274GAT 238 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 510 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 226 bp overlap
ESR1 5 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 257 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 143 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 488 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 347 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 231 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 245 bp overlap
EZH2 27 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 231 bp overlap
ChIP B cell ENCFF803EMO 425 bp overlap
ChIP DOHH2 ENCFF528GDC 286 bp overlap
ChIP GM23338 ENCFF613YON 510 bp overlap
ChIP GM23338 ENCFF886DXX 271 bp overlap
ChIP GM23338 ENCFF886DXX 119 bp overlap
ChIP H1 ENCFF232NZA 510 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 510 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 510 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 510 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 510 bp overlap
ChIP astrocyte ENCFF365JTP 510 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 510 bp overlap
ChIP fibroblast of lung ENCFF479BAW 95 bp overlap
ChIP fibroblast of lung ENCFF479BAW 363 bp overlap
ChIP hESC GSE113817.EZH2.hESC 306 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 310 bp overlap
ChIP hepatocyte ENCFF118DKH 280 bp overlap
ChIP hepatocyte ENCFF552DZB 510 bp overlap
ChIP keratinocyte ENCFF070STK 129 bp overlap
ChIP keratinocyte ENCFF070STK 438 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 246 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 510 bp overlap
ChIP neural cell ENCFF610EPB 230 bp overlap
ChIP neural progenitor cell ENCFF018MKA 510 bp overlap
ChIP neural progenitor cell ENCFF472NFV 510 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 510 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 457 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 447 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 168 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 52 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 241 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 235 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 233 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 510 bp overlap
GTF2F1 1 dataset
ChIP K-562 GSE120104.GTF2F1.K-562 227 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 138 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 414 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 259 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 365 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 291 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 277 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 218 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 356 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 52 bp overlap
INO80 3 datasets
ChIP Hep-G2 GSE97411.INO80.Hep-G2 321 bp overlap
ChIP Hep-G2 GSE107730.INO80.Hep-G2 363 bp overlap
ChIP Huh-7 GSE97411.INO80.Huh-7 389 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 510 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 510 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 510 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 510 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 117 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 423 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 510 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 398 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 510 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 271 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 242 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 460 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 426 bp overlap
KLF4 1 dataset
ChIP MCF-7 GSE41561.KLF4.MCF-7 196 bp overlap
KMT2A 2 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 151 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 270 bp overlap
MAF 1 dataset
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 163 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 318 bp overlap
MTF2 1 dataset
ChIP HepG2 ENCFF916FZN 507 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 70 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 308 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 287 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 262 bp overlap
NFKB2 1 dataset
ChIP HepG2 ENCFF165NTY 510 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 477 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 355 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 320 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 388 bp overlap
PCBP1 2 datasets
ChIP K-562 ENCSR052PTN.PCBP1.K-562 322 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 322 bp overlap
PCGF2 1 dataset
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 88 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 326 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 205 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 191 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 510 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 510 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 391 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 462 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 478 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 221 bp overlap
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 208 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 330 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 472 bp overlap
ChIP H1 ENCFF905HFL 273 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 282 bp overlap
RBM14 1 dataset
ChIP K-562 ENCSR423FCW.RBM14.K-562 209 bp overlap
RBM39 3 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 190 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 190 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 58 bp overlap
RELA 1 dataset
ChIP HEK293_60_min GSE89017.RELA.HEK293_60_min 314 bp overlap
RNF2 5 datasets
ChIP H1 ENCFF239FFS 433 bp overlap
ChIP H1 ENCFF239FFS 510 bp overlap
ChIP H1 ENCFF239FFS 237 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 63 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 72 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 489 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 499 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 510 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 265 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 168 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 139 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 510 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 378 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 308 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 290 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 458 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 347 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 331 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 74 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 266 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 347 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 151 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 237 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 428 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 397 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 259 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 393 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 352 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 264 bp overlap
SUZ12 9 datasets
ChIP GM12878 ENCFF498QAM 371 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 510 bp overlap
ChIP H1 ENCFF507HGF 229 bp overlap
ChIP H1 ENCFF881NFR 510 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 510 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 510 bp overlap
ChIP NT2/D1 ENCFF574SXS 510 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 510 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 207 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 213 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 230 bp overlap
TARDBP 2 datasets
ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 209 bp overlap
ChIP Hep-G2 GSE120104.TARDBP.Hep-G2 192 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 100 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 148 bp overlap
TCF7 1 dataset
ChIP breast-organoid GSE113909.TCF7.breast-organoid 337 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 78 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 436 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 383 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 191 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 345 bp overlap
USF2 1 dataset
ChIP K-562 GSE111469.USF2.K-562 172 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 416 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 461 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 510 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 322 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 510 bp overlap
ZNF704 1 dataset
ChIP HepG2 ENCFF408LBU 510 bp overlap