chr19 : 28,400,435 28,401,608
1,173 bp 123 TFs 0 linked genes
This 1.2 kb open chromatin element has no linked target genes and is bound by 123 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:28,395,435 – 28,406,608
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
123 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 218 bp overlap
BACH2 1 dataset
Motif DE_60h DE_60h-BACH2_MA1470.2 19 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 155 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 188 bp overlap
BCL6B 1 dataset
ChIP HEK293 ENCFF555YRB 365 bp overlap
BRD4 6 datasets
ChIP DND41_E GSE54379.BRD4.DND41_E 312 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 201 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 52 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 301 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 316 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 404 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 237 bp overlap
CREB1 1 dataset
Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap
CTCF 4 datasets
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap
ChIP OCI-LY1 ENCFF455ESK 451 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 321 bp overlap
CTCFL 2 datasets
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 254 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCFL.Kelly_resistant_JQ1 225 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 282 bp overlap
EOMES 2 datasets
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 491 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 583 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 303 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 672 bp overlap
FOXA1 1 dataset
Motif DE_60h DE_60h-FOXA1_MA0148.5 8 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 867 bp overlap
ChIP DE DE-FOXA2-2 657 bp overlap
Motif DE_60h DE_60h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_60h DE_60h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
FOXE1 1 dataset
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
FOXI1 1 dataset
Motif DE_60h DE_60h-FOXI1_MA0042.2 7 bp overlap
FOXP1 1 dataset
Motif DE_60h DE_60h-FOXP1_MA0481.4 7 bp overlap
FOXP4 1 dataset
Motif DE_60h DE_60h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_60h DE_60h-FOXS1_MA2118.1 8 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 137 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 137 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 314 bp overlap
GATA3 4 datasets
ChIP BE2C GSE65664.GATA3.BE2C 172 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 308 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 438 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 435 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 697 bp overlap
ChIP DE DE-GATA4-2 913 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 262 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 796 bp overlap
ChIP DE DE-GATA6-2 1000 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 915 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 883 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 763 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 899 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1075 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 924 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 727 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 301 bp overlap
GLI2 2 datasets
ChIP HEK293 ENCFF700EUN 305 bp overlap
ChIP HEK293 ENCSR978EQY.GLI2.HEK293 260 bp overlap
GLIS1 3 datasets
ChIP HEK293 ENCFF299RSE 366 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 279 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 568 bp overlap
GRHL2 1 dataset
Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 497 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 543 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 441 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 326 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 565 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 105 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 242 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 154 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 579 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 349 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 279 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 180 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 416 bp overlap
KLF8 3 datasets
ChIP HEK293 ENCFF929IAJ 457 bp overlap
ChIP HEK293 ENCFF929IAJ 447 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 427 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 307 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 543 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NEUROD1 6 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 733 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 468 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 605 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 378 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 262 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 228 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 613 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 705 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 543 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 521 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 386 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 205 bp overlap
PHIP 2 datasets
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 511 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 399 bp overlap
PHOX2A 1 dataset
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 599 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 385 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 248 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 472 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 501 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 336 bp overlap
RORB 1 dataset
Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap
SCRT1 3 datasets
Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap
ChIP HEK293 ENCFF513YVP 239 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 480 bp overlap
SCRT2 3 datasets
Motif DE_60h DE_60h-SCRT2_MA0744.3 10 bp overlap
ChIP HEK293 ENCFF711QQB 438 bp overlap
ChIP HEK293 ENCFF711QQB 483 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 733 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 712 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 699 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 539 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S10-DE-d1-BAF155-exp1 370 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 350 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 301 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 582 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 203 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 185 bp overlap
TBR1 1 dataset
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
TBX18 1 dataset
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
ChIP Kelly GSE94822.TBX2.Kelly 549 bp overlap
TBX20 1 dataset
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TBX3 1 dataset
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 372 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 507 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 362 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 362 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF265CEM 645 bp overlap
ChIP HEK293 ENCFF582MWI 671 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 483 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 525 bp overlap
TSHZ1 2 datasets
ChIP HEK293 ENCFF893BGV 115 bp overlap
ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 617 bp overlap
Tbx6 1 dataset
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 192 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 543 bp overlap
YY1 1 dataset
ChIP HEK293 ENCFF734SBY 391 bp overlap
ZBTB1 3 datasets
ChIP HEK293 ENCFF916DEM 321 bp overlap
ChIP HEK293 ENCFF916DEM 321 bp overlap
ChIP HEK293 ENCSR927UJQ.ZBTB1.HEK293 554 bp overlap
ZBTB20 3 datasets
ChIP HEK293 ENCFF524ADK 617 bp overlap
ChIP HEK293 ENCFF524ADK 555 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 245 bp overlap
ZBTB21 2 datasets
ChIP HEK293 ENCFF509WYZ 421 bp overlap
ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 378 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 144 bp overlap
ZBTB44 3 datasets
ChIP HEK293 ENCFF560VPN 163 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 161 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 515 bp overlap
ZBTB7A 2 datasets
ChIP HEK293 ENCFF420MRZ 351 bp overlap
ChIP HEK293 ENCSR773REP.ZBTB7A.HEK293 246 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 571 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 369 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 261 bp overlap
ZEB2 3 datasets
ChIP HEK293 ENCFF847JIE 551 bp overlap
ChIP HEK293 ENCFF847JIE 519 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 407 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 455 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 224 bp overlap
ZIC1 1 dataset
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 185 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 263 bp overlap
ZNF184 2 datasets
ChIP HEK293 ENCFF221CII 357 bp overlap
ChIP HEK293 ENCSR020UPN.ZNF184.HEK293 281 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 249 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 433 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 343 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 355 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 187 bp overlap
ZNF324 2 datasets
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
ChIP HEK293 GSE76494.ZNF324.HEK293 191 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 425 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 407 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 521 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 456 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 172 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 366 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 551 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 350 bp overlap
ZNF391 2 datasets
ChIP HEK293 ENCFF835SNY 381 bp overlap
ChIP HEK293 ENCSR210MET.ZNF391.HEK293 440 bp overlap
ZNF423 2 datasets
ChIP HEK293 ENCFF937QHI 357 bp overlap
ChIP HEK293 ENCFF937QHI 357 bp overlap
ZNF449 1 dataset
ChIP HEK293 ENCFF764ZIC 411 bp overlap
ZNF501 3 datasets
ChIP HEK293 ENCFF066RAQ 505 bp overlap
ChIP HEK293 ENCFF066RAQ 409 bp overlap
ChIP HEK293 ENCSR461ZJT.ZNF501.HEK293 703 bp overlap
ZNF547 1 dataset
Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap
ZNF558 2 datasets
ChIP HEK293 ENCFF994JWH 417 bp overlap
ChIP HEK293 ENCSR447ZTA.ZNF558.HEK293 251 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 348 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 321 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 275 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 501 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 387 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 677 bp overlap
ZNF639 2 datasets
ChIP HEK293 ENCFF971ZNH 417 bp overlap
ChIP HEK293 ENCSR080CST.ZNF639.HEK293 338 bp overlap
ZNF701 1 dataset
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
ZNF76 2 datasets
ChIP HEK293 ENCFF374TCG 451 bp overlap
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 210 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 207 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 407 bp overlap
ZSCAN23 2 datasets
ChIP HEK293 ENCFF127TFV 93 bp overlap
ChIP HEK293 ENCSR705ASR.ZSCAN23.HEK293 431 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 337 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 171 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 116 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 427 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 525 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 297 bp overlap
Zic2 1 dataset
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap