chr13 : 71,306,905 71,307,502
597 bp 174 TFs 0 linked genes
This 597 bp open chromatin element has no linked target genes and is bound by 174 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:71,301,905 – 71,312,502
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
174 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
BARX2 1 dataset
Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 272 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 444 bp overlap
CTCF 3 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 178 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 211 bp overlap
CUX2 1 dataset
Motif DE_12h DE_12h-CUX2_MA0755.2 9 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF680YXW 239 bp overlap
DRGX 1 dataset
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
DUXA 1 dataset
Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap
EMX1 1 dataset
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
EOMES 2 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 236 bp overlap
ESRRA 3 datasets
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
ESRRB 3 datasets
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
EVX1 1 dataset
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
Esrrg 1 dataset
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOSL2 1 dataset
ChIP NPC GSE122631.FOSL2.NPC 199 bp overlap
FOXA1 1 dataset
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
FOXA2 1 dataset
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXD1 1 dataset
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxn1 1 dataset
Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 291 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GSX1 1 dataset
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HNF1A 1 dataset
Motif DE_12h DE_12h-HNF1A_MA0046.3 13 bp overlap
HNF1B 1 dataset
Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap
HNF4A 3 datasets
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
HNF4G 3 datasets
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
HOXA1 1 dataset
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXA2 1 dataset
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
HOXB2 1 dataset
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXB5 1 dataset
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXC8 1 dataset
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
HOXD11 2 datasets
Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap
Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
ISX 1 dataset
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 337 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 278 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 388 bp overlap
JUNB 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 123 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Lhx4 1 dataset
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MIXL1 1 dataset
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 597 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 597 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 597 bp overlap
NKX6-2 1 dataset
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
NR5A1 2 datasets
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
NR6A1 1 dataset
Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 218 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Nr2e1 2 datasets
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
Nr5A2 2 datasets
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
ONECUT1 2 datasets
Motif DE_12h DE_12h-ONECUT1_MA0679.3 9 bp overlap
ChIP H9 ERP004206.ONECUT1.H9 200 bp overlap
PDX1 1 dataset
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 163 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 360 bp overlap
POU6F1 2 datasets
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
PPARG 1 dataset
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
PRRX1 1 dataset
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RAX2 1 dataset
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
SHOX 1 dataset
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 326 bp overlap
SMARCA4 4 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 597 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 597 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 597 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 526 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 416 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 243 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX12 1 dataset
Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap
SOX14 2 datasets
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX18 2 datasets
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 590 bp overlap
ChIP NPC GSE122631.SOX2.NPC 597 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 563 bp overlap
SOX21 2 datasets
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 597 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SOX8 2 datasets
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SOX9 2 datasets
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
Shox2 1 dataset
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox5 2 datasets
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox6 2 datasets
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 181 bp overlap
TBP 1 dataset
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TEAD1 2 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD2 2 datasets
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
TEAD3 2 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 2 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
TLX2 1 dataset
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
UNCX 1 dataset
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
VAX2 1 dataset
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZFP69B 1 dataset
ChIP HEK293T GSE78099.ZFP69B.HEK293T 121 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 141 bp overlap
ZNF184 2 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF24 2 datasets
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF35 2 datasets
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
ChIP HEK293 GSE76494.ZNF35.HEK293 55 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF75A 2 datasets
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
ZNF778 1 dataset
ChIP HEK293T GSE78099.ZNF778.HEK293T 112 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
mix-a 1 dataset
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap