chr12 : 95,239,283 95,239,939
656 bp 133 TFs 0 linked genes
This 656 bp open chromatin element has no linked target genes and is bound by 133 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:95,234,283 – 95,244,939
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
133 transcription factors
Source
Cell type
ARID3A 2 datasets
ChIP Hep-G2 ENCSR000EDP.ARID3A.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF341DES 462 bp overlap
Arid5a 1 dataset
Motif DE_72h DE_72h-Arid5a_MA0602.2 8 bp overlap
Atoh1 1 dataset
Motif DE_72h DE_72h-Atoh1_MA1467.3 7 bp overlap
BRD4 1 dataset
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 80 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 119 bp overlap
CDX2 2 datasets
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 152 bp overlap
Motif DE_72h DE_72h-CDX2_MA0465.3 8 bp overlap
CEBPB 2 datasets
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 79 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 69 bp overlap
CTCFL 1 dataset
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 108 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 251 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DPRX 1 dataset
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 162 bp overlap
EOMES 1 dataset
Motif DE_72h DE_72h-EOMES_MA0800.2 9 bp overlap
ESR1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 187 bp overlap
FIGLA 1 dataset
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA1 4 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 215 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 137 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 231 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 251 bp overlap
FOXA2 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 263 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 256 bp overlap
ChIP DE DE-FOXA2-1 447 bp overlap
ChIP DE DE-FOXA2-2 439 bp overlap
ChIP HepG2 ENCFF533COJ 219 bp overlap
ChIP HepG2 ENCFF894AYY 118 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 271 bp overlap
FOXB1 1 dataset
Motif DE_72h DE_72h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_72h DE_72h-FOXC1_MA0032.2 11 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 140 bp overlap
GATA1 8 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 65 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 304 bp overlap
ChIP K-562 ENCSR000EWM.GATA1.K-562 203 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 245 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 242 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 176 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 221 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 345 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000EWG.GATA2.K-562 127 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 197 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 291 bp overlap
GATA3 5 datasets
ChIP MCF-7 GSE133072.GATA3.MCF-7 236 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 306 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 200 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 216 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 297 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 276 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 199 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 211 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 528 bp overlap
ChIP DE DE-GATA4-2 607 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 248 bp overlap
ChIP foregut GSE117136.GATA4.foregut 445 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 434 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 394 bp overlap
GATA6 7 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 206 bp overlap
ChIP DE DE-GATA6-1 496 bp overlap
ChIP DE DE-GATA6-2 628 bp overlap
ChIP foregut GSE117136.GATA6.foregut 398 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 366 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 293 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 372 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HAND2 2 datasets
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 74 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 50 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 348 bp overlap
ChIP K562 ENCFF055GAZ 461 bp overlap
ChIP K562 ENCFF317JJX 456 bp overlap
HNF4A 3 datasets
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 157 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 131 bp overlap
ChIP liver ENCFF354NRH 349 bp overlap
HOXB13 1 dataset
Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap
Hmga1 1 dataset
Motif DE_72h DE_72h-Hmga1_MA2124.1 8 bp overlap
Hoxa13 1 dataset
Motif DE_72h DE_72h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_72h DE_72h-Hoxd13_MA0909.4 7 bp overlap
ISL2 1 dataset
Motif DE_72h DE_72h-ISL2_MA0914.2 6 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 190 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 150 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 113 bp overlap
MAF 1 dataset
ChIP monocyte_INFg GSE98367.MAF.monocyte_INFg 78 bp overlap
MAFF 1 dataset
Motif DE_72h DE_72h-MAFF_MA0495.4 11 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_72h DE_72h-MGA_MA0801.1 8 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 123 bp overlap
NR1I2 1 dataset
Motif DE_72h DE_72h-NR1I2_MA1533.2 15 bp overlap
NR2C2 1 dataset
Motif DE_72h DE_72h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif DE_72h DE_72h-NR2F1_MA1537.2 13 bp overlap
Nfat5 1 dataset
Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap
Nr2f6 1 dataset
Motif DE_72h DE_72h-Nr2f6_MA0677.2 13 bp overlap
OSR1 1 dataset
Motif DE_72h DE_72h-OSR1_MA1542.2 8 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_72h DE_72h-OTX2_MA0712.3 7 bp overlap
PDX1 5 datasets
ChIP hESC GSE58685.PDX1.hESC 241 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 350 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 319 bp overlap
ChIP islet ERP001456.PDX1.islet 117 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 407 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PKNOX1 1 dataset
Motif DE_72h DE_72h-PKNOX1_MA0782.3 10 bp overlap
PKNOX2 1 dataset
Motif DE_72h DE_72h-PKNOX2_MA0783.1 12 bp overlap
PLAG1 1 dataset
Motif DE_72h DE_72h-PLAG1_MA0163.1 14 bp overlap
POU4F2 1 dataset
Motif DE_72h DE_72h-POU4F2_MA0683.2 15 bp overlap
PPARD 1 dataset
Motif DE_72h DE_72h-PPARD_MA1550.2 14 bp overlap
PPARG 2 datasets
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 289 bp overlap
ChIP HepG2 ENCFF329FBJ 355 bp overlap
PRDM6 2 datasets
ChIP HEK293 GSE76494.PRDM6.HEK293 156 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 162 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_72h DE_72h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_72h DE_72h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm4 1 dataset
Motif DE_72h DE_72h-Prdm4_MA1647.3 11 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
RELB 1 dataset
ChIP L1236 GSE63736.RELB.L1236 133 bp overlap
REST 1 dataset
ChIP K-562 ENCSR137ZMQ.REST.K-562 230 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 348 bp overlap
Rxra 1 dataset
Motif DE_72h DE_72h-Rxra_MA0512.2 14 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCFF513YVP 94 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 337 bp overlap
SNAI2 1 dataset
Motif DE_72h DE_72h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 310 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 320 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 265 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 337 bp overlap
SPIC 1 dataset
Motif DE_72h DE_72h-SPIC_MA0687.2 13 bp overlap
STAT3 5 datasets
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 70 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 62 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 66 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 67 bp overlap
ChIP monocyte_resting GSE120943.STAT3.monocyte_resting 54 bp overlap
SUZ12 1 dataset
ChIP ProEs GSE59087.SUZ12.ProEs 125 bp overlap
TAL1 1 dataset
ChIP CD34 GSE52924.TAL1.CD34 255 bp overlap
TBR1 1 dataset
Motif DE_72h DE_72h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_72h DE_72h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_72h DE_72h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_72h DE_72h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_72h DE_72h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_72h DE_72h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_72h DE_72h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_72h DE_72h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_72h DE_72h-TBX5_MA0807.1 8 bp overlap
TEAD1 2 datasets
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 213 bp overlap
TEAD3 2 datasets
Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap
ChIP HepG2 ENCFF054UUL 371 bp overlap
TEAD4 4 datasets
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
ChIP Hep-G2 ENCSR000BRP.TEAD4.Hep-G2 176 bp overlap
ChIP HepG2 ENCFF006QNB 334 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 275 bp overlap
TGIF1 1 dataset
Motif DE_72h DE_72h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_72h DE_72h-TGIF2_MA0797.1 12 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 179 bp overlap
TWIST1 1 dataset
Motif DE_72h DE_72h-TWIST1_MA1123.3 8 bp overlap
Tbx6 2 datasets
Motif DE_72h DE_72h-Tbx6_MA1567.3 9 bp overlap
Motif DE_72h DE_72h-Tbx6_MA1567.3 9 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 631 bp overlap
ChIP HEK293 ENCFF865LIO 288 bp overlap
ZBTB18 2 datasets
Motif DE_72h DE_72h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_72h DE_72h-ZBTB18_MA0698.2 11 bp overlap
ZBTB6 2 datasets
Motif DE_72h DE_72h-ZBTB6_MA1581.2 9 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 191 bp overlap
ZEB1 1 dataset
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif DE_72h DE_72h-ZFP14_MA1972.1 15 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 161 bp overlap
ZIM3 1 dataset
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ZKSCAN1 5 datasets
Motif DE_72h DE_72h-ZKSCAN1_MA1585.2 9 bp overlap
ChIP Hep-G2 ENCSR157CAU.ZKSCAN1.Hep-G2 240 bp overlap
ChIP HepG2 ENCFF578KDY 242 bp overlap
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 208 bp overlap
ChIP MCF-7 ENCFF247MBY 62 bp overlap
ZNF135 1 dataset
Motif DE_72h DE_72h-ZNF135_MA1587.1 14 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 216 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCFF066NGR 441 bp overlap
ZNF211 1 dataset
Motif DE_72h DE_72h-ZNF211_MA1974.2 10 bp overlap
ZNF24 2 datasets
Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap
ChIP K562 ENCFF877JCX 218 bp overlap
ZNF319 2 datasets
ChIP K-562 ENCSR231PDA.ZNF319.K-562 87 bp overlap
ChIP K562 ENCFF561ZSB 132 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 140 bp overlap
ZNF354A 1 dataset
Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 148 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 140 bp overlap
ZNF512 3 datasets
ChIP HepG2 ENCFF113IGR 100 bp overlap
ChIP K562 ENCFF455WDH 154 bp overlap
ChIP K562 ENCFF601EMZ 268 bp overlap
ZNF530 1 dataset
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 105 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 118 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 73 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 285 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 238 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
ZNF708 1 dataset
Motif DE_72h DE_72h-ZNF708_MA1730.2 9 bp overlap
ZNF75D 1 dataset
Motif DE_72h DE_72h-ZNF75D_MA1601.2 12 bp overlap
Zfp809 1 dataset
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap