chr11 : 120,057,897 120,058,380
483 bp 90 TFs 3 linked genes
This 483 bp open chromatin element is linked to OAF, TLCD5, and ARHGEF12 and is bound by 90 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
OAF 152.9 kb Distal Multiome
TLCD5 267.1 kb Distal Multiome
ARHGEF12 278.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:120,052,897 – 120,063,380
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 86 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 358 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 483 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 483 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 292 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 268 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 148 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 357 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 483 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 130 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 246 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 189 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 163 bp overlap
BRD4 7 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 152 bp overlap
ChIP HCC1806_DMSO_24h GSE87418.BRD4.HCC1806_DMSO_24h 60 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 483 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 268 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 394 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 189 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 420 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 84 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 126 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 121 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 483 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 411 bp overlap
CTCF 7 datasets
ChIP HAP1 GSE152721.CTCF.HAP1 233 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 329 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 367 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 253 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 285 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 178 bp overlap
ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 186 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 109 bp overlap
E2F1 1 dataset
ChIP HMEC-1 GSE62425.E2F1.HMEC-1 114 bp overlap
E2F6 4 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP H1 ENCFF785DWK 267 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 83 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 170 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 157 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 106 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 368 bp overlap
EZH2 5 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 59 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 365 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 130 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 323 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 483 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 343 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 268 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 218 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 483 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 145 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 172 bp overlap
JUN 7 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 113 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 483 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 461 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 483 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 121 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 69 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 205 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 143 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 483 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 239 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 267 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 213 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 56 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 110 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 357 bp overlap
MAZ 2 datasets
ChIP HEK293 GSE76494.MAZ.HEK293 53 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 266 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 345 bp overlap
MYCN 1 dataset
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 114 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 483 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 124 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 310 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 456 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 251 bp overlap
ChIP hESC GSE18292.NANOG.hESC 106 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 102 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 362 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 233 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 303 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 421 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 242 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 330 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 136 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 318 bp overlap
ChIP H1 ENCFF566JSR 405 bp overlap
ChIP H1 ENCFF833NJP 257 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 372 bp overlap
POU5F1 12 datasets
ChIP BG03 GSE21614.POU5F1.BG03 99 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 483 bp overlap
ChIP GM23338 ENCFF333SNB 297 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 483 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 483 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 243 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 275 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 208 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 483 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 481 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 277 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 392 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 155 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 483 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 231 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 483 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 316 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 163 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 95 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 126 bp overlap
RFX5 1 dataset
ChIP H1 ENCFF605EGG 64 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 207 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 150 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 90 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 328 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 191 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 345 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 215 bp overlap
SMARCA4 4 datasets
ChIP NSC GSE125033.SMARCA4.NSC 292 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 215 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 483 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 393 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 288 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 322 bp overlap
SMARCC1 3 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 65 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 304 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 483 bp overlap
SMC3 2 datasets
ChIP GP5D GSE51234.SMC3.GP5D 216 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 367 bp overlap
SOX2 6 datasets
ChIP H9 GSE46837.SOX2.H9 156 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 252 bp overlap
ChIP hESC GSE69479.SOX2.hESC 200 bp overlap
ChIP hESC GSE18292.SOX2.hESC 130 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 323 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 263 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 320 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 251 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 261 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 87 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 225 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 377 bp overlap
ChIP H1 ENCFF478SZO 164 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 205 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 291 bp overlap
TBP 6 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 216 bp overlap
ChIP hESC GSE122298.TBP.hESC 329 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 216 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 242 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 182 bp overlap
ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 250 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 335 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 178 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 162 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 479 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 233 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 120 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 205 bp overlap
YY1 1 dataset
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 97 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 88 bp overlap
ZBTB43 2 datasets
ChIP WTC11 ENCFF058JUB 371 bp overlap
ChIP WTC11 ENCFF058JUB 382 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 326 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 241 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 483 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 163 bp overlap