chr11 : 18,409,064 18,409,351
287 bp 115 TFs 1 linked gene
This 287 bp open chromatin element is linked to LDHC and is bound by 115 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LDHC 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:18,404,064 – 18,414,351
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
115 transcription factors
Source
Cell type
AFF4 3 datasets
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 148 bp overlap
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 97 bp overlap
ChIP HeLa_EGF GSE40632.AFF4.HeLa_EGF 182 bp overlap
AGO1 9 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 182 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 182 bp overlap
ChIP HepG2 ENCFF277EOU 121 bp overlap
ChIP HepG2 ENCFF277EOU 287 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 92 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 90 bp overlap
ChIP K562 ENCFF025NLP 287 bp overlap
ChIP K562 ENCFF025NLP 240 bp overlap
ChIP K562 ENCFF741BCI 287 bp overlap
AGO2 3 datasets
ChIP HepG2 ENCFF252VFI 287 bp overlap
ChIP HepG2 ENCFF252VFI 287 bp overlap
ChIP HepG2 ENCFF773YDL 287 bp overlap
AKAP8 2 datasets
ChIP HepG2 ENCFF478OVI 89 bp overlap
ChIP HepG2 ENCFF478OVI 287 bp overlap
ARID2 3 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 221 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 287 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 119 bp overlap
ARNT2 1 dataset
ChIP HepG2 ENCFF940DGN 72 bp overlap
ARNTL 1 dataset
ChIP Hep-G2 ENCSR794LVK.ARNTL.Hep-G2 148 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 228 bp overlap
BCL3 2 datasets
ChIP A-549 ENCSR000BQH.BCL3.A-549 175 bp overlap
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 84 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 191 bp overlap
BRD4 11 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 174 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 178 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 138 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 89 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 89 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 126 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 126 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 57 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 191 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 222 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 156 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 175 bp overlap
CHAF1B 1 dataset
ChIP MOLM-13 GSE120063.CHAF1B.MOLM-13 64 bp overlap
CREB5 1 dataset
ChIP K-562 ENCSR935PEA.CREB5.K-562 143 bp overlap
CSNK2A1 1 dataset
ChIP LNCaP_DHT GSE58607.CSNK2A1.LNCaP_DHT 166 bp overlap
CTCF 1 dataset
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 129 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 170 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 129 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 102 bp overlap
ELF1 1 dataset
ChIP A-549 ENCSR000BPT.ELF1.A-549 60 bp overlap
ETS1 1 dataset
ChIP 786-O GSE86092.ETS1.786-O 110 bp overlap
ETV4 1 dataset
ChIP HepG2 ENCFF534CDD 50 bp overlap
EVI1 1 dataset
ChIP SKH1_10d GSE87283.EVI1.SKH1_10d 108 bp overlap
FOSB 1 dataset
ChIP A-549 ENCSR918GHT.FOSB.A-549 170 bp overlap
FOSL2 2 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 165 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 160 bp overlap
FOXO3 1 dataset
ChIP Hep-G2 GSE97661.FOXO3.Hep-G2 106 bp overlap
GTF3A 1 dataset
ChIP HepG2 ENCFF268DGX 85 bp overlap
HMGXB4 3 datasets
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 201 bp overlap
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 235 bp overlap
ChIP HepG2 ENCFF032DND 134 bp overlap
HOXA7 2 datasets
ChIP A-549 ENCSR402OYZ.HOXA7.A-549 210 bp overlap
ChIP A549 ENCFF746ZBJ 287 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 134 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 104 bp overlap
ILF3 2 datasets
ChIP K-562 ENCSR632TJQ.ILF3.K-562 147 bp overlap
ChIP K-562 GSE103215.ILF3.K-562 115 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 231 bp overlap
JRK 1 dataset
ChIP HepG2 ENCFF350YLO 75 bp overlap
JUN 2 datasets
ChIP A549 ENCFF191QZG 252 bp overlap
ChIP A549 ENCFF846DUV 244 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR525VAT.JUNB.K-562 51 bp overlap
JUND 4 datasets
ChIP A-549 ENCSR000BRF.JUND.A-549 93 bp overlap
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 94 bp overlap
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 117 bp overlap
ChIP SK-N-SH ENCFF551NEQ 258 bp overlap
KDM3A 2 datasets
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 184 bp overlap
ChIP HepG2 ENCFF077DXQ 118 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 222 bp overlap
KMT2A 2 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 121 bp overlap
ChIP L826 GSE83671.KMT2A.L826 69 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 142 bp overlap
MAF 2 datasets
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 76 bp overlap
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 103 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 196 bp overlap
MAX 1 dataset
ChIP A-549 ENCSR000BTJ.MAX.A-549 83 bp overlap
MBD4 1 dataset
ChIP Hep-G2 ENCSR000BQW.MBD4.Hep-G2 97 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 159 bp overlap
MTA1 1 dataset
ChIP HepG2 ENCFF038CCB 93 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 117 bp overlap
MYBL2 2 datasets
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 246 bp overlap
ChIP MCF-10A_ctrl GSE115787.MYBL2.MCF-10A_ctrl 192 bp overlap
MYNN 2 datasets
ChIP K-562 ENCSR737LTZ.MYNN.K-562 100 bp overlap
ChIP K562 ENCFF399UNK 168 bp overlap
NCAPH2 4 datasets
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 74 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 287 bp overlap
ChIP IMR-90_alpha-amanitin-1H GSE118494.NCAPH2.IMR-90_alpha-amanitin-1H 54 bp overlap
ChIP IMR-90_ctrl_OIS GSE118494.NCAPH2.IMR-90_ctrl_OIS 173 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 196 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 97 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 287 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 128 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 176 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 114 bp overlap
NR3C1 5 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 86 bp overlap
ChIP BEAS-2B_TNF-DEX_IA1 GSE125623.NR3C1.BEAS-2B_TNF-DEX_IA1 287 bp overlap
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 287 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 287 bp overlap
ChIP BEAS-2B_shNR3C1_Veh_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_Veh_IA1 287 bp overlap
PATZ1 1 dataset
ChIP K-562 ENCSR549PVK.PATZ1.K-562 227 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 287 bp overlap
PBX3 3 datasets
ChIP A-549 ENCSR000BTN.PBX3.A-549 62 bp overlap
ChIP A549 ENCFF277EQG 166 bp overlap
ChIP A549 ENCFF277EQG 233 bp overlap
POLR2A 22 datasets
ChIP GM12878 ENCFF263VRI 187 bp overlap
ChIP GM12878 ENCFF899QYP 139 bp overlap
ChIP GM12892 ENCFF245LYF 255 bp overlap
ChIP GM19193 ENCFF599VTO 57 bp overlap
ChIP GM19193 ENCFF599VTO 278 bp overlap
ChIP HCT116 ENCFF508RDJ 231 bp overlap
ChIP HeLa-S3 ENCFF224LWS 97 bp overlap
ChIP HeLa-S3 ENCFF224LWS 287 bp overlap
ChIP HeLa-S3 ENCFF773DNG 84 bp overlap
ChIP HepG2 ENCFF252NAR 287 bp overlap
ChIP HepG2 ENCFF736SLT 207 bp overlap
ChIP IMR-90 ENCFF672YWV 118 bp overlap
ChIP K562 ENCFF215CWW 278 bp overlap
ChIP MCF-7 ENCFF164XWP 166 bp overlap
ChIP Panc1 ENCFF290KAB 231 bp overlap
ChIP Panc1 ENCFF290KAB 228 bp overlap
ChIP SK-N-MC ENCFF088IVG 249 bp overlap
ChIP SK-N-SH ENCFF683PFH 261 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 129 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 279 bp overlap
ChIP sigmoid colon ENCFF748YVT 190 bp overlap
ChIP stomach ENCFF820WZN 125 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 287 bp overlap
ChIP HepG2 ENCFF508UTS 287 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 287 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 168 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 156 bp overlap
ChIP HepG2 ENCFF939HTZ 148 bp overlap
RBM22 4 datasets
ChIP HepG2 ENCFF292RVQ 66 bp overlap
ChIP HepG2 ENCFF561IAJ 66 bp overlap
ChIP K562 ENCFF420JDS 282 bp overlap
ChIP K562 ENCFF629OUL 264 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 202 bp overlap
REST 2 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 60 bp overlap
ChIP A549 ENCFF148AIS 230 bp overlap
RPA2_phospho 3 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 175 bp overlap
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 243 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 159 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 94 bp overlap
SFPQ 1 dataset
ChIP HepG2 ENCFF145CDF 216 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 71 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 130 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 171 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_PBS GSE134556.SMAD2-3.HUVEC-C_PBS 168 bp overlap
SMAD3 3 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 287 bp overlap
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 224 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 210 bp overlap
SMAD7 2 datasets
ChIP HepG2 ENCFF850FXR 144 bp overlap
ChIP HepG2 ENCFF850FXR 287 bp overlap
SP1 1 dataset
ChIP HCT116 ENCFF800LBN 147 bp overlap
SPEN 1 dataset
ChIP HepG2 ENCFF939VPY 53 bp overlap
SRSF4 4 datasets
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 98 bp overlap
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 95 bp overlap
ChIP HepG2 ENCFF593CLP 204 bp overlap
ChIP HepG2 ENCFF958PYB 220 bp overlap
SSRP1 1 dataset
ChIP hiF-T GSE98758.SSRP1.hiF-T 287 bp overlap
SUPT5H 16 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 287 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 107 bp overlap
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 102 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 287 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 86 bp overlap
ChIP HCT-116_Nut3 GSE138548.SUPT5H.HCT-116_Nut3 221 bp overlap
ChIP HCT-116_Nut3_pThr806 GSE138548.SUPT5H.HCT-116_Nut3_pThr806 110 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 154 bp overlap
ChIP HEK293_PNUTSW401A GSE134198.SUPT5H.HEK293_PNUTSW401A 221 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 263 bp overlap
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 180 bp overlap
ChIP U2OS_DMSO GSE115365.SUPT5H.U2OS_DMSO 246 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 287 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 213 bp overlap
ChIP U2OS_siMYC_High GSE115365.SUPT5H.U2OS_siMYC_High 54 bp overlap
ChIP U2OS_siMYC_ON GSE115365.SUPT5H.U2OS_siMYC_ON 188 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 77 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 98 bp overlap
TFCP2L1 1 dataset
ChIP A549 ENCFF393VBT 272 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 74 bp overlap
TP63 1 dataset
ChIP A549 ENCFF399JYQ 278 bp overlap
YY1 1 dataset
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 205 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCSR207PFI.ZBED1.GM12878 94 bp overlap
ZBTB33 3 datasets
ChIP A-549 ENCSR000BPZ.ZBTB33.A-549 73 bp overlap
ChIP SK-N-SH ENCFF667JYU 128 bp overlap
ChIP SK-N-SH ENCFF667JYU 287 bp overlap
ZBTB34 1 dataset
ChIP HepG2 ENCFF161MIO 287 bp overlap
ZC3H13 1 dataset
ChIP HepG2 ENCFF444JZJ 95 bp overlap
ZFP36L1 1 dataset
ChIP HepG2 ENCFF375BAZ 68 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 93 bp overlap
ZGPAT 1 dataset
ChIP HepG2 ENCFF055YSO 173 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 231 bp overlap
ZMYM3 1 dataset
ChIP Hep-G2_AC_R259-2-2C3 GSE97661.ZMYM3.Hep-G2_AC_R259-2-2C3 93 bp overlap
ZMYND11 1 dataset
ChIP DU145_ETS1KO GSE86238.ZMYND11.DU145_ETS1KO 203 bp overlap
ZNF221 1 dataset
ChIP HepG2 ENCFF374BUN 259 bp overlap
ZNF280B 1 dataset
ChIP K562 ENCFF568RSS 83 bp overlap
ZNF318 1 dataset
ChIP HepG2 ENCFF054INI 90 bp overlap
ZNF501 2 datasets
ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 218 bp overlap
ChIP HepG2 ENCFF879XZR 100 bp overlap
ZNF564 1 dataset
ChIP HepG2 ENCFF364ZIM 287 bp overlap
ZNF607 1 dataset
ChIP HepG2 ENCFF118ANP 266 bp overlap
ZNF691 1 dataset
ChIP HepG2 ENCFF427OHT 53 bp overlap
ZNF747 1 dataset
ChIP HepG2 ENCFF528MQU 142 bp overlap