chr9 : 19,374,591 19,374,888
297 bp 118 TFs 2 linked genes
This 297 bp open chromatin element is linked to ENSG00000273226 and RPS6 and is bound by 118 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000273226 562 bp At TSS Proximity
RPS6 5.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:19,369,591 – 19,379,888
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
118 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 162 bp overlap
AGO1 1 dataset
ChIP K562 ENCFF025NLP 250 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 233 bp overlap
ChIP HepG2 ENCFF773YDL 227 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 297 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 166 bp overlap
ATF2 4 datasets
ChIP GM12878 ENCFF521LQJ 240 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 117 bp overlap
ChIP H1 ENCFF295GZO 215 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 297 bp overlap
BACH1 2 datasets
ChIP GM12878 ENCFF576UEQ 297 bp overlap
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 284 bp overlap
BCL3 3 datasets
ChIP A-549 ENCSR000BQH.BCL3.A-549 79 bp overlap
ChIP A549 ENCFF214WKT 297 bp overlap
ChIP A549 ENCFF214WKT 153 bp overlap
BCLAF1 2 datasets
ChIP GM12878 ENCFF306JRM 185 bp overlap
ChIP K-562 ENCSR492LTS.BCLAF1.K-562 147 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 243 bp overlap
BRD4 6 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 124 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 297 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 244 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 116 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 116 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 68 bp overlap
CBFB 2 datasets
ChIP GM12878 ENCFF056JUS 297 bp overlap
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 178 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 79 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 181 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 199 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 297 bp overlap
ChIP H1 ENCFF126NLU 173 bp overlap
CREB1 3 datasets
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 58 bp overlap
ChIP Hep-G2 ENCSR000BVL.CREB1.Hep-G2 129 bp overlap
ChIP K-562 ENCSR000BSO.CREB1.K-562 94 bp overlap
CSNK2A1 1 dataset
ChIP LNCaP_DHT GSE58607.CSNK2A1.LNCaP_DHT 297 bp overlap
CTCF 3 datasets
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 174 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 97 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 148 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 127 bp overlap
DDX5 1 dataset
ChIP BT-549 GSE112961.DDX5.BT-549 210 bp overlap
DPF2 1 dataset
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 71 bp overlap
E2F1 1 dataset
ChIP HeLa GSE22478.E2F1.HeLa 139 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 172 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 257 bp overlap
ELF4 2 datasets
ChIP HEK293T ENCSR778QLY.ELF4.HEK293T 297 bp overlap
ChIP K-562 ENCSR638QHV.ELF4.K-562 283 bp overlap
ELL2 1 dataset
ChIP HeLa GSE40632.ELL2.HeLa 68 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 297 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 187 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 160 bp overlap
ETS1 2 datasets
ChIP HEY-A8 GSE101832.ETS1.HEY-A8 297 bp overlap
ChIP OVCAR-8 GSE101832.ETS1.OVCAR-8 231 bp overlap
EWSR1 1 dataset
ChIP K-562 ENCSR142YYA.EWSR1.K-562 129 bp overlap
FIP1L1 1 dataset
ChIP Hep-G2 GSE120104.FIP1L1.Hep-G2 117 bp overlap
FOSB 1 dataset
ChIP A-549 ENCSR918GHT.FOSB.A-549 280 bp overlap
FOSL2 2 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 145 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 120 bp overlap
FOXK2 2 datasets
ChIP HEK293T ENCFF745GCJ 90 bp overlap
ChIP HEK293T ENCFF745GCJ 297 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 53 bp overlap
FOXO3 1 dataset
ChIP Hep-G2 GSE97661.FOXO3.Hep-G2 143 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 186 bp overlap
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 155 bp overlap
HNRNPL 1 dataset
ChIP HepG2 ENCFF671UYF 205 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 270 bp overlap
ILF3 1 dataset
ChIP K-562 ENCSR632TJQ.ILF3.K-562 297 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE107730.INO80.Hep-G2 224 bp overlap
ChIP Huh-7 GSE97411.INO80.Huh-7 286 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 219 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 234 bp overlap
JUN 3 datasets
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 253 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 151 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 203 bp overlap
JUND 4 datasets
ChIP A-549 ENCSR000BRF.JUND.A-549 144 bp overlap
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 212 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 139 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 278 bp overlap
KDM5B 2 datasets
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 163 bp overlap
ChIP K-562 ENCSR000AQA.KDM5B.K-562 118 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 133 bp overlap
LEF1 1 dataset
ChIP HEK293T ENCFF869LPS 275 bp overlap
MBD4 2 datasets
ChIP Hep-G2 ENCSR000BQW.MBD4.Hep-G2 138 bp overlap
ChIP HepG2 ENCFF785HSD 286 bp overlap
MEF2D 1 dataset
ChIP SK-UT-1 GSE132622.MEF2D.SK-UT-1 50 bp overlap
MEN1 1 dataset
ChIP HCT-116_B1 GSE152144.MEN1.HCT-116_B1 292 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 252 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-HUSH-KO GSE95451.MORC2.HeLa_V5-HUSH-KO 193 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 297 bp overlap
MYBL2 2 datasets
ChIP MCF-10A_DOX GSE115787.MYBL2.MCF-10A_DOX 297 bp overlap
ChIP MCF-10A_ctrl GSE115787.MYBL2.MCF-10A_ctrl 289 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 218 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 193 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 297 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 297 bp overlap
ChIP IMR-90_alpha-amanitin-30min GSE118494.NCAPH2.IMR-90_alpha-amanitin-30min 267 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR910JAI.NCOR1.K-562 255 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 111 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 297 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 191 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 152 bp overlap
ChIP Hep-G2 ENCSR000BQX.NFIC.Hep-G2 123 bp overlap
NOTCH1 1 dataset
ChIP pulmonary-artery_endothelial-cell_siPFKFB3 GSE89786.NOTCH1.pulmonary-artery_endothelial-cell_siPFKFB3 141 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 297 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 297 bp overlap
PAF1 1 dataset
ChIP HepG2 ENCFF949UAN 277 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 91 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 180 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 297 bp overlap
POLR2A 50 datasets
ChIP GM10847 ENCFF241PBX 297 bp overlap
ChIP GM12878 ENCFF263VRI 248 bp overlap
ChIP GM12878 ENCFF412KAE 297 bp overlap
ChIP GM12878 ENCFF521FXC 238 bp overlap
ChIP GM12878 ENCFF631ERR 224 bp overlap
ChIP GM12891 ENCFF012SUT 208 bp overlap
ChIP GM12891 ENCFF127ICP 297 bp overlap
ChIP GM12891 ENCFF379FCI 135 bp overlap
ChIP GM12891 ENCFF379FCI 181 bp overlap
ChIP GM12891 ENCFF379FCI 154 bp overlap
ChIP GM12892 ENCFF245LYF 248 bp overlap
ChIP GM12892 ENCFF245LYF 268 bp overlap
ChIP GM12892 ENCFF506PGQ 297 bp overlap
ChIP GM12892 ENCFF542ZFO 297 bp overlap
ChIP GM12892 ENCFF542ZFO 111 bp overlap
ChIP GM15510 ENCFF880HVJ 297 bp overlap
ChIP GM18505 ENCFF311CYB 279 bp overlap
ChIP GM18526 ENCFF599EPS 271 bp overlap
ChIP GM18951 ENCFF079KKO 297 bp overlap
ChIP GM19099 ENCFF726IBN 265 bp overlap
ChIP GM19099 ENCFF726IBN 57 bp overlap
ChIP GM19193 ENCFF599VTO 290 bp overlap
ChIP H1 ENCFF566JSR 297 bp overlap
ChIP H1 ENCFF833NJP 297 bp overlap
ChIP HCT116 ENCFF508RDJ 157 bp overlap
ChIP HL-60 ENCFF321XKE 272 bp overlap
ChIP HL-60 ENCFF321XKE 297 bp overlap
ChIP HeLa-S3 ENCFF045HUU 297 bp overlap
ChIP HeLa-S3 ENCFF224LWS 297 bp overlap
ChIP HeLa-S3 ENCFF224LWS 167 bp overlap
ChIP HeLa-S3 ENCFF773DNG 297 bp overlap
ChIP HepG2 ENCFF350RIU 297 bp overlap
ChIP HepG2 ENCFF350RIU 217 bp overlap
ChIP HepG2 ENCFF718XAJ 262 bp overlap
ChIP HepG2 ENCFF736SLT 297 bp overlap
ChIP K562 ENCFF137JSF 295 bp overlap
ChIP K562 ENCFF214YGX 297 bp overlap
ChIP K562 ENCFF215CWW 297 bp overlap
ChIP K562 ENCFF262YXJ 297 bp overlap
ChIP K562 ENCFF514URW 253 bp overlap
ChIP MCF-7 ENCFF164XWP 93 bp overlap
ChIP MCF-7 ENCFF164XWP 297 bp overlap
ChIP PFSK-1 ENCFF576NIT 152 bp overlap
ChIP Raji ENCFF613VGX 284 bp overlap
ChIP Raji ENCFF613VGX 280 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 297 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 209 bp overlap
ChIP right lobe of liver ENCFF026NCK 221 bp overlap
ChIP spleen ENCFF044PYR 257 bp overlap
ChIP spleen ENCFF446ZGT 246 bp overlap
POLR2G 4 datasets
ChIP HepG2 ENCFF241AEG 297 bp overlap
ChIP HepG2 ENCFF508UTS 297 bp overlap
ChIP K562 ENCFF047BLG 255 bp overlap
ChIP K562 ENCFF648YPL 255 bp overlap
POU2F2 2 datasets
ChIP GM12891 ENCFF166YPP 277 bp overlap
ChIP GM12891 ENCSR000BII.POU2F2.GM12891 261 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 297 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 297 bp overlap
PTBP1 1 dataset
ChIP K-562 GSE120104.PTBP1.K-562 173 bp overlap
RBFOX2 5 datasets
ChIP HepG2 ENCFF554DMZ 63 bp overlap
ChIP HepG2 ENCFF554DMZ 133 bp overlap
ChIP HepG2 ENCFF939HTZ 132 bp overlap
ChIP K562 ENCFF196WTG 263 bp overlap
ChIP K562 ENCFF967GRF 263 bp overlap
RBM22 4 datasets
ChIP HepG2 ENCFF292RVQ 297 bp overlap
ChIP HepG2 ENCFF561IAJ 297 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 138 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 138 bp overlap
RELA 1 dataset
ChIP U2OS_10Gy_2h_recovery GSE109996.RELA.U2OS_10Gy_2h_recovery 294 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 297 bp overlap
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 297 bp overlap
RUNX1 3 datasets
ChIP MV4-11 GSE79899.RUNX1.MV4-11 146 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 78 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 151 bp overlap
RUVBL2 1 dataset
ChIP Huh-7 GSE97411.RUVBL2.Huh-7 291 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 231 bp overlap
SIRT6 1 dataset
ChIP K-562 ENCSR000AUB.SIRT6.K-562 297 bp overlap
SMAD3 2 datasets
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 140 bp overlap
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 73 bp overlap
SMAD5 3 datasets
ChIP GM12878 ENCSR251OVJ.SMAD5.GM12878 297 bp overlap
ChIP K-562 ENCSR000FCD.SMAD5.K-562 297 bp overlap
ChIP K562 ENCFF941FJJ 297 bp overlap
SMARCC1 1 dataset
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 221 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 69 bp overlap
SOX13 1 dataset
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 140 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 165 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 160 bp overlap
SRSF4 4 datasets
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 233 bp overlap
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 160 bp overlap
ChIP HepG2 ENCFF593CLP 231 bp overlap
ChIP HepG2 ENCFF958PYB 235 bp overlap
SSRP1 2 datasets
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 297 bp overlap
ChIP hiF-T GSE98758.SSRP1.hiF-T 241 bp overlap
SUPT5H 10 datasets
ChIP HCT-116_DMSO_pSer666 GSE138548.SUPT5H.HCT-116_DMSO_pSer666 297 bp overlap
ChIP HCT-116_Nut3 GSE138548.SUPT5H.HCT-116_Nut3 171 bp overlap
ChIP HCT-116_Nut3_pThr806 GSE138548.SUPT5H.HCT-116_Nut3_pThr806 172 bp overlap
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 207 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 161 bp overlap
ChIP K562 ENCFF902PAW 297 bp overlap
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 297 bp overlap
ChIP U2OS_DMSO GSE115365.SUPT5H.U2OS_DMSO 297 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 297 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 145 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 106 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 221 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 238 bp overlap
TSC22D4 1 dataset
ChIP GM12878 GSE97661.TSC22D4.GM12878 297 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 129 bp overlap
YY1 3 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 181 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 279 bp overlap
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 62 bp overlap
ZBED1 2 datasets
ChIP GM12878 ENCSR207PFI.ZBED1.GM12878 172 bp overlap
ChIP K-562 ENCSR286PCG.ZBED1.K-562 143 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 117 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 251 bp overlap
ZC3H4 1 dataset
ChIP HepG2 ENCFF603QUY 265 bp overlap
ZEB1 1 dataset
ChIP RKO GSE88734.ZEB1.RKO 253 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 176 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 297 bp overlap
ZNF384 3 datasets
ChIP HEK293T ENCFF019DZX 90 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 297 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 152 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 200 bp overlap