chr7 : 55,569,764 55,570,111
347 bp 91 TFs 2 linked genes
This 347 bp open chromatin element is linked to VOPP1 and VOPP1-DT and is bound by 91 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
VOPP1 1.8 kb Proximal Proximity
VOPP1-DT 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:55,564,764 – 55,575,111
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
AHR 2 datasets
ChIP GM01310_3MC GSE116632.AHR.GM01310_3MC 72 bp overlap
ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 132 bp overlap
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 269 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 188 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 100 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 79 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 347 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 163 bp overlap
BCL6 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 328 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 347 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 53 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 317 bp overlap
BHLHE40 4 datasets
ChIP GM12878 ENCFF010ZUU 331 bp overlap
ChIP GM12878 ENCFF521IZR 206 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 347 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 319 bp overlap
BRD3 1 dataset
ChIP MM1-S GSE43743.BRD3.MM1-S 236 bp overlap
BRD4 12 datasets
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 347 bp overlap
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 347 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 347 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 347 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 347 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 253 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 347 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 293 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 308 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 274 bp overlap
ChIP Mutu-1_JQ1 GSE84213.BRD4.Mutu-1_JQ1 206 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 121 bp overlap
CD74 1 dataset
ChIP CLL_p4 GSE88955.CD74.CLL_p4 219 bp overlap
CDK8 1 dataset
ChIP MM1-S GSE43743.CDK8.MM1-S 67 bp overlap
CDK9 3 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 347 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 215 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 246 bp overlap
CHD1 2 datasets
ChIP GM12878 ENCFF566UBH 347 bp overlap
ChIP GM12878 ENCFF566UBH 198 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 224 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 205 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 340 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 347 bp overlap
CUX1 1 dataset
ChIP GM12878 ENCFF064TOM 342 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 182 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 306 bp overlap
ChIP GM12878 ENCFF813OXE 265 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCFF692SMY 258 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF242HCG 347 bp overlap
ESR1 4 datasets
ChIP T-47D-A_E2 GSE80358.ESR1.T-47D-A_E2 207 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 232 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 138 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 347 bp overlap
FOXA1 13 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 115 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 144 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 65 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 71 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 105 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 58 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 82 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 89 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 132 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 66 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 76 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 183 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 78 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 93 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 284 bp overlap
ChIP DE DE-GATA4-2 285 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 69 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 196 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 146 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 129 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 153 bp overlap
HOXB13 4 datasets
ChIP LNCaP GSE96652.HOXB13.LNCaP 51 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 156 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 210 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 290 bp overlap
HSF1 2 datasets
ChIP GM12878 ENCFF845UGP 258 bp overlap
ChIP GM12878 ENCSR009MBP.HSF1.GM12878 166 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF824TGK 347 bp overlap
ChIP GM12878 ENCFF824TGK 93 bp overlap
IRF4 2 datasets
ChIP B-cell GSE142493.IRF4.B-cell 347 bp overlap
ChIP U266 GSE142493.IRF4.U266 156 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 308 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 284 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 303 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 294 bp overlap
MAX 9 datasets
ChIP NCI-H128 GSE41105.MAX.NCI-H128 330 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 347 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 341 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 347 bp overlap
ChIP P493-6 GSE42262.MAX.P493-6 347 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 268 bp overlap
ChIP P493-6_4HR GSE125863.MAX.P493-6_4HR 332 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 347 bp overlap
ChIP P493-6_CMYC_24H GSE36354.MAX.P493-6_CMYC_24H 346 bp overlap
MED1 7 datasets
ChIP GM12878 GSE93080.MED1.GM12878 347 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 319 bp overlap
ChIP MM1-S_DMSO GSE36354.MED1.MM1-S_DMSO 190 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 280 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 287 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 287 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 278 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 333 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 254 bp overlap
MXI1 1 dataset
ChIP GM12878 ENCFF666NJR 347 bp overlap
MYB 1 dataset
ChIP GM12878 ENCFF904SON 280 bp overlap
MYC 11 datasets
ChIP BL41 GSE30726.MYC.BL41 173 bp overlap
ChIP CUTLL1 GSE90716.MYC.CUTLL1 256 bp overlap
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 149 bp overlap
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 347 bp overlap
ChIP NCI-H128 GSE41105.MYC.NCI-H128 329 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 306 bp overlap
ChIP P493-6 GSE77061.MYC.P493-6 316 bp overlap
ChIP P493-6_CMYC_24H GSE36354.MYC.P493-6_CMYC_24H 249 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 184 bp overlap
ChIP P493-6_SHCTR GSE60223.MYC.P493-6_SHCTR 303 bp overlap
ChIP Raji GSE30726.MYC.Raji 306 bp overlap
MYCN 6 datasets
ChIP BE2C GSE80151.MYCN.BE2C 220 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 231 bp overlap
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 347 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 347 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 167 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 220 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 347 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 337 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 182 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCFF259FWL 133 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 223 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 235 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 241 bp overlap
NKRF 1 dataset
ChIP GM12878 ENCFF392NLB 291 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 246 bp overlap
NRF1 3 datasets
ChIP GM12878 ENCFF969FRH 210 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 116 bp overlap
ChIP Namalwa GSE53133.NRF1.Namalwa 248 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 152 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 310 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 279 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 317 bp overlap
POLR2A 15 datasets
ChIP GM12878 ENCFF263VRI 157 bp overlap
ChIP GM12878 ENCFF412KAE 347 bp overlap
ChIP GM12891 ENCFF012SUT 316 bp overlap
ChIP GM12891 ENCFF127ICP 306 bp overlap
ChIP GM12891 ENCFF379FCI 305 bp overlap
ChIP GM12892 ENCFF245LYF 276 bp overlap
ChIP GM12892 ENCFF245LYF 347 bp overlap
ChIP GM12892 ENCFF506PGQ 244 bp overlap
ChIP GM15510 ENCFF880HVJ 306 bp overlap
ChIP GM18505 ENCFF311CYB 242 bp overlap
ChIP GM18526 ENCFF599EPS 245 bp overlap
ChIP GM18951 ENCFF079KKO 152 bp overlap
ChIP GM19099 ENCFF726IBN 112 bp overlap
ChIP GM19193 ENCFF599VTO 336 bp overlap
ChIP GM19193 ENCFF599VTO 320 bp overlap
POU2F1 3 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 95 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 54 bp overlap
ChIP T-47D GSE148277.POU2F1.T-47D 141 bp overlap
POU2F2 1 dataset
ChIP GM12891 ENCFF166YPP 270 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 51 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 124 bp overlap
RAD51 2 datasets
ChIP GM12878 ENCFF916JXQ 160 bp overlap
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 347 bp overlap
RELA 3 datasets
ChIP GM12878 ENCSR000EAG.RELA.GM12878 313 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 245 bp overlap
ChIP GM19099 ENCSR000EBI.RELA.GM19099 337 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 347 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 347 bp overlap
REST 1 dataset
ChIP GM12878 ENCSR000BQS.REST.GM12878 130 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 241 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 297 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 162 bp overlap
SKIL 3 datasets
ChIP GM12878 ENCFF171OVM 183 bp overlap
ChIP GM12878 ENCFF171OVM 138 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 347 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 181 bp overlap
SOX2 2 datasets
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 234 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 299 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 151 bp overlap
STAT3 5 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 206 bp overlap
ChIP OCI-Ly3 GSE50723.STAT3.OCI-Ly3 130 bp overlap
ChIP SU-DHL-2 GSE50723.STAT3.SU-DHL-2 329 bp overlap
ChIP Th1_IL-6_HyIL6 GSE130810.STAT3.Th1_IL-6_HyIL6 176 bp overlap
ChIP Th1_IL-6_Mut3 GSE130810.STAT3.Th1_IL-6_Mut3 195 bp overlap
TAF1 2 datasets
ChIP GM12878 ENCSR000BGS.TAF1.GM12878 309 bp overlap
ChIP GM12891 ENCFF254YPA 337 bp overlap
TBP 3 datasets
ChIP GM12878 ENCFF571OXR 347 bp overlap
ChIP GM12878 ENCFF571OXR 173 bp overlap
ChIP GM12878 ENCSR000DZZ.TBP.GM12878 279 bp overlap
TBX21 4 datasets
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 266 bp overlap
ChIP GM12878 ENCFF951HUW 303 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 347 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 347 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 154 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 96 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 253 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 188 bp overlap
TRIM22 3 datasets
ChIP GM12878 ENCFF919OMX 116 bp overlap
ChIP GM12878 ENCSR637QAM.TRIM22.GM12878 347 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 347 bp overlap
USF2 3 datasets
ChIP GM12878 ENCFF078SJX 277 bp overlap
ChIP GM12878 GSE97661.USF2.GM12878 325 bp overlap
ChIP GM12878 ENCSR000DZU.USF2.GM12878 123 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 214 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 263 bp overlap