chr6 : 104,958,059 – 104,958,190
131 bp 89 TFs 1 linked gene
This 131 bp open chromatin element is linked to LIN28B and is bound by 89 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LIN28B 953 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:104,953,059 – 104,963,190
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
AFF1 3 datasets
ChIP K-562 ENCSR426URK.AFF1.K-562 70 bp overlap
ChIP K-562 ENCSR241LIH.AFF1.K-562 65 bp overlap
ChIP K562 ENCFF583EEH 131 bp overlap
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 80 bp overlap
ASH2L 1 dataset
ChIP HepG2 ENCFF207QHL 131 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 77 bp overlap
BACH1 1 dataset
ChIP K562 ENCFF419VIM 131 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 87 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 131 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 131 bp overlap
BRD2 6 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 131 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 131 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD2.K-562_iBET-BD1-IFNG 131 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD2.K-562_iBET-BD2-IFNG 131 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 131 bp overlap
ChIP NCI-H23 GSE113714.BRD2.NCI-H23 70 bp overlap
BRD3 5 datasets
ChIP H-1_DE GSE126661.BRD3.H-1_DE 131 bp overlap
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 131 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 131 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 131 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 131 bp overlap
BRD4 7 datasets
ChIP DND41 GSE54379.BRD4.DND41 108 bp overlap
ChIP HEK293T GSE51633.BRD4.HEK293T 58 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 131 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 131 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 131 bp overlap
ChIP K562 ENCFF092PWQ 131 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 63 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF128BID 131 bp overlap
ChIP H1 ENCFF998XEK 131 bp overlap
CREB3L1 1 dataset
ChIP K562 ENCFF701TVD 80 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 131 bp overlap
E2F1 2 datasets
ChIP K562 ENCFF163BSY 131 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 131 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 131 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF454SBL 131 bp overlap
EZH2 8 datasets
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 131 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 131 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 131 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 131 bp overlap
ChIP fibroblast of lung ENCFF479BAW 131 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 131 bp overlap
ChIP hepatocyte ENCFF118DKH 131 bp overlap
ChIP hepatocyte ENCFF118DKH 73 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF015GDS 131 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 74 bp overlap
ChIP K562 ENCFF928TKZ 131 bp overlap
ChIP K562 ENCFF968WBH 131 bp overlap
HDAC3 1 dataset
ChIP K562 ENCFF713GIR 76 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 124 bp overlap
HMGXB4 1 dataset
ChIP HepG2 ENCFF032DND 131 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 131 bp overlap
ChIP K562 ENCFF348IBL 131 bp overlap
ChIP K562 ENCFF771OHZ 125 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 126 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 131 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 128 bp overlap
KDM5B 1 dataset
ChIP K-562 ENCSR000AQA.KDM5B.K-562 109 bp overlap
KMT2A 6 datasets
ChIP HEK293T_C-term GSE90762.KMT2A.HEK293T_C-term 131 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 131 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 129 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 91 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 131 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 77 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 131 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 75 bp overlap
MAX 1 dataset
ChIP K562 ENCFF524IJO 55 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 59 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 105 bp overlap
ChIP K562 ENCFF809XHP 74 bp overlap
MNT 3 datasets
ChIP K-562 ENCSR390VGH.MNT.K-562 131 bp overlap
ChIP K562 ENCFF342DNS 67 bp overlap
ChIP K562 ENCFF820IGH 108 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 131 bp overlap
ChIP neural cell ENCFF623HQN 131 bp overlap
MYC 2 datasets
ChIP K-562 ENCSR000EGJ.MYC.K-562 128 bp overlap
ChIP K-562 ENCSR000EZU.MYC.K-562 131 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 106 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 107 bp overlap
MYNN 1 dataset
ChIP K562 ENCFF399UNK 73 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF057YFW 131 bp overlap
NR2F1 1 dataset
ChIP K562 ENCFF221HJH 74 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF689EWI 131 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 105 bp overlap
PHF8 4 datasets
ChIP H1 ENCFF427UFV 131 bp overlap
ChIP H1 ENCFF427UFV 131 bp overlap
ChIP K-562 ENCSR000AQH.PHF8.K-562 131 bp overlap
ChIP K562 ENCFF217UCA 131 bp overlap
POLR2A 8 datasets
ChIP GM23338 ENCFF450WCS 131 bp overlap
ChIP H1 ENCFF566JSR 131 bp overlap
ChIP H1 ENCFF770YBQ 131 bp overlap
ChIP H1 ENCFF770YBQ 130 bp overlap
ChIP H1 ENCFF833NJP 73 bp overlap
ChIP HepG2 ENCFF350RIU 131 bp overlap
ChIP K562 ENCFF215CWW 131 bp overlap
ChIP K562 ENCFF262YXJ 131 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 131 bp overlap
ChIP K562 ENCFF648YPL 131 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 131 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 131 bp overlap
PRDM10 3 datasets
ChIP HEK293 ENCFF145WQQ 131 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 76 bp overlap
ChIP K562 ENCFF740YLK 131 bp overlap
PRPF4 1 dataset
ChIP HepG2 ENCFF645WCL 118 bp overlap
RAD21 3 datasets
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 131 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 131 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 131 bp overlap
RBBP5 1 dataset
ChIP K-562 ENCSR000AQI.RBBP5.K-562 131 bp overlap
RBFOX2 2 datasets
ChIP K562 ENCFF196WTG 131 bp overlap
ChIP K562 ENCFF967GRF 131 bp overlap
REST 4 datasets
ChIP K562 ENCFF430APM 131 bp overlap
ChIP Panc1 ENCFF518EEQ 131 bp overlap
ChIP Panc1 ENCFF518EEQ 131 bp overlap
ChIP neural ENCSR000BTV.REST.neural 66 bp overlap
RUVBL2 2 datasets
ChIP U2OS GSE130602.RUVBL2.U2OS 131 bp overlap
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 105 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF896IJG 118 bp overlap
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 120 bp overlap
SMARCC1 1 dataset
ChIP ESC S25-ESC-d0-BAF155-exp1 131 bp overlap
SMARCC2 1 dataset
ChIP K562 ENCFF368GSR 131 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 63 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 63 bp overlap
SP4 1 dataset
ChIP H1 ENCFF473YOB 131 bp overlap
TAF1 6 datasets
ChIP A-549 ENCSR000BPF.TAF1.A-549 131 bp overlap
ChIP H1 ENCFF478SZO 131 bp overlap
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 95 bp overlap
ChIP K-562 ENCSR000BKS.TAF1.K-562 131 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 131 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 131 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 131 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 96 bp overlap
TAF9B 1 dataset
ChIP K562 ENCFF121ZIF 131 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 60 bp overlap
TBP 3 datasets
ChIP K562 ENCFF901UYM 55 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 131 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 93 bp overlap
TOE1 1 dataset
ChIP K562 ENCFF728FRA 110 bp overlap
USF2 1 dataset
ChIP K562 ENCFF306QPU 113 bp overlap
YY1 3 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 131 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 108 bp overlap
ChIP K562 ENCFF660QRE 131 bp overlap
ZBTB11 1 dataset
ChIP HEK293 ENCFF262GZJ 129 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 131 bp overlap
ChIP HEK293 ENCFF865LIO 125 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 131 bp overlap
ZBTB26 2 datasets
ChIP HEK293 ENCFF752POA 131 bp overlap
ChIP HEK293 ENCFF752TCU 131 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 122 bp overlap
ChIP HEK293 ENCFF303WRD 131 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 92 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 131 bp overlap
ZNF148 2 datasets
ChIP K-562 GSE121133.ZNF148.K-562 56 bp overlap
ChIP K562 ENCFF352SDL 59 bp overlap
ZNF175 1 dataset
ChIP K562 ENCFF497AEJ 131 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 91 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 101 bp overlap
ZNF213 1 dataset
ChIP HEK293 ENCSR295GRB.ZNF213.HEK293 66 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 131 bp overlap
ZNF281 2 datasets
ChIP K-562 GSE121133.ZNF281.K-562 128 bp overlap
ChIP K562 ENCFF594VNM 108 bp overlap
ZNF318 1 dataset
ChIP K562 ENCFF592QGS 131 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 131 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 131 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 122 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 109 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 116 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 111 bp overlap
ZNF384 4 datasets
ChIP HEK293T ENCFF019DZX 131 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 57 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 87 bp overlap
ChIP K562 ENCFF365NXQ 94 bp overlap
ZNF394 1 dataset
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 116 bp overlap
ZNF430 1 dataset
ChIP HepG2 ENCFF967HQR 131 bp overlap
ZNF592 1 dataset
ChIP K562 ENCFF547OSS 102 bp overlap
ZNF652 1 dataset
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 107 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 89 bp overlap
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