chr4 : 40,751,010 40,751,221
211 bp 101 TFs 1 linked gene
This 211 bp open chromatin element is linked to NSUN7 and is bound by 101 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NSUN7 1.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:40,746,010 – 40,756,221
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
101 transcription factors
Source
Cell type
AR 3 datasets
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 77 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 211 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 211 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 211 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 211 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 211 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 87 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 188 bp overlap
BMI1 1 dataset
ChIP K-562 ENCSR782WRO.BMI1.K-562 109 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 211 bp overlap
BRD4 3 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 211 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 155 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 50 bp overlap
Bcl11B 2 datasets
Motif DE_24h DE_24h-Bcl11B_MA1989.2 9 bp overlap
Motif ES_0h ES_0h-Bcl11B_MA1989.2 9 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 75 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 109 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 57 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 152 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 211 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 211 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 110 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 211 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 187 bp overlap
CTCF 1 dataset
ChIP GP5D GSE51234.CTCF.GP5D 207 bp overlap
E2F1 2 datasets
ChIP MCF-7 ENCFF692OYJ 211 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 211 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 211 bp overlap
ChIP H1 ENCFF785DWK 140 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 209 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 211 bp overlap
ELF3 2 datasets
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 211 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 211 bp overlap
EOMES 3 datasets
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
Motif ES_0h ES_0h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 201 bp overlap
EP300 2 datasets
ChIP hESC GSE17917.EP300.hESC 174 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 128 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 144 bp overlap
EZH2 7 datasets
ChIP A673 ENCFF790MVL 133 bp overlap
ChIP GM23248 ENCFF404ZHM 50 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 83 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 174 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 72 bp overlap
ChIP keratinocyte ENCFF070STK 125 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 211 bp overlap
FOXA1 16 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 67 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 211 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 211 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 115 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 211 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 102 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 211 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 78 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 123 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 97 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 103 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 174 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 211 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 188 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 131 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 211 bp overlap
FOXA2 2 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 184 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 211 bp overlap
GATA3 2 datasets
ChIP T-47D ENCSR000BMX.GATA3.T-47D 134 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 177 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 203 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 211 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 211 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 211 bp overlap
HDAC1 3 datasets
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 206 bp overlap
ChIP MCF-7_parental GSE123284.HDAC1.MCF-7_parental 211 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 138 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 157 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 211 bp overlap
HOXB13 2 datasets
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 154 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 98 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 211 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 211 bp overlap
IRF4 2 datasets
Motif DE_24h DE_24h-IRF4_MA1419.2 14 bp overlap
Motif ES_0h ES_0h-IRF4_MA1419.2 14 bp overlap
IRF5 2 datasets
Motif DE_24h DE_24h-IRF5_MA1420.1 14 bp overlap
Motif ES_0h ES_0h-IRF5_MA1420.1 14 bp overlap
IRF7 2 datasets
Motif DE_24h DE_24h-IRF7_MA0772.2 13 bp overlap
Motif ES_0h ES_0h-IRF7_MA0772.2 13 bp overlap
IRF8 2 datasets
Motif DE_24h DE_24h-IRF8_MA0652.2 13 bp overlap
Motif ES_0h ES_0h-IRF8_MA0652.2 13 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 130 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 211 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 211 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 211 bp overlap
JUND 3 datasets
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 211 bp overlap
ChIP H1 ENCFF468JZD 199 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 151 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 140 bp overlap
MAX 5 datasets
ChIP H1 ENCFF601FOM 97 bp overlap
ChIP H1 ENCFF914VQY 137 bp overlap
ChIP MCF-7 ENCFF169IXS 211 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 192 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 211 bp overlap
MAZ 1 dataset
ChIP MCF-7 ENCSR288IJC.MAZ.MCF-7 150 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 83 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 132 bp overlap
MEN1 2 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 211 bp overlap
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 208 bp overlap
MGA 2 datasets
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
Motif ES_0h ES_0h-MGA_MA0801.1 8 bp overlap
MGA::EVX1 2 datasets
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 211 bp overlap
MNT 1 dataset
ChIP MCF-7 ENCSR663ZZZ.MNT.MCF-7 211 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 211 bp overlap
MXI1 2 datasets
ChIP H1 ENCFF963FZS 211 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 161 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 211 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 209 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 167 bp overlap
ChIP hESC GSE18292.NANOG.hESC 135 bp overlap
NEUROD1 2 datasets
ChIP MCF-7 ENCFF232JNU 211 bp overlap
ChIP MCF-7 ENCSR006WUS.NEUROD1.MCF-7 211 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 59 bp overlap
NR3C1 1 dataset
ChIP T-47D_R5020 GSE126859.NR3C1.T-47D_R5020 211 bp overlap
POLR2A 6 datasets
ChIP GM23338 ENCFF450WCS 211 bp overlap
ChIP H1 ENCFF566JSR 87 bp overlap
ChIP H1 ENCFF770YBQ 118 bp overlap
ChIP H1 ENCFF833NJP 147 bp overlap
ChIP body of pancreas ENCFF501FEC 211 bp overlap
ChIP body of pancreas ENCFF501FEC 146 bp overlap
POU5F1 5 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 211 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 211 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 211 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 206 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 211 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 211 bp overlap
PRDM15 2 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 118 bp overlap
ChIP WTC11 ENCFF108TMF 211 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Prdm15 2 datasets
Motif DE_24h DE_24h-Prdm15_MA1616.2 11 bp overlap
Motif ES_0h ES_0h-Prdm15_MA1616.2 11 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 76 bp overlap
RNF2 4 datasets
ChIP K-562 ENCSR076YPO.RNF2.K-562 211 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 211 bp overlap
ChIP K562 ENCFF061ATI 104 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 211 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 211 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 211 bp overlap
ChIP H1 ENCFF896IJG 178 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 211 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 183 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 169 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 113 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 91 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 81 bp overlap
SMARCA4 6 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 211 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 180 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 156 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 91 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 211 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 211 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 211 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 50 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 206 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 138 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 163 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 178 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 211 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 178 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 211 bp overlap
SP4 2 datasets
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 120 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 179 bp overlap
SPIB 2 datasets
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 168 bp overlap
STAT3 2 datasets
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 60 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 138 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 62 bp overlap
ChIP K-562 ENCSR412CTM.SUZ12.K-562 128 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 96 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 175 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 117 bp overlap
ChIP hESC GSE122298.TBP.hESC 211 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 97 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 202 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 166 bp overlap
TBR1 2 datasets
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
Motif ES_0h ES_0h-TBR1_MA0802.2 9 bp overlap
TBX18 2 datasets
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
Motif ES_0h ES_0h-TBX2_MA0688.2 9 bp overlap
TBX3 2 datasets
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap
TEAD1 3 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 148 bp overlap
ChIP WTC11 ENCFF502QUV 211 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 155 bp overlap
TEAD4 14 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 211 bp overlap
ChIP H1 ENCFF778PAX 162 bp overlap
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 202 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 211 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 159 bp overlap
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 195 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 211 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 120 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 211 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 211 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 180 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 209 bp overlap
ChIP WTC11 ENCFF114TZS 211 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 144 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 211 bp overlap
Tbx6 2 datasets
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
Motif ES_0h ES_0h-Tbx6_MA1567.3 9 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 124 bp overlap
YY1AP1 4 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 211 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 204 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 140 bp overlap
ChIP T-47D_E2 GSE125594.YY1AP1.T-47D_E2 211 bp overlap
ZEB1 1 dataset
ChIP PDAC GSE64557.ZEB1.PDAC 96 bp overlap
ZNF24 2 datasets
Motif DE_24h DE_24h-ZNF24_MA1124.1 13 bp overlap
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF263 1 dataset
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
ZSCAN4 2 datasets
Motif DE_24h DE_24h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
Zic2 2 datasets
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap