chr1 : 67,689,796 67,690,191
395 bp 112 TFs 1 linked gene
This 395 bp open chromatin element is linked to GADD45A and is bound by 112 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GADD45A 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:67,684,796 – 67,695,191
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
112 transcription factors
Source
Cell type
AGO1 6 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 395 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 225 bp overlap
ChIP K562 ENCFF025NLP 395 bp overlap
ChIP K562 ENCFF025NLP 224 bp overlap
ChIP K562 ENCFF741BCI 395 bp overlap
ChIP K562 ENCFF741BCI 226 bp overlap
AGO2 1 dataset
ChIP HepG2 ENCFF773YDL 395 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 307 bp overlap
ChIP K562 ENCFF938UXQ 264 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 395 bp overlap
ARNT 2 datasets
ChIP K-562 ENCSR613NUC.ARNT.K-562 268 bp overlap
ChIP K562 ENCFF451RAF 247 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 381 bp overlap
BCLAF1 1 dataset
ChIP K562 ENCFF936NCS 304 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 361 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 105 bp overlap
BRD4 11 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 230 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 231 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 231 bp overlap
ChIP K562 ENCFF092PWQ 106 bp overlap
ChIP K562 ENCFF092PWQ 309 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 194 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 194 bp overlap
ChIP SUM159PT_300nMJQ1_24h GSE87418.BRD4.SUM159PT_300nMJQ1_24h 89 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 395 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 395 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 201 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 308 bp overlap
CBFA2T3 3 datasets
ChIP K-562 GSE142227.CBFA2T3.K-562 154 bp overlap
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 349 bp overlap
ChIP K562 ENCFF673OEZ 268 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 249 bp overlap
CHD1 1 dataset
ChIP K562 ENCFF118VJV 53 bp overlap
CHD2 1 dataset
ChIP Hep-G2 ENCSR000EED.CHD2.Hep-G2 241 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 129 bp overlap
ChIP K562 ENCFF180STA 296 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 245 bp overlap
ChIP K562 ENCFF403WPG 395 bp overlap
CTCF 3 datasets
ChIP PC-9 ENCFF539ULB 351 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 246 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 100 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 174 bp overlap
DDX20 1 dataset
ChIP K-562 ENCSR446LAV.DDX20.K-562 395 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 362 bp overlap
ChIP K562 ENCFF775HUO 264 bp overlap
E2F7 1 dataset
ChIP IMR-90_SENES_SHCTR GSE40343.E2F7.IMR-90_SENES_SHCTR 153 bp overlap
E2F8 1 dataset
ChIP K-562 ENCSR953DVM.E2F8.K-562 395 bp overlap
ELF4 3 datasets
ChIP K-562 ENCSR638QHV.ELF4.K-562 310 bp overlap
ChIP K562 ENCFF454SBL 214 bp overlap
ChIP K562 ENCFF454SBL 343 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 145 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 224 bp overlap
ChIP K562 ENCFF226VMS 271 bp overlap
ETS1 2 datasets
ChIP HEY-A8 GSE101832.ETS1.HEY-A8 118 bp overlap
ChIP OVCAR-8 GSE101832.ETS1.OVCAR-8 318 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 296 bp overlap
ChIP DE DE-FOXA2-2 222 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 90 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 302 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 156 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 157 bp overlap
ChIP erythroblast ENCFF867JAR 395 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 395 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 191 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 82 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 351 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 351 bp overlap
ChIP DE DE-GATA4-2 377 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 312 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 356 bp overlap
ChIP DE DE-GATA6-2 392 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 281 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 284 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 330 bp overlap
ChIP foregut GSE117136.GATA6.foregut 267 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 170 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 322 bp overlap
GMEB1 2 datasets
ChIP K-562 ENCSR928KOR.GMEB1.K-562 326 bp overlap
ChIP K562 ENCFF705LHX 395 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 262 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 206 bp overlap
ChIP K562 ENCFF744ALD 300 bp overlap
HMBOX1 4 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 298 bp overlap
ChIP K562 ENCFF055GAZ 259 bp overlap
ChIP K562 ENCFF317JJX 259 bp overlap
ChIP K562 ENCFF317JJX 341 bp overlap
HMG20A 1 dataset
ChIP K562 ENCFF840WDB 395 bp overlap
ILF3 1 dataset
ChIP K-562 ENCSR632TJQ.ILF3.K-562 125 bp overlap
JUND 6 datasets
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 395 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 186 bp overlap
ChIP K562 ENCFF830LVJ 256 bp overlap
ChIP SK-N-SH ENCFF551NEQ 321 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 97 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 229 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF128TYE 395 bp overlap
KDM5B 1 dataset
ChIP K-562 ENCSR000AQA.KDM5B.K-562 113 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 395 bp overlap
LHX2 2 datasets
ChIP retina_pigment GSE60024.LHX2.retina_pigment 51 bp overlap
ChIP retina_pigment GSE60024.LHX2.retina_pigment 178 bp overlap
MED1 1 dataset
ChIP SUM159PT_300nMJQ1_24h GSE87418.MED1.SUM159PT_300nMJQ1_24h 286 bp overlap
MTA2 1 dataset
ChIP K562 ENCFF880VZB 286 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR914NEI.MTA3.K-562 269 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 341 bp overlap
MYC 2 datasets
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 395 bp overlap
ChIP PAVE GSE47152.MYC.PAVE 168 bp overlap
MYNN 2 datasets
ChIP K-562 ENCSR737LTZ.MYNN.K-562 166 bp overlap
ChIP K562 ENCFF399UNK 334 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 256 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 362 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 395 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 244 bp overlap
ChIP K562 ENCFF788MPU 311 bp overlap
ChIP K562 ENCFF866HRM 149 bp overlap
NEUROD1 2 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 206 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 296 bp overlap
NFATC3 2 datasets
ChIP K-562 ENCSR670FDA.NFATC3.K-562 109 bp overlap
ChIP K-562 ENCSR051OUX.NFATC3.K-562 325 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 198 bp overlap
ChIP K562 ENCFF167YID 284 bp overlap
NONO 1 dataset
ChIP HepG2 ENCFF313ACY 82 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 175 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 254 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 112 bp overlap
PHTF2 1 dataset
ChIP K562 ENCFF723SOM 285 bp overlap
PML 2 datasets
ChIP K562 ENCFF801LKH 387 bp overlap
ChIP K562 ENCFF801LKH 292 bp overlap
POLR2A 21 datasets
ChIP GM18951 ENCFF079KKO 345 bp overlap
ChIP H1 ENCFF833NJP 282 bp overlap
ChIP HCT116 ENCFF508RDJ 395 bp overlap
ChIP HeLa-S3 ENCFF773DNG 395 bp overlap
ChIP HepG2 ENCFF252NAR 295 bp overlap
ChIP K562 ENCFF137JSF 119 bp overlap
ChIP K562 ENCFF137JSF 395 bp overlap
ChIP K562 ENCFF137JSF 119 bp overlap
ChIP K562 ENCFF214YGX 395 bp overlap
ChIP K562 ENCFF215CWW 395 bp overlap
ChIP K562 ENCFF262YXJ 395 bp overlap
ChIP K562 ENCFF514URW 302 bp overlap
ChIP K562 ENCFF757TUO 395 bp overlap
ChIP K562 ENCFF836GHX 370 bp overlap
ChIP Panc1 ENCFF290KAB 395 bp overlap
ChIP endothelial cell of umbilical vein ENCFF091YHT 390 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 389 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 395 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 280 bp overlap
ChIP erythroblast ENCFF498VMR 395 bp overlap
ChIP stomach ENCFF820WZN 343 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 194 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF648YPL 209 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 395 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 239 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 215 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 306 bp overlap
ChIP HepG2 ENCFF939HTZ 309 bp overlap
RBM22 1 dataset
ChIP K562 ENCFF420JDS 186 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 225 bp overlap
RELA 1 dataset
ChIP U2OS_10Gy_2h_recovery GSE109996.RELA.U2OS_10Gy_2h_recovery 395 bp overlap
REST 2 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 190 bp overlap
ChIP K562 ENCFF688UKW 249 bp overlap
RHOXF2B 1 dataset
ChIP K562 ENCFF249USN 198 bp overlap
SIN3A 3 datasets
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 184 bp overlap
ChIP SK-N-SH ENCFF931NFD 341 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 395 bp overlap
SIRT6 1 dataset
ChIP K-562 ENCSR000AUB.SIRT6.K-562 145 bp overlap
SMAD1 1 dataset
ChIP K562 ENCFF104YGG 317 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 166 bp overlap
SMAD3 2 datasets
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 194 bp overlap
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 176 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 395 bp overlap
SMARCA4 1 dataset
ChIP K562 ENCFF506JCB 320 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 185 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 293 bp overlap
ChIP K562 ENCFF059YCJ 345 bp overlap
SRSF4 1 dataset
ChIP K-562 GSE120104.SRSF4.K-562 134 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 266 bp overlap
STAT3 1 dataset
ChIP HCC1143_EtOH GSE85579.STAT3.HCC1143_EtOH 78 bp overlap
STAT5A 2 datasets
ChIP K-562 ENCSR000BRR.STAT5A.K-562 178 bp overlap
ChIP K562 ENCFF226BTJ 281 bp overlap
SUPT5H 10 datasets
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 395 bp overlap
ChIP DLD-1_NELFE-AID_treated GSE144786.SUPT5H.DLD-1_NELFE-AID_treated 173 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 233 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 225 bp overlap
ChIP K562 ENCFF902PAW 395 bp overlap
ChIP U2OS_DMSO GSE115365.SUPT5H.U2OS_DMSO 142 bp overlap
ChIP U2OS_DMSO GSE115365.SUPT5H.U2OS_DMSO 138 bp overlap
ChIP U2OS_THZ1 GSE115365.SUPT5H.U2OS_THZ1 299 bp overlap
ChIP U2OS_siMYC_High GSE115365.SUPT5H.U2OS_siMYC_High 131 bp overlap
ChIP U2OS_siMYC_ON GSE115365.SUPT5H.U2OS_siMYC_ON 395 bp overlap
TAF1 1 dataset
ChIP K-562 ENCSR000BKS.TAF1.K-562 171 bp overlap
TAL1 5 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 227 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 338 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 194 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 141 bp overlap
ChIP K562 ENCFF661CCK 274 bp overlap
TBL1XR1 2 datasets
ChIP K-562 ENCSR000EGB.TBL1XR1.K-562 247 bp overlap
ChIP K562 ENCFF899VEC 310 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 281 bp overlap
ChIP K562 ENCFF931DJY 354 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 254 bp overlap
ChIP K562 ENCFF319QZT 299 bp overlap
TCF7L2 2 datasets
ChIP Panc1 ENCFF829HHL 213 bp overlap
ChIP Panc1 ENCFF829HHL 395 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 315 bp overlap
TP53 1 dataset
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 103 bp overlap
TP63 2 datasets
ChIP A549 ENCFF399JYQ 253 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 208 bp overlap
XRN2 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.XRN2.DLD-1_NELFCD-AID_treated 207 bp overlap
ZBTB11 1 dataset
ChIP GM12878 ENCFF431EUZ 268 bp overlap
ZBTB17 1 dataset
ChIP K562 ENCFF731UTU 164 bp overlap
ZC3H13 1 dataset
ChIP HepG2 ENCFF444JZJ 81 bp overlap
ZEB2 5 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 395 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 395 bp overlap
ChIP K562 ENCFF795CMH 240 bp overlap
ChIP K562 ENCFF975RXS 392 bp overlap
ChIP K562 ENCFF975RXS 264 bp overlap
ZMIZ1 1 dataset
ChIP K-562 ENCSR000EFQ.ZMIZ1.K-562 199 bp overlap
ZNF24 5 datasets
ChIP Hep-G2 ENCSR362NWP.ZNF24.Hep-G2 347 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 392 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 395 bp overlap
ChIP K-562 ENCSR385AHH.ZNF24.K-562 278 bp overlap
ChIP K562 ENCFF615YYW 304 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF271FQR 332 bp overlap
ZNF700 1 dataset
ChIP K562 ENCFF657OXY 209 bp overlap