chr1 : 64,229,252 64,229,618
366 bp 128 TFs 0 linked genes
This 366 bp open chromatin element has no linked target genes and is bound by 128 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:64,224,252 – 64,234,618
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
128 transcription factors
Source
Cell type
ATF2 2 datasets
ChIP HEK293 ENCFF194VKZ 366 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 270 bp overlap
BCL11A 2 datasets
ChIP HEK293 ENCFF294OHB 344 bp overlap
ChIP HEK293 ENCSR021DJC.BCL11A.HEK293 352 bp overlap
BCL11B 2 datasets
ChIP HEK293 ENCFF859UHP 359 bp overlap
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 348 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 84 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 286 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCFF003PDY 304 bp overlap
DAXX 1 dataset
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 139 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 197 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 294 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 309 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 349 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 234 bp overlap
FOXA1 1 dataset
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 319 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 335 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 251 bp overlap
GATA3 3 datasets
ChIP Kelly GSE94822.GATA3.Kelly 366 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 216 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 160 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 366 bp overlap
ChIP DE DE-GATA4-2 366 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 366 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 366 bp overlap
ChIP DE DE-GATA6-2 366 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 366 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 366 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 366 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 303 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 366 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 366 bp overlap
GFI1B 2 datasets
ChIP HEK293 ENCFF264FBS 325 bp overlap
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 277 bp overlap
GLI2 2 datasets
ChIP HEK293 ENCFF700EUN 305 bp overlap
ChIP HEK293 ENCSR978EQY.GLI2.HEK293 252 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 366 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 262 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 359 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 317 bp overlap
Hand1 1 dataset
Motif DE_36h DE_36h-Hand1_MA2123.1 9 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 183 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 239 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 364 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 225 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 180 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 354 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 290 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 342 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 326 bp overlap
KLF3 1 dataset
ChIP HEK293 GSE69739.KLF3.HEK293 283 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 207 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCFF599UKL 337 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 187 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 314 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 243 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 334 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 229 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 227 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 366 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 330 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 254 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 366 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 366 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 344 bp overlap
OVOL3 2 datasets
ChIP HEK293 ENCFF898STB 357 bp overlap
ChIP HEK293 ENCSR768LIO.OVOL3.HEK293 285 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 366 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 349 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 210 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 198 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 220 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 326 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 259 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 259 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 366 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 366 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 366 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 258 bp overlap
SMAD2 1 dataset
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 202 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 361 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SMC3 1 dataset
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 232 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 242 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 281 bp overlap
SP3 3 datasets
ChIP HEK293 ENCFF087XLA 366 bp overlap
ChIP HEK293 ENCFF087XLA 219 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 274 bp overlap
SP5_Zebrafish 2 datasets
ChIP HEK293_Zebrafish_dDBD GSE121316.SP5_Zebrafish.HEK293_Zebrafish_dDBD 305 bp overlap
ChIP HEK293_dDBD GSE110277.SP5_Zebrafish.HEK293_dDBD 302 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 338 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 366 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 176 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 350 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 250 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 241 bp overlap
TCF7L2 3 datasets
ChIP HEK293 ENCFF513JQN 366 bp overlap
ChIP HEK293 ENCFF513JQN 273 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 318 bp overlap
TEAD4 1 dataset
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 210 bp overlap
TFAP4 1 dataset
Motif DE_36h DE_36h-TFAP4_MA0691.1 10 bp overlap
TRIM28 7 datasets
ChIP HEK293 ENCFF265CEM 366 bp overlap
ChIP HEK293 ENCFF265CEM 321 bp overlap
ChIP HEK293 ENCFF582MWI 159 bp overlap
ChIP HEK293 ENCFF582MWI 366 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 363 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 338 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 331 bp overlap
TSHZ1 2 datasets
ChIP HEK293 ENCFF893BGV 337 bp overlap
ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 342 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 1 dataset
Motif DE_36h DE_36h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 305 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 366 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 366 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 366 bp overlap
ZBTB12 2 datasets
ChIP HEK293 ENCFF963HPT 276 bp overlap
ChIP HEK293 ENCSR543KOA.ZBTB12.HEK293 207 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 366 bp overlap
ZBTB21 2 datasets
ChIP HEK293 ENCFF509WYZ 366 bp overlap
ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 277 bp overlap
ZBTB26 1 dataset
Motif DE_36h DE_36h-ZBTB26_MA1579.2 8 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 310 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 313 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 366 bp overlap
ZBTB6 3 datasets
ChIP HEK293 ENCFF881ECZ 83 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 308 bp overlap
ChIP HEK293 ENCSR619OUC.ZBTB6.HEK293 291 bp overlap
ZKSCAN3 1 dataset
Motif DE_36h DE_36h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 263 bp overlap
ZNF140 1 dataset
Motif DE_36h DE_36h-ZNF140_MA1589.2 19 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 366 bp overlap
ChIP HEK293 ENCFF066NGR 215 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 361 bp overlap
ZNF184 2 datasets
ChIP HEK293 ENCFF221CII 299 bp overlap
ChIP HEK293 ENCSR020UPN.ZNF184.HEK293 259 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 175 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 322 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 122 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 354 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 152 bp overlap
ZNF324 3 datasets
ChIP HEK293 ENCFF062DPE 361 bp overlap
ChIP HEK293 ENCSR768HOH.ZNF324.HEK293 319 bp overlap
ChIP HEK293 GSE76494.ZNF324.HEK293 263 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 243 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 275 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 248 bp overlap
ZNF366 3 datasets
ChIP HEK293 ENCFF799ATK 229 bp overlap
ChIP HEK293 ENCFF799ATK 218 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 361 bp overlap
ZNF391 1 dataset
ChIP HEK293 ENCFF835SNY 342 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 129 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 291 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCFF184XEW 366 bp overlap
ZNF426 1 dataset
ChIP HEK293 ENCFF957XYN 287 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 357 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 236 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 172 bp overlap
ZNF513 1 dataset
ChIP HEK293 ENCFF457TCC 346 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 233 bp overlap
ZNF529 1 dataset
ChIP HEK293 ENCFF090MHG 342 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 348 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 291 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 274 bp overlap
ZNF610 2 datasets
ChIP HEK293 ENCFF778UKJ 269 bp overlap
ChIP HEK293 ENCSR691TXI.ZNF610.HEK293 366 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 247 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 329 bp overlap
ZNF639 2 datasets
ChIP HEK293 ENCFF971ZNH 363 bp overlap
ChIP HEK293 ENCSR080CST.ZNF639.HEK293 333 bp overlap
ZNF695 1 dataset
ChIP HEK293T GSE78099.ZNF695.HEK293T 58 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 60 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 294 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 257 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 362 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 197 bp overlap
ZSCAN21 2 datasets
ChIP HEK293 ENCFF582WUP 352 bp overlap
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 317 bp overlap
ZSCAN23 2 datasets
ChIP HEK293 ENCFF127TFV 206 bp overlap
ChIP HEK293 ENCSR705ASR.ZSCAN23.HEK293 366 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 337 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 234 bp overlap
ZSCAN4 1 dataset
ChIP HEK293 ENCFF381BKT 366 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 231 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 343 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 295 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 366 bp overlap