chr3 : 54,629,133 54,631,195
2,062 bp 122 TFs 1 linked gene
This 2.1 kb open chromatin element is linked to ESRG and is bound by 122 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ESRG 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:54,624,133 – 54,636,195
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
122 transcription factors
Source
Cell type
AFF4 3 datasets
ChIP WTC11 ENCFF556XTF 445 bp overlap
ChIP WTC11 ENCFF556XTF 445 bp overlap
ChIP WTC11 ENCFF556XTF 259 bp overlap
AR 3 datasets
ChIP WTC11 ENCFF267GQJ 135 bp overlap
ChIP WTC11 ENCFF267GQJ 407 bp overlap
ChIP WTC11 ENCFF267GQJ 81 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 50 bp overlap
ASCL1 1 dataset
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 332 bp overlap
ATF1 2 datasets
ChIP WTC11 ENCFF354DFT 451 bp overlap
ChIP WTC11 ENCFF354DFT 451 bp overlap
ATF2 6 datasets
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 214 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 931 bp overlap
Ascl2 1 dataset
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 345 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 749 bp overlap
BRD4 1 dataset
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 262 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 202 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 148 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 225 bp overlap
CREM 2 datasets
ChIP WTC11 ENCFF209ZUE 415 bp overlap
ChIP WTC11 ENCFF209ZUE 481 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 508 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 292 bp overlap
ChIP BLaER1 ENCFF093OYK 260 bp overlap
ChIP BLaER1 ENCFF274GAT 446 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 242 bp overlap
E2F1 2 datasets
ChIP WTC11 ENCFF994SXO 417 bp overlap
ChIP WTC11 ENCFF994SXO 417 bp overlap
E2F6 6 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 168 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 374 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 214 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 225 bp overlap
EMX1 2 datasets
ChIP WTC11 ENCFF692RZJ 507 bp overlap
ChIP WTC11 ENCFF692RZJ 288 bp overlap
EOMES 1 dataset
Motif ES_0h ES_0h-EOMES_MA0800.2 9 bp overlap
ERG 2 datasets
ChIP WTC11 ENCFF011YUL 281 bp overlap
ChIP WTC11 ENCFF011YUL 54 bp overlap
ESR1 1 dataset
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 251 bp overlap
ESRRA 2 datasets
ChIP WTC11 ENCFF591YCA 425 bp overlap
ChIP WTC11 ENCFF591YCA 425 bp overlap
ETV1 1 dataset
ChIP GIST GSE22441.ETV1.GIST 225 bp overlap
EZH2 4 datasets
ChIP PC-9 ENCSR793USK.EZH2.PC-9 472 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 296 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 529 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 258 bp overlap
FOS 4 datasets
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 177 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 183 bp overlap
ChIP MCF-7 ENCFF282FWZ 302 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 358 bp overlap
FOSL2 2 datasets
ChIP MCF-7 ENCFF188KBZ 455 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 143 bp overlap
FOXA1 2 datasets
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 220 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 169 bp overlap
FOXP1 4 datasets
ChIP H9 GSE31006.FOXP1.H9 161 bp overlap
ChIP H9 GSE31006.FOXP1.H9 488 bp overlap
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
ChIP WTC11 ENCFF338WGC 525 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 71 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 282 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 345 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 645 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 420 bp overlap
HDAC6 1 dataset
ChIP WA01 ENCSR000ATQ.HDAC6.WA01 137 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 227 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 309 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 337 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 263 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 317 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 344 bp overlap
JUND 4 datasets
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 155 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 179 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 202 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 248 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 236 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 189 bp overlap
ChIP WTC11 ENCFF223QFY 585 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif ES_0h ES_0h-MGA_MA0801.1 8 bp overlap
MXD4 1 dataset
ChIP WTC11 ENCFF044PLT 265 bp overlap
MYF5 1 dataset
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
MYOD1 1 dataset
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
MYOG 1 dataset
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
Mecom 1 dataset
Motif ES_0h ES_0h-Mecom_MA0029.2 11 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 547 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 211 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 399 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 188 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NFATC4 3 datasets
ChIP WTC11 ENCFF744MZI 271 bp overlap
ChIP WTC11 ENCFF744MZI 271 bp overlap
ChIP WTC11 ENCFF744MZI 271 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 377 bp overlap
NHLH1 1 dataset
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NIPBL 1 dataset
ChIP WA09 GSE105028.NIPBL.WA09 538 bp overlap
NR3C1 1 dataset
ChIP WTC11 ENCFF422OEM 557 bp overlap
NRF1 2 datasets
ChIP H1 ENCFF582PEJ 245 bp overlap
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 108 bp overlap
Olig2 1 dataset
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PAX5 1 dataset
ChIP GM12891 ENCSR000BJH.PAX5.GM12891 124 bp overlap
PBX3 1 dataset
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
PKNOX1 1 dataset
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 11 datasets
ChIP GM23338 ENCFF450WCS 53 bp overlap
ChIP GM23338 ENCFF450WCS 1652 bp overlap
ChIP H1 ENCFF566JSR 422 bp overlap
ChIP H1 ENCFF566JSR 962 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF770YBQ 215 bp overlap
ChIP H1 ENCFF833NJP 210 bp overlap
ChIP H1 ENCFF833NJP 741 bp overlap
ChIP H1 ENCFF833NJP 240 bp overlap
POU5F1 13 datasets
ChIP BG03 GSE21614.POU5F1.BG03 197 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 738 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 596 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 260 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 281 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 270 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 222 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 466 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 545 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 315 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 148 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 443 bp overlap
PRRX2 4 datasets
ChIP WTC11 ENCFF107JGJ 301 bp overlap
ChIP WTC11 ENCFF107JGJ 148 bp overlap
ChIP WTC11 ENCFF107JGJ 301 bp overlap
ChIP WTC11 ENCFF107JGJ 99 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 241 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 276 bp overlap
SIRT6 2 datasets
ChIP H1 ENCFF843QCB 265 bp overlap
ChIP WA01 ENCSR000AUS.SIRT6.WA01 252 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 287 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 346 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 165 bp overlap
ChIP WTC11 ENCFF815YYQ 349 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 238 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 387 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 300 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 272 bp overlap
SP4 2 datasets
ChIP H1 ENCFF473YOB 597 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 656 bp overlap
STAG2 1 dataset
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 174 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 337 bp overlap
TBR1 1 dataset
Motif ES_0h ES_0h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif ES_0h ES_0h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif ES_0h ES_0h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif ES_0h ES_0h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif ES_0h ES_0h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif ES_0h ES_0h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif ES_0h ES_0h-TBX4_MA0806.1 8 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 175 bp overlap
TEAD1 3 datasets
ChIP WTC11 ENCFF502QUV 182 bp overlap
ChIP WTC11 ENCFF502QUV 405 bp overlap
ChIP WTC11 ENCFF502QUV 256 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 441 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 688 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 193 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 347 bp overlap
Tbx6 1 dataset
Motif ES_0h ES_0h-Tbx6_MA1567.3 9 bp overlap
Tcf12 1 dataset
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 425 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 161 bp overlap
ZBTB18 1 dataset
Motif ES_0h ES_0h-ZBTB18_MA0698.2 11 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 401 bp overlap
ZBTB24 1 dataset
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZBTB7C 1 dataset
Motif ES_0h ES_0h-ZBTB7C_MA0695.2 8 bp overlap
ZKSCAN8 1 dataset
ChIP WTC11 ENCFF666HNJ 345 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 66 bp overlap
ZNF114 3 datasets
ChIP GM23338 ENCFF631OSW 357 bp overlap
ChIP GM23338 ENCFF631OSW 357 bp overlap
ChIP GM23338 ENCSR555KFE.ZNF114.GM23338 344 bp overlap
ZNF143 3 datasets
ChIP WA09 GSE105028.ZNF143.WA09 381 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 530 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 246 bp overlap
ZNF184 3 datasets
ChIP WTC11 ENCFF352POG 497 bp overlap
ChIP WTC11 ENCFF352POG 497 bp overlap
ChIP WTC11 ENCFF352POG 497 bp overlap
ZNF224 1 dataset
ChIP HEK293 GSE76494.ZNF224.HEK293 202 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 461 bp overlap
ZNF281 1 dataset
ChIP WTC11 ENCFF551GAV 377 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 301 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 173 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF425 2 datasets
ChIP WTC11 ENCFF359IXT 361 bp overlap
ChIP WTC11 ENCFF359IXT 370 bp overlap
ZNF462 3 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 869 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 677 bp overlap
ZNF532 2 datasets
ChIP WTC11 ENCFF373VBX 285 bp overlap
ChIP WTC11 ENCFF373VBX 177 bp overlap
ZNF671 2 datasets
ChIP WTC11 ENCFF053HBV 188 bp overlap
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF75A 1 dataset
Motif ES_0h ES_0h-ZNF75A_MA2097.1 12 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 257 bp overlap