chr2 : 213,929,014 213,929,524
510 bp 142 TFs 0 linked genes
This 510 bp open chromatin element has no linked target genes and is bound by 142 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:213,924,014 – 213,934,524
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
142 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 247 bp overlap
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 269 bp overlap
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 134 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 199 bp overlap
ATF2 1 dataset
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 256 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 147 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRD4 1 dataset
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 195 bp overlap
CBX3 2 datasets
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 238 bp overlap
ChIP HCT116 ENCFF947BOL 333 bp overlap
CDX2 1 dataset
ChIP LS180_125 GSE31939.CDX2.LS180_125 143 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CTBP1 2 datasets
ChIP MCF-7 ENCFF969VBY 358 bp overlap
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 256 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 222 bp overlap
ChIP BLaER1 ENCFF274GAT 271 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
DPF2 2 datasets
ChIP MCF-7 ENCFF712EXQ 314 bp overlap
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 268 bp overlap
EGR3 1 dataset
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
EGR4 1 dataset
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ESR1 23 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 311 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 317 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 161 bp overlap
ChIP MCF-7 GSE95302.ESR1.MCF-7 253 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 134 bp overlap
ChIP MCF-7L_t0 GSE108787.ESR1.MCF-7L_t0 246 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 195 bp overlap
ChIP MCF-7_E2-80min-ERalpha GSE94023.ESR1.MCF-7_E2-80min-ERalpha 173 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 317 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 190 bp overlap
ChIP MCF-7_Fulv GSE115607.ESR1.MCF-7_Fulv 249 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 279 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 164 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 195 bp overlap
ChIP MCF-7_Sat-H3B-6545 GSE115607.ESR1.MCF-7_Sat-H3B-6545 194 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 173 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 315 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 296 bp overlap
ChIP MCF-7_estradiol-aldosterone_4h GSE99626.ESR1.MCF-7_estradiol-aldosterone_4h 180 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 325 bp overlap
ChIP MCF-7_s5942 GSE115607.ESR1.MCF-7_s5942 259 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 273 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 289 bp overlap
ESR1_Y537N 3 datasets
ChIP MCF-7_E2_talen GSE94493.ESR1_Y537N.MCF-7_E2_talen 187 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 147 bp overlap
ChIP MCF-7_talen GSE94493.ESR1_Y537N.MCF-7_talen 230 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOS 3 datasets
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
ChIP MCF-7 ENCFF282FWZ 360 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 341 bp overlap
FOSL1 3 datasets
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 225 bp overlap
ChIP HCT116 ENCFF540ZXN 145 bp overlap
FOSL2 8 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 169 bp overlap
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
ChIP MCF-7 ENCFF188KBZ 380 bp overlap
ChIP MCF-7 ENCFF716UWP 282 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 193 bp overlap
ChIP MCF-7 ENCSR546KCN.FOSL2.MCF-7 209 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 138 bp overlap
FOXA1 2 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 196 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 134 bp overlap
GATA3 14 datasets
ChIP MCF-7 ENCFF178GBS 461 bp overlap
ChIP MCF-7 ENCFF352QVM 359 bp overlap
ChIP MCF-7 ENCFF437NQS 229 bp overlap
ChIP MCF-7 ENCFF695MAU 382 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 223 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 319 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 299 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 228 bp overlap
ChIP MCF-7_DMSO GSE29073.GATA3.MCF-7_DMSO 204 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 197 bp overlap
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 150 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 171 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 147 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 157 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 82 bp overlap
GLI3 1 dataset
Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap
GRHL2 1 dataset
ChIP MCF-7 GSE109820.GRHL2.MCF-7 160 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Gli1 1 dataset
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Gli2 2 datasets
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
HSF1 1 dataset
ChIP HCT-116_A10_43 GSE152144.HSF1.HCT-116_A10_43 114 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 299 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 385 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 258 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 306 bp overlap
ChIP MCF-7_E2 GSE102410.JUN.MCF-7_E2 208 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.JUN.MCF-7_Tamoxifen 200 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 7 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 210 bp overlap
ChIP HCT116 ENCFF748ZQX 256 bp overlap
ChIP HepG2 ENCFF869OPW 254 bp overlap
ChIP MCF-7 ENCSR000BSU.JUND.MCF-7 224 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 149 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 176 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
MBD2 1 dataset
ChIP MCF-7 ENCSR940MHE.MBD2.MCF-7 136 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 208 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 200 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 191 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
NFKB1 1 dataset
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
NIPBL 2 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 317 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 229 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap
Nkx3-2 1 dataset
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 205 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PAX2 1 dataset
Motif DE_12h DE_12h-PAX2_MA0067.3 16 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 243 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 76 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
PKNOX2 1 dataset
Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU5F1 1 dataset
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
PPARG 1 dataset
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
RAD21 2 datasets
ChIP HCT116 ENCFF568PEO 213 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 115 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
SIN3A 2 datasets
ChIP MCF-7 ENCFF521RDC 398 bp overlap
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 237 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 122 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 317 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.SMARCA4.MCF-7_ARID1A-KO 238 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 200 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 337 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 226 bp overlap
SMARCD3 2 datasets
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 234 bp overlap
ChIP MCF-7_KO GSE124225.SMARCD3.MCF-7_KO 180 bp overlap
SNAI2 1 dataset
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 323 bp overlap
SP1 2 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 222 bp overlap
ChIP HCT116 ENCFF800LBN 300 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 245 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF12 1 dataset
ChIP MCF-7 ENCFF329MRX 417 bp overlap
TCF4 1 dataset
ChIP LS180_125 GSE31939.TCF4.LS180_125 98 bp overlap
TCF7L2 10 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 283 bp overlap
ChIP HCT-116_C16 GSE127960.TCF7L2.HCT-116_C16 220 bp overlap
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 173 bp overlap
ChIP HCT-116_WT GSE127960.TCF7L2.HCT-116_WT 198 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 236 bp overlap
ChIP HCT116 ENCFF038POZ 202 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 255 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 300 bp overlap
ChIP MCF-7 ENCFF219LIX 166 bp overlap
ChIP MCF-7 ENCSR000EWT.TCF7L2.MCF-7 306 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 168 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
TP53 1 dataset
ChIP HCT-116_Nutlin3a GSE125927.TP53.HCT-116_Nutlin3a 189 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
WDHD1 2 datasets
ChIP MCF-7_Ab_R1251-1-1A5 GSE97661.WDHD1.MCF-7_Ab_R1251-1-1A5 158 bp overlap
ChIP MCF-7_Ab_R1251-1-1B10 GSE97661.WDHD1.MCF-7_Ab_R1251-1-1B10 127 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 145 bp overlap
ZBTB18 1 dataset
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
ZBTB7B 1 dataset
Motif DE_12h DE_12h-ZBTB7B_MA0694.2 10 bp overlap
ZBTB7C 1 dataset
Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZHX2 1 dataset
ChIP MCF-7 ENCSR876UYH.ZHX2.MCF-7 146 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF24 2 datasets
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ChIP MCF-7 ENCSR503VTG.ZNF24.MCF-7 216 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZXDC 1 dataset
ChIP MCF-7 GSE97661.ZXDC.MCF-7 238 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap