chr1 : 47,992,446 – 47,993,200
754 bp 100 TFs 1 linked gene
This 754 bp open chromatin element is linked to TRABD2B and is bound by 100 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TRABD2B 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:47,987,446 – 47,998,200
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 409 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 402 bp overlap
BRD4 6 datasets
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 239 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 283 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 243 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 318 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 724 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 268 bp overlap
CEBPB 1 dataset
ChIP hMSC GSE68864.CEBPB.hMSC 335 bp overlap
CTCF 4 datasets
ChIP artery_tibial ENCSR699BEK.CTCF.artery_tibial 239 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR074SFL.CTCF.esophagus_muscularis-mucosa 186 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 221 bp overlap
ChIP tibial artery ENCFF882IXS 397 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 278 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 185 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 251 bp overlap
EP300 2 datasets
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 296 bp overlap
ChIP tibial nerve ENCFF346AYA 416 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 326 bp overlap
EZH2 8 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 754 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 552 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 295 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 150 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 749 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 269 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 236 bp overlap
ChIP fibroblast of lung ENCFF479BAW 605 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 282 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 441 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 276 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 159 bp overlap
FLI1 5 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 500 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 431 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 223 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 349 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 463 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 491 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 346 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 492 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 488 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 549 bp overlap
GFI1B 2 datasets
ChIP HEK293 ENCFF264FBS 325 bp overlap
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 277 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 206 bp overlap
GTF2B 1 dataset
ChIP HeLa_ASYNC GSE71848.GTF2B.HeLa_ASYNC 193 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 110 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 270 bp overlap
HNF4A 1 dataset
ChIP liver ERP002306.HNF4A.liver 183 bp overlap
HNRNPLL 1 dataset
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 173 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 245 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 440 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 451 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 398 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 536 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 425 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 294 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 210 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 215 bp overlap
MED1 15 datasets
ChIP adipocyte GSE140782.MED1.adipocyte 232 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 489 bp overlap
ChIP hMSC-TERT4_D0 GSE104537.MED1.hMSC-TERT4_D0 257 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 458 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 477 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 511 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 470 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 437 bp overlap
ChIP hMSC-TERT4_adipocyte-D14 GSE113253.MED1.hMSC-TERT4_adipocyte-D14 306 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 435 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 402 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 273 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 251 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 274 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 272 bp overlap
MZF1 3 datasets
ChIP HEK293 ENCFF683ZWN 276 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 453 bp overlap
ChIP HEK293 GSE76494.MZF1.HEK293 348 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 245 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 754 bp overlap
ONECUT1 1 dataset
ChIP liver ERP002306.ONECUT1.liver 156 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 315 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 431 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 275 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 185 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 453 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 674 bp overlap
PKNOX1 1 dataset
ChIP HEK293T ENCFF174WDB 189 bp overlap
POLR2A 7 datasets
ChIP esophagus muscularis mucosa ENCFF791ZXN 371 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 341 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 511 bp overlap
ChIP sigmoid colon ENCFF748YVT 445 bp overlap
ChIP stomach ENCFF820WZN 345 bp overlap
ChIP suprapubic skin ENCFF083NEJ 331 bp overlap
ChIP suprapubic skin ENCFF748PRQ 277 bp overlap
PPARG 1 dataset
ChIP ASC GSE21366.PPARG.ASC 210 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 374 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 293 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 370 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 326 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 401 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 560 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 692 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 192 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 631 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 212 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 200 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 396 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 587 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 646 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 591 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 555 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 564 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 398 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 204 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SMARCA4 4 datasets
ChIP NSC GSE125033.SMARCA4.NSC 173 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 165 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 298 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 511 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 310 bp overlap
SMARCC1 6 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 477 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 360 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 230 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 239 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 270 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 194 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 605 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 299 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 485 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 169 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 537 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 365 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 754 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 584 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 272 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 238 bp overlap
SUZ12 3 datasets
ChIP K-562 ENCSR000AUC.SUZ12.K-562 183 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.SUZ12.Karpas-422_CPI360-D4 258 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 199 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 242 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 505 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 259 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 422 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF265CEM 487 bp overlap
ChIP HEK293 ENCFF265CEM 282 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 415 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 417 bp overlap
UBN1 1 dataset
ChIP HeLa GSE45024.UBN1.HeLa 363 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 449 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 251 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 445 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 401 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 327 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 262 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 413 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 604 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 251 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 92 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 298 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 465 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 259 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 199 bp overlap
ZBTB8A 3 datasets
ChIP HEK293 ENCFF303WRD 424 bp overlap
ChIP HEK293 ENCFF303WRD 452 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 574 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 551 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 462 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 326 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 421 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 324 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 476 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 237 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 197 bp overlap
ChIP HeLa GSE39263.ZNF143.HeLa 318 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 475 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 254 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 275 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 157 bp overlap
ZNF341 4 datasets
ChIP HEK293 ENCFF944VMC 485 bp overlap
ChIP HEK293 ENCFF944VMC 285 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 482 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 233 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 240 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 551 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 344 bp overlap
ZNF423 2 datasets
ChIP HEK293 ENCFF937QHI 357 bp overlap
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 292 bp overlap
ZNF501 1 dataset
ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 262 bp overlap
ZNF518A 2 datasets
ChIP HEK293 ENCFF892ULS 441 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 295 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 256 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 262 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 525 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 417 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 202 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 289 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 286 bp overlap
ZNF76 3 datasets
ChIP HEK293 ENCFF374TCG 451 bp overlap
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 379 bp overlap
ChIP HEK293 GSE76494.ZNF76.HEK293 215 bp overlap
ZNF770 3 datasets
ChIP HEK293 ENCFF468FCG 333 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 191 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 236 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 206 bp overlap
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