chr2 : 199,581,928 199,582,474
546 bp 125 TFs 0 linked genes
This 546 bp open chromatin element has no linked target genes and is bound by 125 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:199,576,928 – 199,587,474
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 365 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 449 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BMI1 1 dataset
ChIP K-562 ENCSR782WRO.BMI1.K-562 93 bp overlap
BRD2 2 datasets
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 204 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 188 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 126 bp overlap
BRD4 7 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 117 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 154 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 166 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 182 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 376 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 194 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 362 bp overlap
BRD7 2 datasets
ChIP SUM159PT_DMSO GSE131097.BRD7.SUM159PT_DMSO 473 bp overlap
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 413 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 186 bp overlap
CBX8 3 datasets
ChIP A-549 ENCSR616MOB.CBX8.A-549 121 bp overlap
ChIP K562 ENCFF485TBL 471 bp overlap
ChIP K562 ENCFF485TBL 546 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 319 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 250 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 464 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
EZH2 3 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 147 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 226 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 206 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 165 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 369 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMSO GSE85096.HIF1A.U2OS_trough_DMSO 249 bp overlap
HSF1 1 dataset
ChIP MO91 GSE45852.HSF1.MO91 177 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 524 bp overlap
IRF2 2 datasets
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
IRF3 2 datasets
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF4 3 datasets
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 198 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 180 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 376 bp overlap
KMT2A 6 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 277 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 546 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 419 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 167 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 546 bp overlap
ChIP MOLM-13_CBS79-KO GSE114981.KMT2A.MOLM-13_CBS79-KO 191 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 214 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 395 bp overlap
MEN1 1 dataset
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 327 bp overlap
MSC 1 dataset
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 180 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 281 bp overlap
MYOD1 3 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 196 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 169 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 124 bp overlap
MYOG 2 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 382 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 546 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 439 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 179 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 198 bp overlap
NUTM1 2 datasets
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 217 bp overlap
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 206 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
OSR2 3 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
ChIP HEK293 ENCFF875BDB 421 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 300 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 257 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 278 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 126 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 315 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 358 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 546 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 546 bp overlap
PRDM1 3 datasets
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
ChIP HEK293 ENCFF302TBP 283 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 243 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 238 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 323 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 253 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 489 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 364 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 281 bp overlap
ChIP neural cell ENCFF882LXX 419 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 398 bp overlap
RNF2 7 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 369 bp overlap
ChIP K-562 ENCSR076YPO.RNF2.K-562 214 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 275 bp overlap
ChIP K-562 ENCSR076YPO.RNF2.K-562 251 bp overlap
ChIP K562 ENCFF022XJR 177 bp overlap
ChIP K562 ENCFF653BQJ 207 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 293 bp overlap
RUVBL2 3 datasets
ChIP U2OS GSE130602.RUVBL2.U2OS 471 bp overlap
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 546 bp overlap
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 443 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 213 bp overlap
SMARCA4 9 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 426 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 107 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 546 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 364 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 187 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 365 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 273 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 466 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 281 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 272 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 307 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 294 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 162 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 98 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 175 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 213 bp overlap
SPI1 1 dataset
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 156 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 380 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 119 bp overlap
TCF7L2 1 dataset
ChIP HEK293 ENCFF513JQN 203 bp overlap
TEAD4 2 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 259 bp overlap
TEF 1 dataset
Motif DE_12h DE_12h-TEF_MA0843.2 10 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF265CEM 172 bp overlap
ChIP HEK293 ENCFF265CEM 381 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
YY1 6 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 465 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 464 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 466 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 165 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 166 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 317 bp overlap
ChIP HEK293 ENCFF865LIO 275 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCFF847JIE 208 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 104 bp overlap
ChIP K-562 ENCSR776CYN.ZFP36.K-562 87 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 363 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 546 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 546 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap