chr20 : 17,936,562 17,937,470
908 bp 100 TFs 0 linked genes
This 908 bp open chromatin element has no linked target genes and is bound by 100 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:17,931,562 – 17,942,470
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 251 bp overlap
AR 9 datasets
ChIP prostate GSE56288.AR.prostate 330 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 297 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 228 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 193 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 172 bp overlap
ChIP prostate_P1 GSE130408.AR.prostate_P1 217 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 252 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 233 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 412 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 514 bp overlap
ARID2 3 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 401 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 379 bp overlap
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 293 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 250 bp overlap
BAZ2A 1 dataset
ChIP HepG2 ENCFF797RVO 374 bp overlap
BCL3 2 datasets
ChIP A-549 ENCSR000BQH.BCL3.A-549 229 bp overlap
ChIP A-549 ENCSR000BQH.BCL3.A-549 554 bp overlap
BHLHE40 2 datasets
ChIP IMR-90 ENCFF312JYK 285 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 263 bp overlap
BRD4 4 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 344 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 147 bp overlap
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 236 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 211 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 283 bp overlap
ChIP K562 ENCFF673OEZ 411 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 80 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 370 bp overlap
CHD7 2 datasets
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 308 bp overlap
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 428 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 460 bp overlap
CTCF 1 dataset
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 362 bp overlap
DDX5 2 datasets
ChIP BT-549 GSE112961.DDX5.BT-549 156 bp overlap
ChIP BT-549 GSE112961.DDX5.BT-549 216 bp overlap
DPF2 1 dataset
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 176 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 369 bp overlap
E4F1 1 dataset
ChIP GM12878 ENCSR439WAF.E4F1.GM12878 463 bp overlap
EGR1 6 datasets
ChIP K-562 ENCSR024CNP.EGR1.K-562 290 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 216 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 163 bp overlap
ChIP K562 ENCFF006PJY 245 bp overlap
ChIP K562 ENCFF113OPQ 410 bp overlap
ChIP K562 ENCFF895KGN 356 bp overlap
EP300 1 dataset
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 236 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 157 bp overlap
ESR1 6 datasets
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 253 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 253 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 404 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 347 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 194 bp overlap
ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 215 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 298 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 360 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 350 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 360 bp overlap
ETV1 2 datasets
ChIP GIST GSE22441.ETV1.GIST 352 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 231 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 887 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 163 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE112961.FOSL1.BT-549 555 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 320 bp overlap
FOXA1 5 datasets
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 206 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 157 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 201 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 131 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 351 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 78 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 141 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 135 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 273 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 400 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 261 bp overlap
GPS2 1 dataset
ChIP hMADS_D0_E GSE152517.GPS2.hMADS_D0_E 247 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR000BMG.HDAC2.K-562 145 bp overlap
HMGB2 2 datasets
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 733 bp overlap
ChIP IMR-90_proliferating GSE98245.HMGB2.IMR-90_proliferating 308 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 718 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 282 bp overlap
JUN 3 datasets
ChIP 786-O GSE86092.JUN.786-O 177 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 78 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 213 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCFF667EJQ 84 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 375 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 135 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 250 bp overlap
MED12 4 datasets
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 54 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 141 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 75 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 62 bp overlap
MXI1 1 dataset
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 148 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 462 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 162 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 694 bp overlap
MYOD1 6 datasets
ChIP RD GSE137168.MYOD1.RD 297 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 191 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 734 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 209 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 182 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 161 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 587 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 224 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 236 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 314 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 312 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 224 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 252 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 294 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 64 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 423 bp overlap
NR2F2 5 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 209 bp overlap
ChIP liver ENCFF427MRU 421 bp overlap
ChIP liver ENCFF565JGD 209 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 443 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 239 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 277 bp overlap
PAF1 2 datasets
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 332 bp overlap
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 244 bp overlap
PBX3 1 dataset
ChIP A-549 ENCSR000BTN.PBX3.A-549 92 bp overlap
PGR 4 datasets
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 323 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 812 bp overlap
ChIP myometrium_TP1 GSE137550.PGR.myometrium_TP1 155 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 232 bp overlap
POLR2A 12 datasets
ChIP esophagus muscularis mucosa ENCFF432ZCY 465 bp overlap
ChIP esophagus muscularis mucosa ENCFF432ZCY 311 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 144 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 286 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 195 bp overlap
ChIP sigmoid colon ENCFF725QFT 282 bp overlap
ChIP sigmoid colon ENCFF748YVT 224 bp overlap
ChIP stomach ENCFF820WZN 185 bp overlap
ChIP transverse colon ENCFF607LKE 227 bp overlap
ChIP transverse colon ENCFF840PXT 321 bp overlap
ChIP upper lobe of left lung ENCFF095BJW 371 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 103 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 519 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 248 bp overlap
ChIP K562 ENCFF740YLK 169 bp overlap
RAD21 3 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 144 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap
ChIP liver ENCFF522JHE 401 bp overlap
RCOR1 2 datasets
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 238 bp overlap
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 194 bp overlap
RELA 6 datasets
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 235 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 362 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 172 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 248 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 143 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 257 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 172 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 187 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 234 bp overlap
ChIP liver ENCFF807CIA 266 bp overlap
SAFB2 1 dataset
ChIP Hep-G2 GSE120104.SAFB2.Hep-G2 221 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 707 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 785 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 724 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 680 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 719 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 625 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 595 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 260 bp overlap
SMAD3 2 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 135 bp overlap
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 187 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 491 bp overlap
SMARCA4 6 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 231 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 423 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 769 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 237 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 708 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 820 bp overlap
SMARCB1 3 datasets
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 298 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 284 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 307 bp overlap
SMARCC1 6 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 277 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 466 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 209 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 585 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 689 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 227 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 318 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 144 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 346 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 245 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 511 bp overlap
SSRP1 1 dataset
ChIP hiF-T GSE98758.SSRP1.hiF-T 266 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 165 bp overlap
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 208 bp overlap
SUPT5H 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 291 bp overlap
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 242 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 182 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 144 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 366 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 160 bp overlap
ChIP adipocyte GSE140782.TEAD1.adipocyte 390 bp overlap
TEAD4 3 datasets
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 311 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 513 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 211 bp overlap
TERF1 1 dataset
ChIP HepG2 ENCFF688CIB 183 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 227 bp overlap
USF2 1 dataset
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 143 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 302 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 153 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 183 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 224 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 206 bp overlap
ZNF7 2 datasets
ChIP HepG2 ENCFF983XQI 281 bp overlap
ChIP K562 ENCFF096OHS 381 bp overlap