chr14 : 79,281,306 79,282,562
1,256 bp 92 TFs 1 linked gene
This 1.3 kb open chromatin element is linked to NRXN3 and is bound by 92 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NRXN3 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:79,276,306 – 79,287,562
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
AR 4 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 108 bp overlap
ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 133 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 169 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 139 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 698 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 228 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 329 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 182 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 136 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 331 bp overlap
DAXX 1 dataset
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 240 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 152 bp overlap
ChIP hESC GSE26097.EOMES.hESC 250 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 296 bp overlap
EZH2 8 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 286 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 633 bp overlap
ChIP H1 ENCFF232NZA 834 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 179 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 274 bp overlap
ChIP fibroblast of lung ENCFF479BAW 367 bp overlap
ChIP fibroblast of lung ENCFF479BAW 605 bp overlap
ChIP neural progenitor cell ENCFF018MKA 845 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 754 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 1256 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 543 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 751 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 147 bp overlap
GATA3 1 dataset
ChIP Kelly GSE94822.GATA3.Kelly 166 bp overlap
GATA4 10 datasets
ChIP DE DE-GATA4-1 516 bp overlap
ChIP DE DE-GATA4-1 323 bp overlap
ChIP DE DE-GATA4-2 162 bp overlap
ChIP DE DE-GATA4-2 675 bp overlap
ChIP foregut GSE117136.GATA4.foregut 507 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 138 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 299 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 203 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 359 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 205 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 348 bp overlap
ChIP DE DE-GATA6-1 316 bp overlap
ChIP DE DE-GATA6-2 677 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 894 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 827 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 883 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 98 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 905 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1122 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 934 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 295 bp overlap
ChIP foregut GSE117136.GATA6.foregut 285 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 283 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 256 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 211 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 289 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 297 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 378 bp overlap
HOXB13 2 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 83 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 351 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 697 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 397 bp overlap
KLF5 2 datasets
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 349 bp overlap
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 238 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 170 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 421 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 519 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 892 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 303 bp overlap
ChIP hESC GSE18292.NANOG.hESC 157 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 242 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 218 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 600 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 165 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 159 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 323 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 319 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 309 bp overlap
PKNOX1 3 datasets
ChIP HEK293T ENCFF174WDB 212 bp overlap
ChIP HEK293T ENCFF174WDB 215 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 732 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 691 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 550 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 463 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 364 bp overlap
PRDM14 1 dataset
ChIP hESC GSE138674.PRDM14.hESC 207 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 267 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 722 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 236 bp overlap
Prdm14 1 dataset
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 167 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 174 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 119 bp overlap
ChIP neural ENCSR000BTV.REST.neural 122 bp overlap
RNF2 6 datasets
ChIP WA09 GSE105028.RNF2.WA09 187 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 256 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 457 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 311 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 188 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 494 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 521 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 194 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 214 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 258 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 766 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 877 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 272 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 254 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 409 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 470 bp overlap
SMARCA4 3 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 270 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 745 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 434 bp overlap
SMARCB1 3 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 87 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 368 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 170 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 283 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 572 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 375 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 180 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 159 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 219 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 268 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 227 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 254 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 242 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 144 bp overlap
TCF7L2 1 dataset
ChIP HEK293 ENCFF513JQN 505 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 205 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 671 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 376 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 210 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 743 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 823 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 379 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 459 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 548 bp overlap
ZFP3 2 datasets
ChIP HEK293 ENCFF345CRU 350 bp overlap
ChIP HEK293 ENCSR134QIE.ZFP3.HEK293 277 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 178 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 410 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 313 bp overlap
ZNF121 1 dataset
ChIP HEK293 GSE76494.ZNF121.HEK293 211 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 441 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 559 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 501 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 275 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 272 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 137 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 762 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 260 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 131 bp overlap
ZNF35 2 datasets
ChIP HEK293 GSE76494.ZNF35.HEK293 148 bp overlap
ChIP HEK293 GSE76494.ZNF35.HEK293 145 bp overlap
ZNF350 1 dataset
ChIP HEK293 GSE76494.ZNF350.HEK293 227 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 203 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 126 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 1256 bp overlap
ZNF695 1 dataset
ChIP HEK293T GSE78099.ZNF695.HEK293T 93 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 84 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 188 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 548 bp overlap
ZNF85 1 dataset
ChIP HEK293 GSE76494.ZNF85.HEK293 165 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 172 bp overlap
ZXDB 3 datasets
ChIP HEK293 ENCFF835SGA 399 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 745 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 359 bp overlap