chr14 : 48,561,342 – 48,561,789
447 bp 104 TFs 0 linked genes
This 447 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:48,556,342 – 48,566,789
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
AR 2 datasets
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 109 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 147 bp overlap
ARID1A 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 328 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 251 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 366 bp overlap
ATF2 1 dataset
ChIP H1 ENCFF295GZO 447 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
CEBPB 1 dataset
ChIP MCF-7 ENCFF772ZTQ 277 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCFF969VBY 364 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCFF712EXQ 144 bp overlap
EP300 1 dataset
ChIP H1 ENCFF927IYK 238 bp overlap
ESR1 6 datasets
ChIP MCF-7 ENCFF004AKH 359 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 85 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 194 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 356 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 231 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 294 bp overlap
ETS1 1 dataset
ChIP GM23338 ENCFF701IZH 322 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 447 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOXA1 26 datasets
ChIP MCF-7 ENCFF465LTH 386 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 134 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 184 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 175 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 270 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 184 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 185 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 193 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 237 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 275 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 247 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 161 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 175 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 181 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 137 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 296 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 182 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 200 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 226 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 228 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 226 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 265 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 255 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 334 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 217 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 300 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 447 bp overlap
ChIP DE DE-FOXA2-2 447 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 306 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCFF485YIB 301 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF352QVM 335 bp overlap
ChIP MCF-7 ENCFF437NQS 231 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 159 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 270 bp overlap
ChIP DE DE-GATA4-2 322 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 278 bp overlap
ChIP DE DE-GATA6-2 283 bp overlap
GCM1 1 dataset
Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap
GRHL2 2 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 291 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 169 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCFF881POI 360 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HNF4A 2 datasets
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_12h DE_12h-Hoxd13_MA0909.4 7 bp overlap
JUND 1 dataset
ChIP H1 ENCFF468JZD 230 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 131 bp overlap
MBD2 1 dataset
ChIP MCF-7 ENCFF757JNN 316 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Mecom 1 dataset
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
NANOG 2 datasets
ChIP H1 ENCFF747ZPQ 199 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 96 bp overlap
NEUROD1 1 dataset
ChIP MCF-7 ENCFF232JNU 331 bp overlap
NR1H2::RXRA 1 dataset
Motif DE_12h DE_12h-NR1H2RXRA_MA0115.1 17 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCFF329FZB 174 bp overlap
NR3C1 1 dataset
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 87 bp overlap
NR4A1 2 datasets
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
NR4A2 2 datasets
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 106 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 110 bp overlap
Nr1h3::Rxra 1 dataset
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 2 datasets
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 230 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 332 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 386 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
PPARA::RXRA 2 datasets
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Pparg::Rxra 3 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
RAD21 1 dataset
ChIP MCF-7 ENCFF724VCQ 199 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
RARA::RXRG 1 dataset
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 4 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 317 bp overlap
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 152 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 268 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 90 bp overlap
RXRA 1 dataset
ChIP H1 ENCFF570NHK 170 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCFF521RDC 224 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 201 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 242 bp overlap
SMARCE1 1 dataset
ChIP MCF-7 ENCFF890MHF 277 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 235 bp overlap
STAT3 13 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 190 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 349 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 380 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 428 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 389 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 303 bp overlap
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 195 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 256 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 270 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 409 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 349 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 299 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 309 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 207 bp overlap
ChIP MCF-7 ENCFF329MRX 417 bp overlap
TCF7L2 2 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 239 bp overlap
TEAD1 2 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
ChIP WTC11 ENCFF502QUV 308 bp overlap
TEAD4 5 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP MCF-7 ENCFF710WPA 305 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 225 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 217 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 4 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 215 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 243 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
THRA 1 dataset
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 65 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 104 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 276 bp overlap
YY1AP1 3 datasets
ChIP MCF-7_E2 GSE125594.YY1AP1.MCF-7_E2 242 bp overlap
ChIP MCF-7_Veh GSE125594.YY1AP1.MCF-7_Veh 298 bp overlap
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 254 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF35 2 datasets
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 251 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 280 bp overlap
Zic2 3 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
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