chr1 : 211,257,043 – 211,257,661
618 bp 104 TFs 1 linked gene
This 618 bp open chromatin element is linked to RCOR3 and is bound by 104 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RCOR3 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:211,252,043 – 211,262,661
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 176 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 329 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 55 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 306 bp overlap
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 355 bp overlap
ASH2L 2 datasets
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 528 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 452 bp overlap
ATF2 3 datasets
ChIP H1 ENCFF295GZO 541 bp overlap
ChIP H1 ENCFF295GZO 293 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 257 bp overlap
BACH1 1 dataset
ChIP AsPC-1 GSE124406.BACH1.AsPC-1 180 bp overlap
BHLHE40 1 dataset
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 108 bp overlap
BRD2 2 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 244 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 215 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 276 bp overlap
BRD4 6 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 205 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 280 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 170 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 257 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 137 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 239 bp overlap
CEBPB 3 datasets
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP K562 ENCFF189VBN 271 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 204 bp overlap
CHD1 1 dataset
ChIP H1 ENCFF128BID 255 bp overlap
CHD2 1 dataset
ChIP K-562 ENCSR000EHD.CHD2.K-562 118 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 361 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 471 bp overlap
CTCF 1 dataset
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 410 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 277 bp overlap
ChIP BLaER1 ENCFF262VBH 251 bp overlap
ChIP BLaER1 ENCFF460KDD 157 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 262 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 159 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 415 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 194 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 190 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 427 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 244 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 351 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 133 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 237 bp overlap
ESR1 6 datasets
ChIP breast_tumor_Male_1 GSE104399.ESR1.breast_tumor_Male_1 318 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 259 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 355 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 300 bp overlap
ChIP breast_tumor_Male_20 GSE104399.ESR1.breast_tumor_Male_20 303 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 157 bp overlap
ETV5 1 dataset
ChIP K562 ENCFF336FFA 370 bp overlap
FOXA1 3 datasets
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 235 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 52 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 261 bp overlap
GATA4 1 dataset
ChIP Hep-G2 ENCSR590CNM.GATA4.Hep-G2 144 bp overlap
GMEB1 1 dataset
ChIP Hep-G2 ENCSR780OXL.GMEB1.Hep-G2 207 bp overlap
GRHL2 2 datasets
ChIP HBE GSE46194.GRHL2.HBE 186 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 181 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 199 bp overlap
HDGF 1 dataset
ChIP K562 ENCFF195BET 226 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-N 76 bp overlap
HOXB13 7 datasets
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 98 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 81 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 107 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 264 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 147 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 162 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 273 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 494 bp overlap
ChIP K562 ENCFF348IBL 127 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 152 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 111 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 200 bp overlap
MAFF 2 datasets
ChIP K-562 ENCSR000EGI.MAFF.K-562 85 bp overlap
ChIP K562 ENCFF071YKK 143 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 203 bp overlap
ChIP K562 ENCFF455EEO 240 bp overlap
MAFK 2 datasets
ChIP K-562 ENCSR000EGX.MAFK.K-562 105 bp overlap
ChIP K562 ENCFF380WHM 136 bp overlap
MAX 3 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 168 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 136 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 113 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 109 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 555 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR107GRP.MLLT1.K-562 531 bp overlap
ChIP K562 ENCFF074XRJ 197 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 502 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 193 bp overlap
MYPOP 1 dataset
ChIP HepG2 ENCFF176TQL 404 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 518 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 524 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 198 bp overlap
ChIP hESC GSE18292.NANOG.hESC 175 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 191 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 137 bp overlap
ChIP K562 ENCFF163BSI 77 bp overlap
NFE2L2 1 dataset
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 103 bp overlap
NFKBIZ 1 dataset
ChIP Hep-G2 ENCSR235OVI.NFKBIZ.Hep-G2 140 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 220 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 364 bp overlap
PAXIP1 1 dataset
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 429 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 58 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 152 bp overlap
PHF8 3 datasets
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 187 bp overlap
ChIP HepG2 ENCFF065NWR 402 bp overlap
ChIP K562 ENCFF217UCA 611 bp overlap
PKNOX1 1 dataset
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 155 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 491 bp overlap
ChIP GM23338 ENCFF450WCS 323 bp overlap
ChIP H1 ENCFF566JSR 227 bp overlap
POU5F1 6 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 470 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 320 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 224 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 549 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 613 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 176 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 125 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 420 bp overlap
PRDM10 2 datasets
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 281 bp overlap
ChIP K562 ENCFF740YLK 417 bp overlap
RAD21 1 dataset
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 320 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 283 bp overlap
RBFOX2 1 dataset
ChIP K-562 GSE120104.RBFOX2.K-562 164 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 230 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 448 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 380 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 171 bp overlap
SIN3A 1 dataset
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 95 bp overlap
SIX5 1 dataset
ChIP K562 ENCFF637NIL 105 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 265 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 281 bp overlap
SMARCA4 7 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 284 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 425 bp overlap
ChIP K562 ENCFF506JCB 324 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 214 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 237 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 497 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 236 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 521 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 216 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 343 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 212 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 195 bp overlap
ChIP hESC GSE18292.SOX2.hESC 111 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 410 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 425 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 295 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 63 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 369 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 386 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 141 bp overlap
TBP 4 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 150 bp overlap
ChIP hESC GSE122298.TBP.hESC 200 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 338 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 121 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 279 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF465AQA 89 bp overlap
TEAD4 3 datasets
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 250 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 286 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 144 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 301 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 265 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 350 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 160 bp overlap
ChIP K562 ENCFF875HLX 268 bp overlap
ZBTB43 1 dataset
ChIP K562 ENCFF722QWH 244 bp overlap
ZFP64 2 datasets
ChIP HEK293 GSE76494.ZFP64.HEK293 185 bp overlap
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 294 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 563 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 593 bp overlap
ZMYM3 1 dataset
ChIP HepG2 ENCFF408KTI 305 bp overlap
ZNF175 1 dataset
ChIP Hep-G2 ENCSR014RHK.ZNF175.Hep-G2 118 bp overlap
ZNF184 5 datasets
ChIP K-562 ENCSR621ATC.ZNF184.K-562 307 bp overlap
ChIP K-562 ENCSR546IHU.ZNF184.K-562 368 bp overlap
ChIP K562 ENCFF075YMN 225 bp overlap
ChIP K562 ENCFF579ZRD 377 bp overlap
ChIP WTC11 ENCFF352POG 497 bp overlap
ZNF217 1 dataset
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 222 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 75 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 532 bp overlap
ZNF512 2 datasets
ChIP K-562 ENCSR591CCL.ZNF512.K-562 438 bp overlap
ChIP K562 ENCFF601EMZ 301 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 242 bp overlap
ChIP K562 ENCFF547OSS 277 bp overlap
ZNF786 1 dataset
ChIP Hep-G2 ENCSR206BVQ.ZNF786.Hep-G2 218 bp overlap
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