chr12 : 11,827,224 11,827,806
582 bp 109 TFs 0 linked genes
This 582 bp open chromatin element has no linked target genes and is bound by 109 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:11,822,224 – 11,832,806
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 125 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 479 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 582 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 132 bp overlap
ATF2 2 datasets
ChIP WA01 ENCSR000BQU.ATF2.WA01 220 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 184 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 255 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 135 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 166 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 582 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 488 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 280 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 180 bp overlap
BRD4 7 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 138 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 241 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 216 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 582 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 180 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 232 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 187 bp overlap
CCAR2 1 dataset
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 177 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 83 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 196 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 331 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 360 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 88 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 99 bp overlap
CREBBP 1 dataset
ChIP monocyte_IFNg GSE131294.CREBBP.monocyte_IFNg 80 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 237 bp overlap
CTCF 4 datasets
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 253 bp overlap
ChIP artery_tibial ENCSR699BEK.CTCF.artery_tibial 184 bp overlap
ChIP thyroid gland ENCFF631QRY 207 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 194 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 123 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 114 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 321 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 213 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 258 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 301 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 188 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 207 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 374 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 160 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 418 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 247 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-2 484 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 483 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 371 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 532 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 438 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 515 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 541 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 342 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 162 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 120 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 270 bp overlap
IRF3 1 dataset
Motif DE_24h DE_24h-IRF3_MA1418.2 17 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 211 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 194 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 279 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 582 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 562 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 105 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 582 bp overlap
JUND 1 dataset
ChIP H1 ENCFF010YXS 311 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 179 bp overlap
MAFF 6 datasets
ChIP GM12878 ENCSR237YZZ.MAFF.GM12878 102 bp overlap
ChIP HeLa-S3 ENCFF783SBT 164 bp overlap
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 143 bp overlap
ChIP HepG2 ENCFF452YUT 95 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 225 bp overlap
ChIP K562 ENCFF071YKK 108 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 307 bp overlap
ChIP K562 ENCFF455EEO 229 bp overlap
MAFK 15 datasets
ChIP A549 ENCFF371EPR 216 bp overlap
ChIP GM12878 ENCFF605LFT 151 bp overlap
ChIP H1 ENCFF854XWE 113 bp overlap
ChIP HeLa-S3 ENCFF304XGR 150 bp overlap
ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 117 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF743ZOF 122 bp overlap
ChIP HepG2 ENCFF767LDG 165 bp overlap
ChIP IMR-90 ENCFF336DHZ 142 bp overlap
ChIP K-562 ENCSR000EGX.MAFK.K-562 204 bp overlap
ChIP K562 ENCFF380WHM 101 bp overlap
ChIP MCF-7 ENCFF558JLG 203 bp overlap
ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 193 bp overlap
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 287 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 390 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 102 bp overlap
MED1 9 datasets
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 278 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 132 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 94 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 90 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 124 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 104 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 56 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 135 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 63 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 261 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 202 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 122 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 569 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 259 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 143 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 206 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 306 bp overlap
NFE2 5 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 138 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 130 bp overlap
ChIP K562 ENCFF047YKA 252 bp overlap
ChIP K562 ENCFF163BSI 176 bp overlap
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 65 bp overlap
NR1I3 1 dataset
Motif DE_24h DE_24h-NR1I3_MA1534.2 8 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
NR3C1 1 dataset
ChIP hMSC_DMI GSE68864.NR3C1.hMSC_DMI 73 bp overlap
Nr2f6 1 dataset
Motif DE_24h DE_24h-Nr2f6_MA0677.2 13 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 221 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 238 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 80 bp overlap
POLR2A 2 datasets
ChIP spleen ENCFF044PYR 156 bp overlap
ChIP thyroid gland ENCFF979LRR 395 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
Motif DE_24h DE_24h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 582 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 582 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 146 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 481 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 169 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 169 bp overlap
RAD21 2 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 162 bp overlap
ChIP MDM_-dNS1 GSE103477.RAD21.MDM_-dNS1 168 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 316 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 209 bp overlap
RXRB 1 dataset
Motif DE_24h DE_24h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_24h DE_24h-RXRG_MA0856.1 14 bp overlap
Rxra 1 dataset
Motif DE_24h DE_24h-Rxra_MA0512.2 14 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 207 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 176 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 361 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 500 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 554 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 351 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 483 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 554 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 481 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 492 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 201 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 167 bp overlap
SMARCA2 1 dataset
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 363 bp overlap
SMARCA4 6 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 132 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 72 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 134 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 231 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 556 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 465 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 283 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 572 bp overlap
SMC1A 2 datasets
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 123 bp overlap
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 131 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 239 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 233 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 259 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 266 bp overlap
SREBP2 3 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 198 bp overlap
ChIP monocyte GSE129202.SREBP2.monocyte 57 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 582 bp overlap
STAT1 3 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 124 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 112 bp overlap
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 118 bp overlap
STAT3 1 dataset
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 112 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 321 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 151 bp overlap
TEAD1 2 datasets
ChIP adipocyte GSE140782.TEAD1.adipocyte 210 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 164 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 171 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 156 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 225 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 231 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 535 bp overlap
ChIP K-562 GSE121133.ZNF148.K-562 259 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 263 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ChIP K-562 GSE121133.ZNF281.K-562 234 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 289 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 158 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 108 bp overlap