chr8 : 118,958,964 118,959,392
428 bp 106 TFs 1 linked gene
This 428 bp open chromatin element is linked to TNFRSF11B and is bound by 106 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TNFRSF11B 7.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:118,953,964 – 118,964,392
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
ARNTL 4 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 331 bp overlap
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 107 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 331 bp overlap
ChIP U2OS_cordycepin GSE130506.ARNTL.U2OS_cordycepin 236 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 428 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 312 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 376 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 324 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 56 bp overlap
BATF3 1 dataset
ChIP GM12878 GSE97661.BATF3.GM12878 170 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 229 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 414 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34pos GSE84677.BCL11B.thymus_CD34pos 161 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 220 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF521IZR 299 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 236 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 318 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 352 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 247 bp overlap
BRD4 12 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 108 bp overlap
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 425 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 230 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 245 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 368 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 224 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 249 bp overlap
ChIP MV4-11_IBET_SGC GSE71776.BRD4.MV4-11_IBET_SGC 222 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 363 bp overlap
ChIP SEM GSE83671.BRD4.SEM 247 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 428 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 428 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 330 bp overlap
CBX5 2 datasets
ChIP GM12878 ENCFF542UDC 398 bp overlap
ChIP GM12878 ENCFF542UDC 289 bp overlap
CDK9 3 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 330 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 256 bp overlap
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 177 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 162 bp overlap
CEBPB 1 dataset
ChIP GM12878 ENCSR000BRX.CEBPB.GM12878 153 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 221 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 346 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCFF870CVH 181 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 63 bp overlap
CREM 2 datasets
ChIP GM12878 ENCFF391UGE 325 bp overlap
ChIP GM12878 ENCSR839XZU.CREM.GM12878 250 bp overlap
CRY1 1 dataset
ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 291 bp overlap
CRY2 1 dataset
ChIP U2OS GSE130602.CRY2.U2OS 313 bp overlap
DPF2 3 datasets
ChIP GM12878 ENCFF681AJV 366 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 428 bp overlap
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 204 bp overlap
DRAP1 1 dataset
ChIP GM12878 GSE97661.DRAP1.GM12878 328 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 337 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF167CZS 303 bp overlap
ChIP GM12878 ENCFF813OXE 215 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 115 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 248 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 251 bp overlap
EP300 4 datasets
ChIP GM12878 ENCFF039QRE 255 bp overlap
ChIP GM12878 ENCFF242HCG 307 bp overlap
ChIP GM12878 ENCSR000DZG.EP300.GM12878 259 bp overlap
ChIP GM12878 ENCSR000DZD.EP300.GM12878 213 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 126 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 150 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 312 bp overlap
ETV6 2 datasets
ChIP GM12878 GSE97661.ETV6.GM12878 329 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 392 bp overlap
FLI1 2 datasets
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 266 bp overlap
ChIP SEM GSE117864.FLI1.SEM 257 bp overlap
FOXA1 2 datasets
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 108 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 260 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 428 bp overlap
ChIP DE DE-FOXA2-2 418 bp overlap
ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 221 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 428 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 343 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 195 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 428 bp overlap
ChIP DE DE-GATA4-2 426 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 405 bp overlap
ChIP DE DE-GATA6-2 428 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 428 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 428 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 399 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 302 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 428 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 428 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 428 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 370 bp overlap
HIF1A 2 datasets
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 193 bp overlap
ChIP U2OS_trough_DMSO GSE85096.HIF1A.U2OS_trough_DMSO 237 bp overlap
IKZF1 6 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 308 bp overlap
ChIP GM12878 ENCFF616FJX 428 bp overlap
ChIP GM12878 ENCFF616FJX 372 bp overlap
ChIP GM12878 ENCFF753XDO 428 bp overlap
ChIP GM12878 ENCFF824TGK 428 bp overlap
ChIP GM12878 ENCSR000EUJ.IKZF1.GM12878 270 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 412 bp overlap
ChIP GM12878 ENCFF918AID 416 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 428 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 428 bp overlap
IRF4 2 datasets
ChIP B-cell GSE142493.IRF4.B-cell 192 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 421 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 310 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 402 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 326 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 428 bp overlap
ChIP MCF-7_E2 GSE102410.JUN.MCF-7_E2 128 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.JUN.MCF-7_Tamoxifen 166 bp overlap
JUNB 3 datasets
ChIP GM12878 ENCFF667EJQ 233 bp overlap
ChIP GM12878 ENCFF667EJQ 427 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 408 bp overlap
KDM1A 2 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 265 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 228 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 428 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 398 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 321 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 278 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 381 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 173 bp overlap
MEF2A 2 datasets
ChIP GM12878 ENCFF652BHX 288 bp overlap
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 314 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 392 bp overlap
MLLT1 3 datasets
ChIP GM12878 ENCFF995GXC 195 bp overlap
ChIP GM12878 ENCFF995GXC 331 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 418 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 411 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 428 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 287 bp overlap
MYB 2 datasets
ChIP MOLT-3 GSE59657.MYB.MOLT-3 178 bp overlap
ChIP SEM GSE117864.MYB.SEM 302 bp overlap
MYOD1 2 datasets
ChIP myoblast GSE50413.MYOD1.myoblast 77 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 72 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 255 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 428 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 280 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 399 bp overlap
ChIP hESC GSE18292.NANOG.hESC 128 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 286 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 428 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 428 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 420 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 163 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 428 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 257 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 263 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 231 bp overlap
NR3C1 3 datasets
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 307 bp overlap
ChIP GM12878 ENCSR904YPP.NR3C1.GM12878 216 bp overlap
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 221 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCFF503GOV 179 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 362 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 176 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 422 bp overlap
PML 1 dataset
ChIP GM12878 ENCSR000BQM.PML.GM12878 147 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 390 bp overlap
RAD21 2 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 158 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 173 bp overlap
RELA 6 datasets
ChIP GM12878 ENCFF513IEN 311 bp overlap
ChIP GM12878 ENCSR000EAG.RELA.GM12878 346 bp overlap
ChIP GM12878 ENCSR664POU.RELA.GM12878 261 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 215 bp overlap
ChIP GM19099 ENCSR000EBI.RELA.GM19099 161 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 412 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 428 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 428 bp overlap
RUNX1 4 datasets
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 379 bp overlap
ChIP Kasumi-1 GSE45738.RUNX1.Kasumi-1 390 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 362 bp overlap
ChIP NALM-6 GSE109377.RUNX1.NALM-6 260 bp overlap
RUNX1T1 3 datasets
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 205 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 236 bp overlap
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 178 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 412 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 251 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 413 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 428 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 412 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 261 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 325 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 278 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 246 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 363 bp overlap
SMARCC1 2 datasets
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 305 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 316 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 213 bp overlap
SOX2 6 datasets
ChIP HNSC GSE69479.SOX2.HNSC 234 bp overlap
ChIP LK2 GSE137459.SOX2.LK2 354 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 428 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 428 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 428 bp overlap
ChIP hESC GSE18292.SOX2.hESC 97 bp overlap
SP1 2 datasets
ChIP GM12878 ENCFF620LDJ 234 bp overlap
ChIP GM12878 ENCSR000BHK.SP1.GM12878 200 bp overlap
SPI1 12 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 190 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 313 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 276 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 242 bp overlap
ChIP GM12878 ENCFF134LCP 144 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 186 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 256 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 265 bp overlap
ChIP RS4-11 GSE71616.SPI1.RS4-11 261 bp overlap
ChIP RS4-11_DEX GSE71616.SPI1.RS4-11_DEX 316 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 237 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 256 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 368 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 428 bp overlap
TBL1XR1 1 dataset
ChIP GM12878 ENCFF409FTM 282 bp overlap
TBX21 3 datasets
ChIP GM12878 ENCFF951HUW 400 bp overlap
ChIP GM12878 ENCFF951HUW 428 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 428 bp overlap
TCF12 4 datasets
ChIP GM12878 ENCFF433DMU 100 bp overlap
ChIP GM12878 ENCFF506WWB 128 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 290 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 221 bp overlap
TCF3 2 datasets
ChIP NPC GSE154479.TCF3.NPC 424 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 417 bp overlap
TCF7 2 datasets
ChIP GM12878 ENCFF749DPM 181 bp overlap
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 380 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 276 bp overlap
TP53 3 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 358 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 391 bp overlap
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 124 bp overlap
TRIM22 3 datasets
ChIP GM12878 ENCFF919OMX 388 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 428 bp overlap
ChIP GM12878 ENCSR637QAM.TRIM22.GM12878 311 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCSR207PFI.ZBED1.GM12878 307 bp overlap
ZNF384 1 dataset
ChIP GM12878 ENCFF229VSP 319 bp overlap
ZNF597 1 dataset
ChIP GM12878 GSE97661.ZNF597.GM12878 148 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 339 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 204 bp overlap
ZSCAN29 2 datasets
ChIP GM12878 ENCFF983OKU 189 bp overlap
ChIP GM12878 ENCFF983OKU 130 bp overlap