chr7 : 26,948,678 – 26,949,133
455 bp 88 TFs 1 linked gene
This 455 bp open chromatin element is linked to SKAP2 and is bound by 88 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SKAP2 84.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:26,943,678 – 26,954,133
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 320 bp overlap
ARID1B 1 dataset
ChIP Hep-G2 GSE69566.ARID1B.Hep-G2 106 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 455 bp overlap
ChIP H1 ENCFF399KAM 453 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 424 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 424 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 455 bp overlap
BCL11A 2 datasets
ChIP WA01 ENCSR000BIP.BCL11A.WA01 159 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 119 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 152 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 305 bp overlap
BRD2 1 dataset
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 274 bp overlap
BRD4 5 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 244 bp overlap
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 200 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 298 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 325 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 267 bp overlap
CHD4 1 dataset
ChIP HaCaT GSE139685.CHD4.HaCaT 316 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 157 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 252 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 231 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 161 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 153 bp overlap
CREBBP 2 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 328 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 455 bp overlap
CREM 1 dataset
ChIP Hep-G2 ENCSR903ELW.CREM.Hep-G2 91 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 243 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 187 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 343 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 242 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 286 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 57 bp overlap
FOXA1 2 datasets
ChIP T47D-A1-2_Dex GSE112491.FOXA1.T47D-A1-2_Dex 185 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 425 bp overlap
FOXA2 3 datasets
ChIP KerCT GSE90454.FOXA2.KerCT 353 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 271 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 335 bp overlap
FOXO4 1 dataset
ChIP HepG2 ENCFF909ISL 186 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 161 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 358 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GATA2 1 dataset
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 119 bp overlap
GATA4 2 datasets
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 436 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 455 bp overlap
GATA6 5 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 245 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 261 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 333 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 263 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 154 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 349 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 274 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF750ZWM 121 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 425 bp overlap
ChIP H1 ENCFF939VKA 223 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 265 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 140 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 455 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 455 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 455 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 416 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 455 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 455 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 455 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 455 bp overlap
JUND 3 datasets
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 401 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 181 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 179 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 349 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 226 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 151 bp overlap
ChIP GM23338 ENCFF065NZG 263 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 455 bp overlap
ChIP H1 ENCFF747ZPQ 222 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 455 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 455 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 263 bp overlap
ChIP hESC GSE20650.NANOG.hESC 316 bp overlap
ChIP hESC GSE18292.NANOG.hESC 166 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 185 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 53 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 237 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 74 bp overlap
ONECUT1 3 datasets
ChIP H9 ERP004206.ONECUT1.H9 228 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 89 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 455 bp overlap
ONECUT2 1 dataset
ChIP A-549 GSE102599.ONECUT2.A-549 106 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 312 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 195 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 407 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 395 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 386 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 303 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 162 bp overlap
POU5F1 15 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 196 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 455 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 304 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 455 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 204 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 205 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 454 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 302 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 254 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 455 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 455 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 297 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 451 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 455 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 447 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 414 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 455 bp overlap
RARA 4 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 196 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 313 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 455 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 351 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 259 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 214 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 359 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 165 bp overlap
RELA 6 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 232 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 167 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 253 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 234 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 226 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 357 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 139 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 162 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 269 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 448 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 316 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 178 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 263 bp overlap
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 210 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15690 GSE132290.SMARCA4.A-549_AG15690 300 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 255 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 229 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 407 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 455 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 455 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 455 bp overlap
SMARCC1 6 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 348 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 372 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 455 bp overlap
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 79 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 455 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 455 bp overlap
SMC1 1 dataset
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 365 bp overlap
SMC1A 2 datasets
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 342 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 247 bp overlap
SOX2 9 datasets
ChIP H9 GSE46837.SOX2.H9 204 bp overlap
ChIP HCC95 GSE137459.SOX2.HCC95 448 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 157 bp overlap
ChIP KNS-62 GSE137459.SOX2.KNS-62 135 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 157 bp overlap
ChIP hESC GSE69479.SOX2.hESC 286 bp overlap
ChIP hESC GSE18292.SOX2.hESC 102 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 373 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 324 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 185 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 282 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 455 bp overlap
STAG1 1 dataset
ChIP HMEC-1 GSE101921.STAG1.HMEC-1 158 bp overlap
STAG2 1 dataset
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 342 bp overlap
STAT1 2 datasets
ChIP FaDu_BB608 GSE78212.STAT1.FaDu_BB608 233 bp overlap
ChIP FaDu_DMSO GSE78212.STAT1.FaDu_DMSO 255 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 254 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 170 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 260 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 204 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 201 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 455 bp overlap
TEAD1 3 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 87 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 434 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 161 bp overlap
TEAD4 6 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 455 bp overlap
ChIP H1 ENCFF778PAX 111 bp overlap
ChIP H1 ENCFF778PAX 219 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 395 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 274 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 314 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 130 bp overlap
TP53 14 datasets
ChIP H9 GSE142050.TP53.H9 279 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 447 bp overlap
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 455 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP53.MCF-10A_Nutlin3A 281 bp overlap
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 188 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 117 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 258 bp overlap
ChIP SaOS-2 GSE51268.TP53.SaOS-2 215 bp overlap
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 236 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 283 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 315 bp overlap
ChIP keratinocyte GSE56674.TP53.keratinocyte 160 bp overlap
ChIP keratinocyte_ADRIA GSE56674.TP53.keratinocyte_ADRIA 131 bp overlap
ChIP keratinocyte_CISP GSE56674.TP53.keratinocyte_CISP 305 bp overlap
TP63 16 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 410 bp overlap
ChIP HaCaT_LacZ GSE60814.TP63.HaCaT_LacZ 178 bp overlap
ChIP HaCaT_LacZ_TGFB GSE60814.TP63.HaCaT_LacZ_TGFB 409 bp overlap
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 438 bp overlap
ChIP HaCaT_dnRAS_TGFB GSE60814.TP63.HaCaT_dnRAS_TGFB 263 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 362 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 455 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 443 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 364 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 323 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 379 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 329 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 326 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 334 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 318 bp overlap
ChIP keratinocyte_epidermal_KDPAF GSE67382.TP63.keratinocyte_epidermal_KDPAF 293 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 246 bp overlap
TWIST1 2 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 200 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 193 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 243 bp overlap
YY1AP1 3 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 270 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 283 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 165 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 433 bp overlap
ZNF384 1 dataset
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 110 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 219 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 239 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 288 bp overlap
ZNF879 1 dataset
ChIP HepG2 ENCFF479BKR 233 bp overlap
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