chr1 : 86,409,431 86,410,362
931 bp 123 TFs 0 linked genes
This 931 bp open chromatin element has no linked target genes and is bound by 123 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:86,404,431 – 86,415,362
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
123 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 237 bp overlap
BACH1 1 dataset
ChIP K562 ENCFF419VIM 604 bp overlap
BCL6 2 datasets
Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap
Motif DE_72h DE_72h-BCL6_MA0463.3 13 bp overlap
BHLHE40 2 datasets
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 127 bp overlap
ChIP K562 ENCFF923NJI 311 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 313 bp overlap
BRD4 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 278 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 289 bp overlap
ChIP K562 ENCFF963TXY 381 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 243 bp overlap
CREB3 2 datasets
ChIP K-562 ENCSR093FKD.CREB3.K-562 263 bp overlap
ChIP K562 ENCFF985QJI 295 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 416 bp overlap
CUX1 1 dataset
Motif DE_12h DE_12h-CUX1_MA0754.3 9 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 493 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 353 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 316 bp overlap
DPF1 1 dataset
ChIP K-562 GSE97661.DPF1.K-562 190 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 316 bp overlap
ChIP K562 ENCFF775HUO 438 bp overlap
E2F6 1 dataset
ChIP K-562 ENCSR000BLI.E2F6.K-562 92 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 375 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF200OMJ 311 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 410 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 133 bp overlap
EP300 1 dataset
ChIP upper lobe of left lung ENCFF024QBJ 261 bp overlap
FEZF2 4 datasets
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 225 bp overlap
ChIP K562 ENCFF455MKD 551 bp overlap
FOSL2 2 datasets
ChIP HepG2 ENCFF548CXY 205 bp overlap
ChIP HepG2 ENCFF796NIA 257 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 385 bp overlap
FOXK2 1 dataset
ChIP K562 ENCFF851PFH 457 bp overlap
GATA1::TAL1 2 datasets
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 516 bp overlap
ChIP DE DE-GATA4-2 538 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 475 bp overlap
ChIP DE DE-GATA6-2 523 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 563 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 500 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 493 bp overlap
GLIS2 4 datasets
Motif DE_36h DE_36h-GLIS2_MA0736.1 14 bp overlap
Motif DE_48h DE_48h-GLIS2_MA0736.1 14 bp overlap
Motif DE_60h DE_60h-GLIS2_MA0736.1 14 bp overlap
Motif DE_72h DE_72h-GLIS2_MA0736.1 14 bp overlap
GLIS3 4 datasets
Motif DE_36h DE_36h-GLIS3_MA0737.1 14 bp overlap
Motif DE_48h DE_48h-GLIS3_MA0737.1 14 bp overlap
Motif DE_60h DE_60h-GLIS3_MA0737.1 14 bp overlap
Motif DE_72h DE_72h-GLIS3_MA0737.1 14 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF4A 2 datasets
ChIP IM95 GSE114018.HNF4A.IM95 243 bp overlap
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 199 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 237 bp overlap
Hic1 4 datasets
Motif DE_36h DE_36h-Hic1_MA0739.2 8 bp overlap
Motif DE_48h DE_48h-Hic1_MA0739.2 8 bp overlap
Motif DE_60h DE_60h-Hic1_MA0739.2 8 bp overlap
Motif DE_72h DE_72h-Hic1_MA0739.2 8 bp overlap
INSM1 2 datasets
Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap
Motif DE_72h DE_72h-INSM1_MA0155.1 12 bp overlap
JUNB 2 datasets
ChIP K-562 ENCSR000DJY.JUNB.K-562 159 bp overlap
ChIP K562 ENCFF388SEP 346 bp overlap
JUND 3 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 156 bp overlap
ChIP K562 ENCFF336RCR 411 bp overlap
ChIP K562 ENCFF830LVJ 281 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF6 1 dataset
ChIP K-562 ENCSR297CGF.KLF6.K-562 211 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 353 bp overlap
ChIP K562 ENCFF320EQC 467 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 313 bp overlap
ChIP K562 ENCFF455EEO 380 bp overlap
MAX 7 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 196 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 229 bp overlap
ChIP K562 ENCFF110LJS 94 bp overlap
ChIP K562 ENCFF524IJO 103 bp overlap
ChIP NB4 ENCFF966MWB 277 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 305 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 318 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 249 bp overlap
MEIS1 2 datasets
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 266 bp overlap
ChIP K562 ENCFF140CEX 456 bp overlap
MITF 7 datasets
ChIP 501-mel GSE137522.MITF.501-mel 367 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 179 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 378 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 365 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 377 bp overlap
ChIP K562 ENCFF731XJJ 254 bp overlap
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 213 bp overlap
MNT 1 dataset
ChIP K-562 ENCSR512NLO.MNT.K-562 246 bp overlap
MYB 4 datasets
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
Motif DE_72h DE_72h-MYB_MA0100.4 6 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 292 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 299 bp overlap
MYOD1 2 datasets
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 140 bp overlap
NFE2 4 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 238 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 150 bp overlap
ChIP K562 ENCFF047YKA 360 bp overlap
ChIP K562 ENCFF163BSI 265 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 312 bp overlap
NHLH2 1 dataset
Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 284 bp overlap
NR2C1 2 datasets
ChIP K-562 ENCSR178DEG.NR2C1.K-562 275 bp overlap
ChIP K562 ENCFF568JLK 379 bp overlap
NR4A1 2 datasets
ChIP K-562 ENCSR130PDE.NR4A1.K-562 304 bp overlap
ChIP K562 ENCFF998LHF 427 bp overlap
NRF1 2 datasets
ChIP K-562 ENCSR998AJK.NRF1.K-562 298 bp overlap
ChIP K562 ENCFF689EWI 482 bp overlap
NRL 2 datasets
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
Motif DE_72h DE_72h-NRL_MA0842.3 12 bp overlap
PBX3 2 datasets
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
Motif DE_72h DE_72h-PBX3_MA1114.2 11 bp overlap
PKNOX1 2 datasets
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_72h DE_72h-PKNOX1_MA0782.3 10 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 325 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF199JUI 350 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap
RAD51 4 datasets
ChIP Hep-G2 ENCSR081WLS.RAD51.Hep-G2 278 bp overlap
ChIP HepG2 ENCFF188FEZ 365 bp overlap
ChIP K-562 ENCSR524BUE.RAD51.K-562 443 bp overlap
ChIP K562 ENCFF133ELP 380 bp overlap
RELB 4 datasets
Motif DE_36h DE_36h-RELB_MA1117.2 7 bp overlap
Motif DE_48h DE_48h-RELB_MA1117.2 7 bp overlap
Motif DE_60h DE_60h-RELB_MA1117.2 7 bp overlap
Motif DE_72h DE_72h-RELB_MA1117.2 7 bp overlap
REST 2 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 200 bp overlap
ChIP K562 ENCFF688UKW 411 bp overlap
Rhox11 2 datasets
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
Motif DE_72h DE_72h-Rhox11_MA0629.2 9 bp overlap
SHOX2 1 dataset
ChIP K-562 ENCSR184IQF.SHOX2.K-562 230 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 342 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 433 bp overlap
SMAD4 2 datasets
ChIP K562 ENCFF628RBP 460 bp overlap
ChIP K562 ENCFF628RBP 541 bp overlap
SNAI2 1 dataset
Motif DE_60h DE_60h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 382 bp overlap
SOX18 1 dataset
Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap
SOX8 1 dataset
Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 399 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 282 bp overlap
TCF4 1 dataset
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
TEAD1 1 dataset
ChIP K-562 ENCSR591ASD.TEAD1.K-562 200 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 200 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 317 bp overlap
TOE1 1 dataset
ChIP K562 ENCFF728FRA 528 bp overlap
TRIM24 3 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 238 bp overlap
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 317 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 293 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF582MWI 495 bp overlap
ChIP HEK293 ENCFF582MWI 671 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 167 bp overlap
Tfcp2l1 3 datasets
Motif DE_48h DE_48h-Tfcp2l1_MA0145.2 14 bp overlap
Motif DE_60h DE_60h-Tfcp2l1_MA0145.2 14 bp overlap
Motif DE_72h DE_72h-Tfcp2l1_MA0145.2 14 bp overlap
USF1 12 datasets
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 167 bp overlap
ChIP HepG2 ENCFF201JKA 208 bp overlap
ChIP HepG2 ENCFF807KYJ 201 bp overlap
ChIP Ishikawa ENCFF728IEG 261 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 152 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 334 bp overlap
ChIP K562 ENCFF202SFC 223 bp overlap
ChIP K562 ENCFF633EZB 223 bp overlap
ChIP SK-N-SH ENCFF967PDP 311 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 220 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 138 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 134 bp overlap
USF2 14 datasets
ChIP GM12878 GSE97661.USF2.GM12878 222 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 353 bp overlap
ChIP Hep-G2 ENCSR000EEF.USF2.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF433IUE 577 bp overlap
ChIP HepG2 ENCFF671JRC 265 bp overlap
ChIP IMR-90 ENCFF438KUN 257 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 127 bp overlap
ChIP K-562 ENCSR359NFW.USF2.K-562 341 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 262 bp overlap
ChIP K-562 ENCSR000EHG.USF2.K-562 125 bp overlap
ChIP K562 ENCFF306QPU 264 bp overlap
ChIP K562 ENCFF306QPU 537 bp overlap
ChIP K562 ENCFF397QGU 147 bp overlap
ChIP K562 ENCFF495XTL 257 bp overlap
YY1 4 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 261 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 96 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 139 bp overlap
ChIP K562 ENCFF660QRE 311 bp overlap
ZBTB33 3 datasets
ChIP HepG2 ENCFF778UKV 319 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 305 bp overlap
ChIP K562 ENCFF875HLX 356 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 202 bp overlap
ZFP14 4 datasets
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
Motif DE_48h DE_48h-ZFP14_MA1972.1 15 bp overlap
Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap
Motif DE_72h DE_72h-ZFP14_MA1972.1 15 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZIC1 4 datasets
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_48h DE_48h-ZIC1_MA0696.1 14 bp overlap
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap
ZIC4 4 datasets
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif DE_48h DE_48h-ZIC4_MA0751.2 14 bp overlap
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZIC5 4 datasets
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
Motif DE_48h DE_48h-ZIC5_MA1584.2 15 bp overlap
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
Motif DE_72h DE_72h-ZIC5_MA1584.2 15 bp overlap
ZNF140 4 datasets
Motif DE_36h DE_36h-ZNF140_MA1589.2 19 bp overlap
Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap
Motif DE_60h DE_60h-ZNF140_MA1589.2 19 bp overlap
Motif DE_72h DE_72h-ZNF140_MA1589.2 19 bp overlap
ZNF157 2 datasets
Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap
Motif DE_72h DE_72h-ZNF157_MA2331.1 21 bp overlap
ZNF16 3 datasets
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
Motif DE_72h DE_72h-ZNF16_MA1654.2 21 bp overlap
ZNF197 1 dataset
ChIP K562 ENCFF872BAU 605 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ChIP K562 ENCFF594VNM 433 bp overlap
ZNF317 2 datasets
Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap
Motif DE_72h DE_72h-ZNF317_MA1593.2 8 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 653 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 214 bp overlap
ZNF583 2 datasets
ChIP K-562 ENCSR775EQV.ZNF583.K-562 312 bp overlap
ChIP K562 ENCFF879KXH 357 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 348 bp overlap
ChIP K562 ENCFF547OSS 218 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 353 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF692 4 datasets
Motif DE_36h DE_36h-ZNF692_MA1986.2 8 bp overlap
Motif DE_48h DE_48h-ZNF692_MA1986.2 8 bp overlap
Motif DE_60h DE_60h-ZNF692_MA1986.2 8 bp overlap
Motif DE_72h DE_72h-ZNF692_MA1986.2 8 bp overlap
ZNF766 2 datasets
ChIP K562 ENCFF348LDO 469 bp overlap
ChIP K562 ENCFF348LDO 605 bp overlap
ZNF768 4 datasets
Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap
Motif DE_72h DE_72h-ZNF768_MA1731.2 9 bp overlap
Zfp809 4 datasets
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Motif DE_48h DE_48h-Zfp809_MA2125.1 9 bp overlap
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap