chr2 : 219,496,628 219,497,255
627 bp 114 TFs 4 linked genes
This 627 bp open chromatin element is linked to 4 target genes and is bound by 114 transcription factors.
Linked Genes
4 genes
Distance
Gene Expression Dist. to TSS Distance Link type
SPEGNB 434 bp At TSS Proximity
ENSG00000268603 1.4 kb Proximal Proximity
GMPPA 1.6 kb Proximal Proximity
ENSG00000286143 4.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:219,491,628 – 219,502,255
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
114 transcription factors
Source
Cell type
AGO1 5 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 576 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 398 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 87 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 273 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 181 bp overlap
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 297 bp overlap
AR 4 datasets
ChIP LTAD_siCOBLL1 GSE94577.AR.LTAD_siCOBLL1 59 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 239 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 417 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 514 bp overlap
ARID2 1 dataset
ChIP HepG2 ENCFF317ZHO 202 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 335 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 453 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 605 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 186 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 91 bp overlap
BRD4 13 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 500 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 501 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 175 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 294 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 260 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 342 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 276 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 197 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 327 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 404 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 93 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 487 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 626 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 202 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 57 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 177 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 256 bp overlap
CTCF 10 datasets
ChIP HCT-116 GSE131606.CTCF.HCT-116 168 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 498 bp overlap
ChIP esophagus muscularis mucosa ENCFF544GAS 357 bp overlap
ChIP esophagus muscularis mucosa ENCFF544GAS 154 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR353DFU.CTCF.esophagus_muscularis-mucosa 315 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 412 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 416 bp overlap
ChIP gastroesophageal sphincter ENCFF607YRA 112 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 224 bp overlap
ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 230 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 266 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 83 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 219 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 206 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 461 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 199 bp overlap
ChIP ME-1 GSE46044.ELF1.ME-1 222 bp overlap
EP300 1 dataset
ChIP sigmoid colon ENCFF953ZIP 222 bp overlap
EPAS1 1 dataset
ChIP 501-mel GSE95280.EPAS1.501-mel 288 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 254 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 157 bp overlap
ESR1 6 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 505 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 184 bp overlap
ChIP Ishikawa_EnhiE2 GSE99905.ESR1.Ishikawa_EnhiE2 266 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 216 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 186 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 546 bp overlap
EZH2 17 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 625 bp overlap
ChIP H1 ENCFF232NZA 627 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 627 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 627 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 563 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 175 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 272 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 627 bp overlap
ChIP fibroblast of lung ENCFF479BAW 580 bp overlap
ChIP fibroblast of lung ENCFF479BAW 304 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 627 bp overlap
ChIP hESC GSE113817.EZH2.hESC 455 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 437 bp overlap
ChIP keratinocyte ENCFF070STK 222 bp overlap
ChIP neural cell ENCFF610EPB 358 bp overlap
ChIP neural progenitor cell ENCFF018MKA 627 bp overlap
ChIP neural progenitor cell ENCFF472NFV 627 bp overlap
FIP1L1 2 datasets
ChIP K-562 ENCSR177DNR.FIP1L1.K-562 186 bp overlap
ChIP K-562 GSE120104.FIP1L1.K-562 186 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 510 bp overlap
FOXK1 2 datasets
ChIP WTC11 ENCFF875IGU 391 bp overlap
ChIP WTC11 ENCFF875IGU 336 bp overlap
FOXO4 1 dataset
ChIP HepG2 ENCFF909ISL 83 bp overlap
GABPA 3 datasets
ChIP H1 ENCFF739QFD 323 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 145 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 133 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 256 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 338 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 363 bp overlap
HIC2 1 dataset
ChIP HepG2 ENCFF927POV 184 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 300 bp overlap
HNRNPLL 3 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 414 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 229 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 113 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 287 bp overlap
JARID2 3 datasets
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 474 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 270 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 489 bp overlap
KDM3A 1 dataset
ChIP HepG2 ENCFF077DXQ 356 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 627 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 385 bp overlap
MBD2 2 datasets
ChIP HMEC-1 GSE63233.MBD2.HMEC-1 322 bp overlap
ChIP HeLa GSE41006.MBD2.HeLa 183 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 182 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 148 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 176 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 440 bp overlap
MXD1 2 datasets
ChIP HepG2 ENCFF717MYN 494 bp overlap
ChIP HepG2 ENCFF717MYN 293 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 627 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 356 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 53 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 558 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 152 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 104 bp overlap
NRL 1 dataset
ChIP HepG2 ENCFF528PUT 137 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 596 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 621 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 502 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 550 bp overlap
POLR2A 19 datasets
ChIP esophagus muscularis mucosa ENCFF432ZCY 396 bp overlap
ChIP esophagus muscularis mucosa ENCFF617PTB 301 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 282 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 443 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 312 bp overlap
ChIP gastroesophageal sphincter ENCFF043KAM 113 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 323 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 432 bp overlap
ChIP gastroesophageal sphincter ENCFF461UHJ 421 bp overlap
ChIP gastroesophageal sphincter ENCFF461UHJ 200 bp overlap
ChIP sigmoid colon ENCFF101ILL 123 bp overlap
ChIP sigmoid colon ENCFF653CQA 425 bp overlap
ChIP sigmoid colon ENCFF661AMI 185 bp overlap
ChIP sigmoid colon ENCFF725QFT 128 bp overlap
ChIP sigmoid colon ENCFF725QFT 331 bp overlap
ChIP sigmoid colon ENCFF748YVT 361 bp overlap
ChIP sigmoid colon ENCFF754JQR 288 bp overlap
ChIP stomach ENCFF278MYS 241 bp overlap
ChIP transverse colon ENCFF840PXT 321 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 457 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 514 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 627 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 200 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 223 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 334 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 226 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 332 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 125 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 548 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 537 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 583 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 582 bp overlap
REST 2 datasets
ChIP CD4 GSE49570.REST.CD4 225 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 310 bp overlap
RNF2 6 datasets
ChIP H1 ENCFF239FFS 571 bp overlap
ChIP H1 ENCFF239FFS 448 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 627 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 148 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 627 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 627 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 242 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 369 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 440 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 156 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 157 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 247 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 256 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 176 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
SMARCA4 3 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 339 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 395 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 430 bp overlap
SMYD3 1 dataset
ChIP HepG2 ENCFF612TNJ 82 bp overlap
SP4 1 dataset
ChIP HepG2 ENCFF865DSQ 561 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 547 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 186 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 224 bp overlap
SUZ12 11 datasets
ChIP GM12878 ENCFF498QAM 275 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 445 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 627 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 545 bp overlap
ChIP NT2/D1 ENCFF574SXS 449 bp overlap
ChIP NT2/D1 ENCFF574SXS 497 bp overlap
ChIP NT2/D1 ENCFF574SXS 279 bp overlap
ChIP NT2/D1 ENCFF574SXS 50 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 627 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 240 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 174 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 174 bp overlap
TARDBP 1 dataset
ChIP HepG2 ENCFF356JNC 55 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 228 bp overlap
TCF12 2 datasets
ChIP HepG2 ENCFF802XCI 317 bp overlap
ChIP HepG2 ENCFF802XCI 80 bp overlap
TFAP4 1 dataset
ChIP HepG2 ENCFF932XOY 126 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 524 bp overlap
THYN1 1 dataset
ChIP HepG2 ENCFF798MNZ 68 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 304 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 86 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 173 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 442 bp overlap
TSC22D1 1 dataset
ChIP HepG2 ENCFF357KSA 77 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 407 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 462 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 627 bp overlap
ChIP K562 ENCFF427SDV 382 bp overlap
ChIP K562 ENCFF875HLX 539 bp overlap
ZBTB34 1 dataset
ChIP HepG2 ENCFF161MIO 60 bp overlap
ZBTB38 2 datasets
ChIP HepG2 ENCFF875UQX 519 bp overlap
ChIP HepG2 ENCFF875UQX 319 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 323 bp overlap
ZBTB7A 1 dataset
ChIP HepG2 ENCFF492YYQ 193 bp overlap
ZC3H13 1 dataset
ChIP HepG2 ENCFF444JZJ 279 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 309 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 341 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 405 bp overlap
ZNF181 1 dataset
ChIP HepG2 ENCFF222AKV 64 bp overlap
ZNF274 2 datasets
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 174 bp overlap
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 185 bp overlap
ZNF333 1 dataset
ChIP HepG2 ENCFF038JAL 283 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 202 bp overlap
ZNF445 1 dataset
ChIP HEK293T GSE78099.ZNF445.HEK293T 373 bp overlap
ZNF891 1 dataset
ChIP HepG2 ENCFF491CCY 163 bp overlap