chr1 : 46,690,974 46,691,391
417 bp 108 TFs 0 linked genes
This 417 bp open chromatin element has no linked target genes and is bound by 108 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:46,685,974 – 46,696,391
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
ATF4 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 241 bp overlap
BCL11B 2 datasets
ChIP HEK293 ENCFF859UHP 326 bp overlap
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 417 bp overlap
BCL6B 2 datasets
ChIP HEK293 ENCFF555YRB 339 bp overlap
ChIP HEK293 ENCSR673SGK.BCL6B.HEK293 325 bp overlap
BRD4 3 datasets
ChIP HEK293T GSE51633.BRD4.HEK293T 172 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 417 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 344 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 331 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 234 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 242 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 300 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 297 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 134 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 417 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 417 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 326 bp overlap
FLI1 4 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 299 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 265 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 294 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 333 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 417 bp overlap
ChIP DE DE-FOXA2-2 413 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 417 bp overlap
ChIP DE DE-GATA4-2 417 bp overlap
ChIP foregut GSE117136.GATA4.foregut 417 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 243 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 417 bp overlap
ChIP DE DE-GATA6-2 417 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 417 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 417 bp overlap
ChIP foregut GSE117136.GATA6.foregut 396 bp overlap
GFI1B 2 datasets
ChIP HEK293 ENCFF264FBS 325 bp overlap
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 356 bp overlap
GLI2 2 datasets
ChIP HEK293 ENCFF700EUN 305 bp overlap
ChIP HEK293 ENCSR978EQY.GLI2.HEK293 256 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 417 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 417 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 134 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 381 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 340 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 308 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 134 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 417 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 361 bp overlap
KLF7 2 datasets
ChIP HEK293 ENCFF599UKL 336 bp overlap
ChIP HEK293 ENCSR604VWJ.KLF7.HEK293 273 bp overlap
KLF9 2 datasets
ChIP HEK293 ENCFF588INF 406 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 233 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 214 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 176 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 415 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 320 bp overlap
MEIS1 1 dataset
ChIP A-673 GSE109477.MEIS1.A-673 173 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 310 bp overlap
ChIP K562 ENCFF320GSD 207 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 382 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 297 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 247 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 365 bp overlap
MYC 1 dataset
ChIP DLD-1_MYC-activated GSE117240.MYC.DLD-1_MYC-activated 158 bp overlap
MYCN 7 datasets
ChIP IMR-5_CD532 GSE78957.MYCN.IMR-5_CD532 98 bp overlap
ChIP IMR-5_DMSO GSE78957.MYCN.IMR-5_DMSO 101 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 413 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 253 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 417 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 253 bp overlap
ChIP SHEP-21N_DOX_24H GSE80151.MYCN.SHEP-21N_DOX_24H 203 bp overlap
NR4A1 1 dataset
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 249 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 372 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 417 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 307 bp overlap
OVOL3 2 datasets
ChIP HEK293 ENCFF898STB 353 bp overlap
ChIP HEK293 ENCSR768LIO.OVOL3.HEK293 354 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 387 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 378 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 388 bp overlap
ChIP K562 ENCFF286KMN 289 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 128 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 265 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 290 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 372 bp overlap
PKNOX1 4 datasets
ChIP HEK293T ENCFF174WDB 182 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 373 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 306 bp overlap
ChIP K562 ENCFF236IUS 120 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 175 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 405 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 416 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 417 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 215 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 293 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 417 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 381 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 179 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 242 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 417 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 417 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 417 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 235 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 248 bp overlap
SMARCA4 10 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 393 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 191 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 285 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 243 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 417 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 417 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 417 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 417 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 187 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 217 bp overlap
SMARCB1 4 datasets
ChIP TTC-1240 GSE124903.SMARCB1.TTC-1240 290 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCB1.TTC-1240_R377H 417 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCB1.TTC-1240_SMARCB1-FL 212 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCB1.TTC-1240_delC 386 bp overlap
SMARCC1 5 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 417 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 417 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 410 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 417 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 374 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 322 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 387 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 253 bp overlap
SP2 1 dataset
ChIP HEK293 GSE76494.SP2.HEK293 181 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 417 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 417 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 206 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 262 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 288 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 385 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 279 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 279 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 317 bp overlap
TSHZ1 2 datasets
ChIP HEK293 ENCFF893BGV 337 bp overlap
ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 382 bp overlap
TWIST1 5 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 417 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 417 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 417 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 417 bp overlap
ChIP SHEP-21N_DOX_24H GSE80151.TWIST1.SHEP-21N_DOX_24H 384 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 362 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 330 bp overlap
YY1 2 datasets
ChIP HEK293 ENCFF734SBY 382 bp overlap
ChIP HEK293 ENCSR859RAO.YY1.HEK293 257 bp overlap
ZBTB1 1 dataset
ChIP HEK293 ENCSR927UJQ.ZBTB1.HEK293 251 bp overlap
ZBTB12 2 datasets
ChIP HEK293 ENCFF963HPT 311 bp overlap
ChIP HEK293 ENCSR543KOA.ZBTB12.HEK293 402 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 167 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 370 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 330 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 417 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 417 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 375 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 358 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 407 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 269 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 375 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCFF611ZJI 377 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 397 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 318 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 270 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 417 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 364 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 417 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 404 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 392 bp overlap
ZNF281 1 dataset
ChIP HEK293 GSE76494.ZNF281.HEK293 167 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 205 bp overlap
ZNF331 1 dataset
ChIP HEK293 GSE76494.ZNF331.HEK293 158 bp overlap
ZNF34 1 dataset
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 383 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 255 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 342 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 213 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 280 bp overlap
ZNF423 2 datasets
ChIP HEK293 ENCFF937QHI 329 bp overlap
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 298 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 351 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 281 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 229 bp overlap
ZNF561 3 datasets
ChIP HEK293 ENCFF399XKF 370 bp overlap
ChIP HEK293 ENCFF399XKF 283 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 404 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 159 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 131 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 417 bp overlap
ZNF610 2 datasets
ChIP HEK293 ENCFF778UKJ 399 bp overlap
ChIP HEK293 ENCSR691TXI.ZNF610.HEK293 392 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 173 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 417 bp overlap
ZNF639 2 datasets
ChIP HEK293 ENCFF971ZNH 365 bp overlap
ChIP HEK293 ENCSR080CST.ZNF639.HEK293 304 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 297 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 417 bp overlap
ZSCAN23 2 datasets
ChIP HEK293 ENCFF127TFV 365 bp overlap
ChIP HEK293 ENCSR705ASR.ZSCAN23.HEK293 254 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 265 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 345 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 357 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 364 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 417 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 373 bp overlap