chr2 : 126,655,117 – 126,655,457
340 bp 97 TFs 1 linked gene
This 340 bp open chromatin element is linked to GYPC and is bound by 97 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GYPC 725 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:126,650,117 – 126,660,457
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
97 transcription factors
Source
Cell type
AR 2 datasets
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 174 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 274 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 186 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 172 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 221 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 340 bp overlap
ChIP K562 ENCFF343XWA 288 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 152 bp overlap
BRD2 5 datasets
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD2.K-562_iBET-BD1-IFNG 300 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD2.K-562_iBET-BD2-IFNG 200 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 214 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 340 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 337 bp overlap
BRD3 3 datasets
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 298 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 172 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 340 bp overlap
BRD4 7 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 246 bp overlap
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 131 bp overlap
ChIP K-562_iBET-BD1 GSE138084.BRD4.K-562_iBET-BD1 247 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 340 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 240 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 190 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 205 bp overlap
BRD9 2 datasets
ChIP K-562 ENCSR177XCS.BRD9.K-562 340 bp overlap
ChIP K562 ENCFF480JXZ 246 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 208 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 262 bp overlap
ChIP K562 ENCFF673OEZ 157 bp overlap
CEBPB 1 dataset
ChIP K-562 ENCSR000EHE.CEBPB.K-562 141 bp overlap
CHD4 4 datasets
ChIP 501-mel GSE134848.CHD4.501-mel 225 bp overlap
ChIP K562 ENCFF933NKI 340 bp overlap
ChIP K562 ENCFF933NKI 211 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 340 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 239 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF902MYN 152 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 250 bp overlap
Cebpa 6 datasets
ChIP BLaER1 ENCFF031ISE 240 bp overlap
ChIP BLaER1 ENCFF093OYK 340 bp overlap
ChIP BLaER1 ENCFF274GAT 243 bp overlap
ChIP BLaER1 ENCFF364PUR 340 bp overlap
ChIP BLaER1 ENCFF844FIP 177 bp overlap
ChIP BLaER1 ENCFF858JKM 199 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 183 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 248 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 196 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 163 bp overlap
ChIP K562 ENCFF006PJY 245 bp overlap
EZH2 5 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 340 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 289 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 208 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 236 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 197 bp overlap
EZH2_phosphoT487 1 dataset
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 278 bp overlap
FOXA1 1 dataset
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 163 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 332 bp overlap
ChIP DE DE-FOXA2-2 340 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 267 bp overlap
FOXF1 2 datasets
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 303 bp overlap
ChIP GIST48 GSE106624.FOXF1.GIST48 303 bp overlap
FOXK2 3 datasets
ChIP K-562 ENCSR302AWT.FOXK2.K-562 288 bp overlap
ChIP K-562 ENCSR508DQA.FOXK2.K-562 230 bp overlap
ChIP K562 ENCFF851PFH 340 bp overlap
GATA1 2 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 118 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 252 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 249 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 340 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 340 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 218 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 340 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 96 bp overlap
JUN 1 dataset
ChIP K-562 ENCSR000EFS.JUN.K-562 50 bp overlap
KDM1A 12 datasets
ChIP K-562 GSE117944.KDM1A.K-562 248 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 63 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 215 bp overlap
ChIP K562 ENCFF128TYE 84 bp overlap
ChIP K562 ENCFF133OLU 301 bp overlap
ChIP K562 ENCFF934ZRG 340 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 180 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 340 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 136 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 245 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 235 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 142 bp overlap
KLF4 3 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 272 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 306 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 147 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 300 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 147 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 203 bp overlap
MAX 6 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 162 bp overlap
ChIP K562 ENCFF398VJM 248 bp overlap
ChIP K562 ENCFF524IJO 122 bp overlap
ChIP K562 ENCFF524IJO 340 bp overlap
ChIP K562 ENCFF524IJO 133 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 195 bp overlap
MED1 1 dataset
ChIP U-87MG GSE36354.MED1.U-87MG 145 bp overlap
MNT 2 datasets
ChIP K-562 ENCSR390VGH.MNT.K-562 116 bp overlap
ChIP K562 ENCFF342DNS 340 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 223 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 217 bp overlap
MYOD1 2 datasets
ChIP RD GSE137168.MYOD1.RD 243 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 164 bp overlap
NELFA 1 dataset
ChIP K-562_HS GSE112379.NELFA.K-562_HS 280 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 177 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 178 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 101 bp overlap
NFRKB 1 dataset
ChIP K-562 ENCSR657EOF.NFRKB.K-562 200 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 139 bp overlap
NR3C1 7 datasets
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 340 bp overlap
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 274 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 130 bp overlap
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 265 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 72 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 201 bp overlap
ChIP U2OS_SHNS GSE65847.NR3C1.U2OS_SHNS 107 bp overlap
NRF1 1 dataset
ChIP K-562 ENCSR837EYC.NRF1.K-562 60 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 340 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 85 bp overlap
PHF8 1 dataset
ChIP K-562 ENCSR000AQH.PHF8.K-562 65 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 311 bp overlap
ChIP K562 ENCFF236IUS 324 bp overlap
POLR2A 3 datasets
ChIP heart left ventricle ENCFF591JWH 307 bp overlap
ChIP heart left ventricle ENCFF591JWH 215 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 329 bp overlap
POU5F1 5 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 249 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 340 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 300 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 340 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 149 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 236 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 180 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 340 bp overlap
RBBP5 1 dataset
ChIP K-562 ENCSR000AQI.RBBP5.K-562 85 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 131 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 234 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 226 bp overlap
SAP30 1 dataset
ChIP K-562 ENCSR000AQJ.SAP30.K-562 130 bp overlap
SIN3A 3 datasets
ChIP K-562 ENCSR920BLG.SIN3A.K-562 132 bp overlap
ChIP K562 ENCFF984TCS 340 bp overlap
ChIP K562 ENCFF984TCS 298 bp overlap
SMARCA4 4 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 151 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 274 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 224 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 246 bp overlap
SMARCA5 2 datasets
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 134 bp overlap
ChIP K562 ENCFF936KHY 265 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 149 bp overlap
SMC1A 1 dataset
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 110 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 196 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 304 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 326 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 304 bp overlap
SOX6 3 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 340 bp overlap
ChIP K562 ENCFF059YCJ 340 bp overlap
ChIP K562 ENCFF059YCJ 229 bp overlap
TAF1 2 datasets
ChIP K-562 ENCSR000BKS.TAF1.K-562 179 bp overlap
ChIP K562 ENCFF491WAE 340 bp overlap
TAL1 4 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 207 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 198 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 228 bp overlap
ChIP K562 ENCFF661CCK 225 bp overlap
TBP 2 datasets
ChIP K-562 ENCSR000EHA.TBP.K-562 133 bp overlap
ChIP K562 ENCFF901UYM 281 bp overlap
TCF3 3 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 140 bp overlap
ChIP K562 ENCFF319QZT 340 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 340 bp overlap
TEAD4 2 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 252 bp overlap
ChIP K562 ENCFF673NIK 294 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 162 bp overlap
YY1 5 datasets
ChIP ALL GSE145549.YY1.ALL 76 bp overlap
ChIP GM12878 ENCFF908JTL 225 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 237 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 127 bp overlap
ChIP liver ENCFF400MBC 236 bp overlap
ZBTB11 2 datasets
ChIP K562 ENCFF215OUF 340 bp overlap
ChIP K562 ENCFF215OUF 340 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 288 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 270 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 169 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 277 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 228 bp overlap
ZFX 3 datasets
ChIP K-562 ENCSR920ASP.ZFX.K-562 328 bp overlap
ChIP K562 ENCFF169LZT 340 bp overlap
ChIP K562 ENCFF536AJO 340 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 278 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 334 bp overlap
ChIP K562 ENCFF361LXT 214 bp overlap
ZNF311 1 dataset
ChIP K-562 ENCSR388ZRV.ZNF311.K-562 91 bp overlap
ZNF550 1 dataset
ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 215 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 340 bp overlap
ChIP K562 ENCFF547OSS 292 bp overlap
ZNF644 1 dataset
ChIP K-562 ENCSR729HVR.ZNF644.K-562 179 bp overlap
ZNF672 1 dataset
ChIP HepG2 ENCFF643OKA 285 bp overlap
ZNF737 1 dataset
ChIP Hep-G2 ENCSR127IHN.ZNF737.Hep-G2 242 bp overlap
ZNF76 1 dataset
ChIP K-562 ENCSR257AFV.ZNF76.K-562 61 bp overlap
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