chr2 : 84,969,143 84,969,506
363 bp 109 TFs 2 linked genes
This 363 bp open chromatin element is linked to ENSG00000290085 and KCMF1 and is bound by 109 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000290085 1.2 kb Proximal Proximity
KCMF1 1.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:84,964,143 – 84,974,506
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 81 bp overlap
AFF1 1 dataset
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 316 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 103 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 249 bp overlap
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 262 bp overlap
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 264 bp overlap
ATF4 1 dataset
ChIP HepG2 ENCFF903ADR 243 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 363 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 64 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 152 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 121 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 228 bp overlap
BRD4 11 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 221 bp overlap
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 209 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 74 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 114 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 80 bp overlap
ChIP SEM GSE83671.BRD4.SEM 111 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 68 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 123 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 238 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 73 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 144 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 87 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000EBU.CHD1.WA01 245 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 121 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 248 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 119 bp overlap
ChIP K562 ENCFF622HMZ 68 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 82 bp overlap
ChIP LCL GSE75503.EBF1.LCL 123 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 183 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 54 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 67 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 65 bp overlap
ELF2 1 dataset
ChIP K562 ENCFF787SME 98 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 363 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 266 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 328 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 179 bp overlap
ETS1 1 dataset
ChIP HEY-A8 GSE101832.ETS1.HEY-A8 195 bp overlap
ETV1 1 dataset
ChIP K562 ENCFF389WTI 55 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 99 bp overlap
FOXA1 11 datasets
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 162 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 137 bp overlap
ChIP HepG2 ENCFF207NVJ 71 bp overlap
ChIP HepG2 ENCFF361KNY 199 bp overlap
ChIP HepG2 ENCFF740VZW 186 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 264 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 151 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 140 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 197 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 333 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 193 bp overlap
FOXA2 9 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 323 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 162 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 184 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 120 bp overlap
ChIP DE DE-FOXA2-1 363 bp overlap
ChIP DE DE-FOXA2-2 363 bp overlap
ChIP HepG2 ENCFF533COJ 200 bp overlap
ChIP HepG2 ENCFF570ABM 118 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 189 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 347 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 342 bp overlap
GATA1 7 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 223 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 168 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 260 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 160 bp overlap
ChIP erythroblast ENCFF867JAR 363 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 363 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 238 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 193 bp overlap
GATA4 9 datasets
ChIP A-549 GSE85002.GATA4.A-549 292 bp overlap
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 285 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 168 bp overlap
ChIP DE DE-GATA4-1 363 bp overlap
ChIP DE DE-GATA4-2 363 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 363 bp overlap
ChIP foregut GSE117136.GATA4.foregut 363 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 363 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 278 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 239 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 228 bp overlap
ChIP DE DE-GATA6-1 363 bp overlap
ChIP DE DE-GATA6-2 363 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 363 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 363 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 330 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 363 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 336 bp overlap
ChIP foregut GSE117136.GATA6.foregut 363 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 363 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 253 bp overlap
GFI1B 3 datasets
ChIP HEK293 ENCFF264FBS 192 bp overlap
ChIP HEK293 ENCFF264FBS 287 bp overlap
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 195 bp overlap
GZF1 1 dataset
ChIP HepG2 ENCFF060TLH 83 bp overlap
HDAC1 3 datasets
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 192 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 79 bp overlap
ChIP NB4 GSE126720.HDAC1.NB4 174 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 142 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 198 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B GSE145834.HIF1A.BEAS-2B 74 bp overlap
HOXB13 3 datasets
ChIP LNCaP GSE96652.HOXB13.LNCaP 137 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 162 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 52 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 176 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 244 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 135 bp overlap
IRF4 1 dataset
ChIP OCI-Ly3 GSE56857.IRF4.OCI-Ly3 177 bp overlap
JUND 2 datasets
ChIP HCT116 ENCFF748ZQX 145 bp overlap
ChIP HCT116 ENCFF748ZQX 349 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 300 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 319 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 363 bp overlap
KMT2A 5 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 247 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 363 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 135 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 363 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 200 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 114 bp overlap
MEF2B 2 datasets
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 131 bp overlap
ChIP tonsil GSE110682.MEF2B.tonsil 134 bp overlap
MEN1 3 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 363 bp overlap
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 363 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 363 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 96 bp overlap
NBN 2 datasets
ChIP GM12878 ENCSR278SQL.NBN.GM12878 95 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 88 bp overlap
NFIC 1 dataset
ChIP HepG2 ENCFF169TKU 146 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCFF273VKX 121 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 51 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 273 bp overlap
PML 1 dataset
ChIP GM12878 ENCFF160JQZ 188 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 85 bp overlap
POLR2A 9 datasets
ChIP GM12878 ENCFF412KAE 268 bp overlap
ChIP GM18505 ENCFF311CYB 100 bp overlap
ChIP GM19099 ENCFF726IBN 345 bp overlap
ChIP GM19099 ENCFF726IBN 133 bp overlap
ChIP HepG2 ENCFF350RIU 363 bp overlap
ChIP HepG2 ENCFF718XAJ 328 bp overlap
ChIP HepG2 ENCFF718XAJ 120 bp overlap
ChIP body of pancreas ENCFF501FEC 281 bp overlap
ChIP body of pancreas ENCFF727UBE 317 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 276 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF939HTZ 255 bp overlap
ChIP K562 ENCFF967GRF 261 bp overlap
RCOR1 1 dataset
ChIP GM12878 ENCFF982CRX 52 bp overlap
RELA 2 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 202 bp overlap
ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.RELA.HeLa-B2_P65KD_TA_TNFA 108 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 260 bp overlap
RUNX1 1 dataset
ChIP CD34_ADULT GSE70660.RUNX1.CD34_ADULT 170 bp overlap
SAP130 2 datasets
ChIP HepG2 ENCFF892EHZ 308 bp overlap
ChIP HepG2 ENCFF892EHZ 316 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 142 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 84 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 311 bp overlap
SMAD5 1 dataset
ChIP GM12878 ENCSR251OVJ.SMAD5.GM12878 127 bp overlap
SMARCA4 7 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 170 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 363 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 358 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 154 bp overlap
ChIP K562 ENCFF506JCB 257 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 115 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 238 bp overlap
SMARCB1 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.SMARCB1.RMG-I_ARID1A-KO 181 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 253 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 301 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 114 bp overlap
STAT5B 1 dataset
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 88 bp overlap
SUPT5H 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 335 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 235 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 143 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 174 bp overlap
SUPT6H 2 datasets
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 140 bp overlap
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 232 bp overlap
TBP 1 dataset
ChIP HeLa-S3 ENCFF715NNJ 247 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 363 bp overlap
TGIF2 1 dataset
ChIP HepG2 ENCFF421ZJN 333 bp overlap
ZBTB3 1 dataset
ChIP HepG2 ENCFF224AQL 273 bp overlap
ZBTB40 1 dataset
ChIP GM12878 ENCFF346DYM 81 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 305 bp overlap
ZHX1 2 datasets
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 146 bp overlap
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 68 bp overlap
ZMYM3 1 dataset
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 147 bp overlap
ZNF24 1 dataset
ChIP GM12878 ENCFF688STO 167 bp overlap
ZNF275 3 datasets
ChIP HepG2 ENCFF015JKD 60 bp overlap
ChIP HepG2 ENCFF015JKD 260 bp overlap
ChIP HepG2 ENCFF015JKD 363 bp overlap
ZNF34 1 dataset
ChIP HepG2 ENCFF739BBD 363 bp overlap
ZNF510 1 dataset
ChIP HepG2 ENCFF088QOO 222 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 298 bp overlap
ZNF761 1 dataset
ChIP HepG2 ENCFF761IOF 363 bp overlap
ZSCAN29 1 dataset
ChIP HepG2 ENCFF212SBM 283 bp overlap