chr2 : 39,435,272 39,435,584
312 bp 101 TFs 2 linked genes
This 312 bp open chromatin element is linked to MAP4K3 and MAP4K3-DT and is bound by 101 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MAP4K3 1.6 kb Proximal Proximity
MAP4K3-DT 1.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:39,430,272 – 39,440,584
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
101 transcription factors
Source
Cell type
None 1 dataset
ChIP HepG2 ENCFF731CFD 255 bp overlap
AR 2 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 143 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 140 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 244 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 259 bp overlap
ChIP HepG2 ENCFF317ZHO 312 bp overlap
ARNTL 1 dataset
ChIP Hep-G2 ENCSR794LVK.ARNTL.Hep-G2 209 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 312 bp overlap
BRD2 2 datasets
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 249 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 248 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 266 bp overlap
BRD4 6 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 270 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 217 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 278 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 297 bp overlap
ChIP PC-3 GSE137207.BRD4.PC-3 182 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 135 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 106 bp overlap
ChIP myometrium_PT848 GSE128230.CDK8.myometrium_PT848 58 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 198 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 221 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 271 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 242 bp overlap
CTCF 3 datasets
ChIP heart right ventricle ENCFF755UXZ 100 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 167 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 179 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF335XTP 253 bp overlap
ChIP BLaER1 ENCFF460KDD 288 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 216 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 136 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 96 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 163 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 64 bp overlap
FBXL19 1 dataset
ChIP HepG2 ENCFF127ONN 280 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 250 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 146 bp overlap
GATA2 10 datasets
ChIP ESF GSE108408.GATA2.ESF 223 bp overlap
ChIP HepG2 ENCFF905PYM 256 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 264 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 137 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 245 bp overlap
ChIP SH-SY5Y ENCFF485YIB 304 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 312 bp overlap
ChIP SK-N-SH ENCFF764OZD 293 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 192 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 173 bp overlap
GATA3 3 datasets
ChIP SH-SY5Y ENCFF475HYF 200 bp overlap
ChIP SK-N-SH ENCFF040SSB 293 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 153 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 216 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 234 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 312 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-2 253 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 246 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 274 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 293 bp overlap
GATAD2B 1 dataset
ChIP HepG2 ENCFF829IBY 216 bp overlap
GMEB1 1 dataset
ChIP Hep-G2 ENCSR780OXL.GMEB1.Hep-G2 231 bp overlap
HDAC1 7 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 312 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 312 bp overlap
ChIP K562 ENCFF968WBH 312 bp overlap
ChIP K562 ENCFF968WBH 246 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 173 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 92 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 168 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 297 bp overlap
ChIP K-562 GSE140325.HDAC2.K-562 92 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 128 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 312 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 311 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 279 bp overlap
ChIP K562 ENCFF055GAZ 312 bp overlap
ChIP K562 ENCFF317JJX 312 bp overlap
HMGXB4 2 datasets
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 131 bp overlap
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 185 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 152 bp overlap
KDM5A 2 datasets
ChIP HepG2 ENCFF105YGO 312 bp overlap
ChIP HepG2 ENCFF105YGO 312 bp overlap
KMT2A 10 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 104 bp overlap
ChIP HEK293T_C-term GSE90762.KMT2A.HEK293T_C-term 273 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 312 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 312 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 231 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 235 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 299 bp overlap
ChIP HepG2 ENCFF103PKS 312 bp overlap
ChIP HepG2 ENCFF103PKS 146 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 312 bp overlap
KMT2B 1 dataset
ChIP HepG2 ENCFF675TEK 52 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 172 bp overlap
ChIP HepG2 ENCFF507HCX 312 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 208 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 209 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 171 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 291 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 209 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 189 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 244 bp overlap
MZF1 3 datasets
ChIP HEK293 ENCFF683ZWN 229 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 312 bp overlap
ChIP HEK293 GSE76494.MZF1.HEK293 148 bp overlap
NACC2 1 dataset
ChIP HepG2 ENCFF165SVB 192 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 69 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 256 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 293 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 243 bp overlap
PHIP 2 datasets
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 53 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 64 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 298 bp overlap
POLR2A 3 datasets
ChIP sigmoid colon ENCFF653CQA 312 bp overlap
ChIP sigmoid colon ENCFF653CQA 126 bp overlap
ChIP sigmoid colon ENCFF754JQR 309 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 260 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 134 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 312 bp overlap
RAD21 3 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 306 bp overlap
ChIP MDM_IFNb GSE103477.RAD21.MDM_IFNb 249 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 207 bp overlap
RBBP5 1 dataset
ChIP K-562 ENCSR000AQI.RBBP5.K-562 131 bp overlap
RBPJ 1 dataset
ChIP HepG2 ENCFF367CFI 312 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 185 bp overlap
RFX1 1 dataset
ChIP K-562 ENCSR041AXL.RFX1.K-562 222 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 190 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 243 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 174 bp overlap
SAP130 2 datasets
ChIP HepG2 ENCFF892EHZ 246 bp overlap
ChIP HepG2 ENCFF892EHZ 312 bp overlap
SIN3A 3 datasets
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 175 bp overlap
ChIP HepG2 ENCFF394WQQ 162 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 167 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 170 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 312 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 229 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 134 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 290 bp overlap
SPEN 1 dataset
ChIP HepG2 ENCFF939VPY 312 bp overlap
TAL1 1 dataset
ChIP CD34 GSE52924.TAL1.CD34 174 bp overlap
TBX5 2 datasets
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 312 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 312 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 289 bp overlap
THRA 2 datasets
ChIP HepG2 ENCFF025KMX 289 bp overlap
ChIP HepG2 ENCFF025KMX 143 bp overlap
TOPORS 1 dataset
ChIP HepG2 ENCFF581ABM 312 bp overlap
USF3 1 dataset
ChIP HepG2 ENCFF010CPF 110 bp overlap
WDR5 2 datasets
ChIP K-562_C6nc GSE115377.WDR5.K-562_C6nc 190 bp overlap
ChIP K-562_DMSO GSE115377.WDR5.K-562_DMSO 203 bp overlap
XRCC5 1 dataset
ChIP HepG2 ENCFF680LVJ 312 bp overlap
YAP1 1 dataset
ChIP hiPSC GSE111930.YAP1.hiPSC 149 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 180 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 312 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 229 bp overlap
ZBTB25 1 dataset
ChIP HepG2 ENCFF648SDH 232 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 302 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 312 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 162 bp overlap
ZFX 7 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 269 bp overlap
ChIP HepG2 ENCFF016NZF 295 bp overlap
ChIP K-562 ENCSR920ASP.ZFX.K-562 183 bp overlap
ChIP K562 ENCFF536AJO 312 bp overlap
ChIP MCF-7 ENCFF009NAJ 312 bp overlap
ChIP MCF-7 ENCSR435OQD.ZFX.MCF-7 312 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 305 bp overlap
ZFY 2 datasets
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 231 bp overlap
ChIP HepG2 ENCFF106ELT 312 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 312 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 214 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 150 bp overlap
ZNF600 2 datasets
ChIP HEK293 ENCFF785JSX 217 bp overlap
ChIP HEK293 ENCFF785JSX 239 bp overlap
ZNF816 1 dataset
ChIP HepG2 ENCFF294VPD 69 bp overlap