chr19 : 7,512,387 – 7,512,812
425 bp 95 TFs 3 linked genes
This 425 bp open chromatin element is linked to ZNF358, ENSG00000267952, and MCOLN1 and is bound by 95 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF358 3.3 kb Proximal Proximity
ENSG00000267952 5.3 kb Proximal Proximity
MCOLN1 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:7,507,387 – 7,517,812
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
AFF4 3 datasets
ChIP HeLa GSE40632.AFF4.HeLa 234 bp overlap
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 219 bp overlap
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 286 bp overlap
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 154 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 227 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 223 bp overlap
ASH1L 1 dataset
ChIP K562 ENCFF808EMX 263 bp overlap
ATF3 1 dataset
ChIP K562 ENCFF921JQW 128 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 425 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 330 bp overlap
BRD4 3 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 250 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 198 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 186 bp overlap
CC2D1A 2 datasets
ChIP K-562 ENCSR343IFJ.CC2D1A.K-562 292 bp overlap
ChIP K562 ENCFF567XUT 242 bp overlap
CEBPB 2 datasets
ChIP HeLa-S3 ENCFF722WEG 260 bp overlap
ChIP HeLa-S3 ENCFF722WEG 53 bp overlap
CEBPG 1 dataset
ChIP K-562 ENCSR490LWA.CEBPG.K-562 50 bp overlap
CHD4 2 datasets
ChIP 501-mel GSE134848.CHD4.501-mel 279 bp overlap
ChIP RH5 GSE155861.CHD4.RH5 264 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 150 bp overlap
CREBBP 3 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 242 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 96 bp overlap
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 250 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 140 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 196 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 255 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 324 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 369 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 400 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 210 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 340 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 310 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 108 bp overlap
E2F1 1 dataset
ChIP K-562 ENCSR720HUL.E2F1.K-562 277 bp overlap
E2F4 1 dataset
ChIP MCF-10A ENCSR000DOR.E2F4.MCF-10A 135 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 236 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 233 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 152 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 241 bp overlap
EP300 1 dataset
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 191 bp overlap
ESR1 5 datasets
ChIP T-47D GSE148277.ESR1.T-47D 254 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 334 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 338 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 189 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 82 bp overlap
ESRRA 1 dataset
ChIP K562 ENCFF968PEP 365 bp overlap
FOS 2 datasets
ChIP K-562 ENCSR000FAI.FOS.K-562 194 bp overlap
ChIP K562 ENCFF951GBI 222 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 256 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 239 bp overlap
FOXM1 11 datasets
ChIP HEK293 GSE60032.FOXM1.HEK293 192 bp overlap
ChIP HEK293T ENCFF914UUM 130 bp overlap
ChIP HEK293T ENCSR831EIW.FOXM1.HEK293T 264 bp overlap
ChIP HeLa GSE52098.FOXM1.HeLa 388 bp overlap
ChIP Ishikawa ENCFF578VDD 139 bp overlap
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 314 bp overlap
ChIP K-562 ENCSR429QPP.FOXM1.K-562 425 bp overlap
ChIP K562 ENCFF255RHV 338 bp overlap
ChIP K562 ENCFF490XGT 368 bp overlap
ChIP MDA-MB-231_THIOS GSE40762.FOXM1.MDA-MB-231_THIOS 153 bp overlap
ChIP OE33 ERP013564.FOXM1.OE33 114 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 173 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA2 2 datasets
ChIP ESF GSE108408.GATA2.ESF 277 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 299 bp overlap
GATA3 6 datasets
ChIP MCF-7 ENCFF352QVM 147 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 193 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 154 bp overlap
ChIP MCF-7 GSE128445.GATA3.MCF-7 140 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 140 bp overlap
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 96 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 182 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 255 bp overlap
ChIP DE DE-GATA4-1 341 bp overlap
ChIP DE DE-GATA4-2 400 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 341 bp overlap
ChIP DE DE-GATA6-2 395 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 273 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 239 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 321 bp overlap
GFI1B 3 datasets
ChIP K-562 ENCSR509GDT.GFI1B.K-562 334 bp overlap
ChIP K-562 GSE117944.GFI1B.K-562 199 bp overlap
ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 245 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 373 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 321 bp overlap
ChIP K562 ENCFF968WBH 160 bp overlap
HDAC2 4 datasets
ChIP K-562 GSE140325.HDAC2.K-562 110 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 294 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 280 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 297 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 407 bp overlap
ChIP K562 ENCFF348IBL 393 bp overlap
ChIP K562 ENCFF771OHZ 244 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 178 bp overlap
KDM1A 8 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 249 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 311 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 269 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 306 bp overlap
ChIP K562 ENCFF128TYE 425 bp overlap
ChIP K562 ENCFF133OLU 404 bp overlap
ChIP K562 ENCFF934ZRG 404 bp overlap
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 164 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 180 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 129 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 271 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 355 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 259 bp overlap
LIN54 2 datasets
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 204 bp overlap
ChIP HepG2 ENCFF662XDE 405 bp overlap
MAZ 1 dataset
ChIP K562 ENCFF809XHP 394 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 313 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 341 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 320 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 253 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 205 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 201 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 404 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 387 bp overlap
MYBL2 3 datasets
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 216 bp overlap
ChIP K-562 ENCSR162IEM.MYBL2.K-562 311 bp overlap
ChIP K562 ENCFF299JBQ 142 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 389 bp overlap
NELFA 1 dataset
ChIP K-562_HS GSE112379.NELFA.K-562_HS 198 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 297 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 249 bp overlap
NEUROD1 6 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 395 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 377 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 402 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 297 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 326 bp overlap
ChIP K-562 ENCSR986CDX.NEUROD1.K-562 179 bp overlap
NFATC3 2 datasets
ChIP K-562 ENCSR051OUX.NFATC3.K-562 259 bp overlap
ChIP K562 ENCFF078EKB 421 bp overlap
NFYA 6 datasets
ChIP HeLa-S3 ENCSR000DNS.NFYA.HeLa-S3 263 bp overlap
ChIP Hep-G2 ENCSR124APT.NFYA.Hep-G2 143 bp overlap
ChIP K-562 ENCSR000EGR.NFYA.K-562 283 bp overlap
ChIP K-562 GSE26439.NFYA.K-562 258 bp overlap
ChIP K562 ENCFF666BET 233 bp overlap
ChIP K562 ENCFF732HOX 255 bp overlap
NFYB 9 datasets
ChIP GM12878 ENCSR000DNM.NFYB.GM12878 212 bp overlap
ChIP HeLa-S3 ENCFF854TNJ 260 bp overlap
ChIP HeLa-S3 ENCSR000DNR.NFYB.HeLa-S3 217 bp overlap
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 215 bp overlap
ChIP HepG2 ENCFF174VYX 254 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 291 bp overlap
ChIP K-562 GSE26439.NFYB.K-562 269 bp overlap
ChIP K562 ENCFF709RXX 240 bp overlap
ChIP WTC11 ENCFF751ZTQ 235 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 320 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 425 bp overlap
PHF8 1 dataset
ChIP K-562 ENCSR000AQH.PHF8.K-562 192 bp overlap
PKNOX1 3 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 351 bp overlap
ChIP K562 ENCFF236IUS 350 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 277 bp overlap
POLR2A 1 dataset
ChIP HCT116 ENCFF849NGT 425 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 195 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 330 bp overlap
PRDM1 1 dataset
ChIP HeLa-S3 ENCFF893HDJ 265 bp overlap
RBM25 2 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 205 bp overlap
ChIP K562 ENCFF248CGR 264 bp overlap
RCOR1 2 datasets
ChIP K562 ENCFF216EEJ 297 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 145 bp overlap
REST 3 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 205 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 208 bp overlap
ChIP LNCaP GSE119385.REST.LNCaP 425 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 425 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 316 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 251 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 240 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 323 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 166 bp overlap
SP2 4 datasets
ChIP HEK293 ENCFF181QXT 382 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 295 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 147 bp overlap
ChIP HEK293T ERP007114.SP2.HEK293T 239 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 209 bp overlap
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 178 bp overlap
SUPT5H 2 datasets
ChIP HeLa GSE125534.SUPT5H.HeLa 197 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 130 bp overlap
TBP 4 datasets
ChIP K-562 GSE55306.TBP.K-562 278 bp overlap
ChIP K562 ENCFF901UYM 240 bp overlap
ChIP K562 ENCFF901UYM 363 bp overlap
ChIP hESC GSE122298.TBP.hESC 241 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 164 bp overlap
TEAD4 6 datasets
ChIP K562 ENCFF673NIK 301 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 309 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 251 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 327 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 266 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 226 bp overlap
TFAP2A 2 datasets
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 142 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 255 bp overlap
TFAP2C 3 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 142 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 112 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 122 bp overlap
TP63 1 dataset
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 133 bp overlap
YY1AP1 3 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 334 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 369 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 301 bp overlap
ZBTB6 3 datasets
ChIP HEK293 ENCFF881ECZ 85 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 252 bp overlap
ChIP HEK293 ENCSR619OUC.ZBTB6.HEK293 292 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 422 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 258 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 178 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 384 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 292 bp overlap
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